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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000183_pilon:445399..448864- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_002709 ID=XLOC_002709|Name=XLOC_002709|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3466bp|location=Sequence derived from alignment at sc0000183_pilon:445399..448864- (Clytia hemisphaerica_ch_hm2_pilon)
ATTAAGTTGCAGAAGTCGAAGCAAAATATTGCTCGCCTTTCAAAGGAATT
AGAAATTTTAAAAATTAAGCATACAATCGCCAGCAATGATTGCTTGGCAA
AAGAATCAAAGATTCGTCATTATAAAAAAGAAAACGCAGATTTGTGCGTT
AAACTTGCAAAGGAGAAGTAAGTACTTTATTTTGTTGACCTTATTAGCCA
AATTATAAGCAAGACTTTTATGACTTTATTCGTACGTCAACGAATTAGAA
TCTTATTGTAACAGACCTTGATTAGTTAAAGCATTCCAGTTTGAACTTAA
AATTCAAATTATCGAGGTTGGCTTACTGTTCGATTATCACATTTGGAGCC
CCATTTTCTGGCATTTGTGAATCCATTTTTTCTTCACTTATTTACACCCC
TGTGTCATAGACCCGATGGGACACTCGACCCACTGGAATATTTGGCCAAA
AATTCGTCCCAGTGGGGAGAATAGCCATCCCTACTTGGATATCGAAAGAA
ATTTTCATCCCCGTTATAGGAAGAAGTTGCTGCAAGACAGGGGTGTCATA
TTTGCAATCATCCTGATGTAATGTGGTCTTTTCTTTTTAGAGCCGTCAAC
GCATCGTTGAAAAGAATTCCCAAGCCCAAGCAGATTGTCAAGTCACCTCA
ACTGTAAGAATTTATGAAAAGACTTTACAATTTGAAAGTGCGTATGCACT
GTCGATGGTTCCAAGCGAATATACCCATTTGTTATGATTTATTTCTACTG
GTGTTATACTTTTCCGGAGAGTGGGTGGTACATTTGGCGGGCAATGACTT
AACCTTTCTCCTATTTAGCTTAAAGTTACACATTTTGAATTTTTTCAATT
ATTCTCAGTTTAATTAATCAAACTTTTCTTTACAGGATTGTCGAATCAAA
AGGTACATCTGAAGTAGTATTTAAATCACGGGACTGGCGCTTGAATGACG
CATCACAGTAAGTTTCAAGGGGACATTTTCAGATTGATAATAGGAATTAG
AATATGGTGTTCCAGGAATAATTCACCACAGTGTCAATAAGTAATGAATA
CTTCAAAACGGTAAAACCACAAACTCAACAACTCCAACAAACAGGTCTAC
TTCTAATAATGGTGATTCTTGTTTTAGGAAAATTACTGTCGTAAGAGAAG
TTTGTGGTGGACCTGAACCAATCCAAAAACAACTATCATCACAAAACAAG
TTTCAACCAAAAAGCAAATTGCTAATCCCGTAAGTAGTATCAAACTTTCA
CTGAAACAAGTTTTTTTTCTTGATATTACCCTTGTTCTCCTTTTTGGTTA
GAACTTTTATTAAATCAAATTTTTCACTGTTCGAGTTCAGATTAGATGTG
GATTCAGAAACGCCCTAAAATTACATGGTTTCTAAGGACAGGCAGATTCA
TACCCCTACAAGGGTGGTTTTTTCTATCTAAGCTTCTATCAGTTGTTTTA
ATGCCAGATATGATAACATACATGGATGCAATGTTGCTACCTACTTTTAA
CAATGTTTCGATTTTATTTTTAGGAAGCCCGTACAAATGAACGGGTATCT
TTTTGTGCCGGCCGAATACGTGCAATATATGCCGTAAGTTAAATAGTGTT
TTGATTTTCTTTTTAACAAATTTTCCATTTTTTAGCTACTAGCGGTATTA
TAAAATGATTTTCTATGTACATATTATTTGTTTTCATCGAGGTCTAAACT
TCGGTGATTCATAATGAAACAATTATCTTTTGAGCACTAAATTTTTACCC
AGCCACTTAATATATTCAAAGAATGATTGTTTATTTATTTTTCTCTTGTA
GTGGCTTTGGATCACTCGAAGTTCCAAAGGTGAAATGTTCCCAAGACTTC
CGGTTGAACAGGTAATTGATAAAGTTTTAGGTTCAAGATGACAGAAAAGA
GGACTCGGACGAAGAGCAAGATTGGGGGAAACGGTTCCTTTTAGATAGAA
TAGACCTTATCATAAATGACGTCACGAACATCACTTGCTTCGTTTTGAAA
TTATTGCCGTGGTGATTAACTCCCAATGGATTTTATTAAAACTACTTCCT
ATTCATGAAATAATCATTTAATGTCTCAAAGGTCATAATCACCATAGTAA
TTGTTTGAATACGAGGCAAGTGATGTTTGTGACGTAATTTATGAAAAGGG
TTTATTCACAGGGCTGACAGTGATTTGGTTTTGGAAAAATTTCAAGGTCG
ACCCCATTTAATTCCCCAGCCCAATTCATTGGTTCTGAGGATCAAAATAA
TTCTTCTAGAGTCACAAAAATTGCTCATTATGAAAATCATGAACTCTTAT
CTATTCTTTCTTTTTCAGTGCCAAATCGCAGGAAAAAATCAATCGAAAAA
TTATCAAGCCAATAAAGAAAGGTAAATTCATCTTTAGTGTGCTTATCAGT
ATTTTGAAAAGTTTAGTTGTACCCAGTGGGAGAATTATTCGTCTTTGCCC
ATTTCAAAATGCAATGTATCCCAAGAAGAGAGTCATAATAATCTTACTCC
TTTGCGCACGCTGTTTCTTTTGAAGACATGATTTTCAGTCACTTCGAGCA
ATTTGAAGTCCTCAAAACTTGTAGCTTTTGATTTAGAAGATGATTTTGGT
ACCATTCAAAAGTTCTTGTTACATATACTCTTTCTAAAAACATTTGGTTT
ATGCCCCTTTAAATAAAGTGGTCAGGAGCTATGGCCTCAGTATTATATAC
GCATTAAAATTTTTTATAGATTATCTTTTCAGGTTTGTTTTGATTTTTCT
TGTTTGCCACCTTTTTTTTTTTTTCCTTTTACAAGTCTCATTATCAGGTC
TTTGACATTCGTCGCATTCATATGTATATGCTATAAGATAATACTATGTA
AAAATAAATTATGCTAAATATATATAGTAGGATATCATTATATACGCATA
TACGCGTCCCTTGTGGTCTAAGGGTTAATGGGTACTTTACTCTCTTATCT
TGGCAAAAAACTTCACATCAACCTTCACAAACAAAATTGATCTTCTTTAT
TCTTCTCAGAGGCACCTGTAAATAATTCTTACGAAAGCCAATTGGTTGAC
ACCCCTGCATTGCCCATAACTGTGGCTAAACCAAGCTGTGTCAAAATTGA
CAGTGTCGACTGGGCAGACTTCGAGTAAGTTTTATTTCTTATTCTATCCT
GATCGACTCAACTTAAAAGTCAAGAAATGTAGAACTAAAATCCCTAGCTC
CAGACGGCGTTTTTCATTTGATTTAACTGATTTAACTCATTAACAAATTT
CAACCGAAATCCGTCTATTAAGATTCTGAAATCCAATAGAAATCCAACGT
GTACTAATAGTTTTGCGTTGAAATACAGAACTTTAATATATATAACTTCG
GATACTATTTTACTTCTTTTGGCATAGAAACTGTTTTTCATTGTTTTTCT
CTCTGTTTTTTTTTCAGATATAACGATGACCAGAAGATAGACTACAATGA
AATCATCCAATTTTGA Coding sequence (CDS) from alignment at sc0000183_pilon:445399..448864- >XLOC_002709 ID=XLOC_002709|Name=XLOC_002709|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1482bp|location=Sequence derived from alignment at sc0000183_pilon:445399..448864- (Clytia hemisphaerica_ch_hm2_pilon)
ATTAAGTTGCAGAAGTCGAAGCAAAATATTGCTCGCCTTTCAAAGGAATT
AGAAATTTTAAAAATTAAGCATACAATCGCCAGCAATGATTGCTTGGCAA
AAGAATCAAAGATTCGTCATTATAAAAAAGAAAACGCAGATTTGTGCGTT
AAACTTGCAAAGGAGAAATTAAGTTGCAGAAGTCGAAGCAAAATATTGCT
CGCCTTTCAAAGGAATTAGAAATTTTAAAAATTAAGCATACAATCGCCAG
CAATGATTGCTTGGCAAAAGAATCAAAGATTCGTCATTATAAAAAAGAAA
ACGCAGATTTGTGCGTTAAACTTGCAAAGGAGAAAGCCGTCAACGCATCG
TTGAAAAGAATTCCCAAGCCCAAGCAGATTGTCAAGTCACCTCAACTAGC
CGTCAACGCATCGTTGAAAAGAATTCCCAAGCCCAAGCAGATTGTCAAGT
CACCTCAACTGATTGTCGAATCAAAAGGTACATCTGAAGTAGTATTTAAA
TCACGGGACTGGCGCTTGAATGACGCATCACAGATTGTCGAATCAAAAGG
TACATCTGAAGTAGTATTTAAATCACGGGACTGGCGCTTGAATGACGCAT
CACAGAAAATTACTGTCGTAAGAGAAGTTTGTGGTGGACCTGAACCAATC
CAAAAACAACTATCATCACAAAACAAGTTTCAACCAAAAAGCAAATTGCT
AATCCCGAAAATTACTGTCGTAAGAGAAGTTTGTGGTGGACCTGAACCAA
TCCAAAAACAACTATCATCACAAAACAAGTTTCAACCAAAAAGCAAATTG
CTAATCCCGAAGCCCGTACAAATGAACGGGTATCTTTTTGTGCCGGCCGA
ATACGTGCAATATATGCCGAAGCCCGTACAAATGAACGGGTATCTTTTTG
TGCCGGCCGAATACGTGCAATATATGCCTGGCTTTGGATCACTCGAAGTT
CCAAAGGTGAAATGTTCCCAAGACTTCCGGTTGAACAGTGGCTTTGGATC
ACTCGAAGTTCCAAAGGTGAAATGTTCCCAAGACTTCCGGTTGAACAGTG
CCAAATCGCAGGAAAAAATCAATCGAAAAATTATCAAGCCAATAAAGAAA
GTGCCAAATCGCAGGAAAAAATCAATCGAAAAATTATCAAGCCAATAAAG
AAAGAGGCACCTGTAAATAATTCTTACGAAAGCCAATTGGTTGACACCCC
TGCATTGCCCATAACTGTGGCTAAACCAAGCTGTGTCAAAATTGACAGTG
TCGACTGGGCAGACTTCGAAGGCACCTGTAAATAATTCTTACGAAAGCCA
ATTGGTTGACACCCCTGCATTGCCCATAACTGTGGCTAAACCAAGCTGTG
TCAAAATTGACAGTGTCGACTGGGCAGACTTCGAATATAACGATGACCAG
AAGATAGACTACAATGAAATCATCCAATTTTGAATATAACGATGACCAGA
AGATAGACTACAATGAAATCATCCAATTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183_pilon | genome | sc0000183_pilon:445399..448864 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-765:49 |
| Aaloc | 604-714:456 |
| Aaloc | 550-600:1148 |
| Aaloc | 490-546:1665 |
| Aaloc | 430-486:1943 |
| Aaloc | 328-426:2339 |
| Aaloc | 256-324:2581 |
| Aaloc | 193-252:2876 |
| Aaloc | 25-189:3467 |
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