TCONS_00073810 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073810
Unique NameTCONS_00073810
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073810 ID=TCONS_00073810|Name=TCONS_00073810|organism=Clytia hemisphaerica|type=transcript|length=3124bp
caaaatatgaaaaataaaatctacaacAATGGAAACATTGATGATCAATA
CACACAAACAGTCCTCCAAACTTAGGGAGTTCACAATGGATGAATTGTGC
GTTTTGTTGTTGCGTTGGTATAAATTGGCCCAAGTTCGGAGGCTCGATGT
CAACCCAACCACACCTGCGAAGAAAAGGCTTGAAATTCATCATACGCAAC
CATGGTCAAGAAGGAAGAAATCAATACCATCCAATACTACAGTTTGAAAG
CTGTCGATGGtgaaaaagtgaagaaattacTTCGAAACACAATCAATGCT
CTTTCAGAGAAAGAATTTTCATCTGAAGATGGTTTGACCAGGTTTGTCAC
AGACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTTTCAC
AGCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGATTTG
GACATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCCCTCT
GAGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAAGCCT
TCAATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTCCGAT
GAAAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAACTAA
AATGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAGACCA
TTGACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAATGGA
TTGACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGAGCAC
TTCAATAACAACATCTATCAAAATCACTAATAAGGTGCTTCATCCTTCAA
ACAAGACATTGATCAACACTTACCTACACTTTGGGCGTTGCGTCGCCATC
ATTGACGATAAAGTCATCCTGCACTATGGTGAAGAATTGCAAAAATATTT
CGATCATTTCGGTGTTGAGTTGGTGAATTTGATCCATGGTGGTAACGAGG
TCGACAAAGATATCAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAAACAA
AATGGTGTGTCGAGAAACGAACCTATCCTTATTGTTGGCGGGGGCGTTAT
CTCAGATATTGGTGGTTTTGCAACCGCCCTTTATCATCGAAATACGCCCT
ACGTCATGTTGTGTACATCCATTGTATCTGGTATTGACGCCGGACCTTCA
CCCCGAACATGTTGTGATGGATTCGGGTTTAAGAATCTGTACGGTGCATA
TCACCCGCCCATCTTGACGCTGACCGATCGTTCTTTCTTCAAAACACTTC
ATGAAGGCTGGATTCGACATGgAATCGCTGAGATTATCAAGATGGCTGTT
GTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCGATT
GATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCGAAA
CGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGTTCG
GAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTACGG
CCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACGGAC
ACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTGGAA
AACTTCATCACGGCAGAGGAATGCAGCCGTATTTTACGTTTGATCAGTAC
AATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGGTTG
CTGCCGCAAACACCAAGGTCATCGAGAAAAGAGGTGGCAATCTTTGTGCA
CCAGTACCCAAAGAACTTGGTCAATGTGGTTACATCAACGAGTTGTCACG
TGATACCATTAACCAGACATTGGATGATTACAAAATGCTGTGTCAGCAAT
TTCCACGATCAGGACGAGGAGTTGATGTACACTGTCGCGATGTAGGGCTG
GAAGATCCTTCTACTGTGGCAGGTTATGGAGTAAATGATGTTTTGCAATC
TAATGGTGCACCAAAGCATCCAAACGGAAGTGCAGAATCCAACCCTCCGT
CATCTTACTCCGAATGGATCAAAACGGTTCAAACAGAGCGGAACAGTGAA
TGGCAAATGAACGTCACTTTCCAAAAAGCCCTGGATACTGAATCCCCTCC
TGATTTCAATCACTTCAAATTGTTTCATGATGGCGTCGAAACATACGCCA
TGGCTCAAACGACCATCCCTTCAAAAGGTGTCCAAAATATCGCCAATTTG
ACGCAAAACAACGAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTGAGAG
TCAATTCCTAAAAATGCAATGCCAAATCAAAGGAGCTCGCAACGTGCTGG
ATGTCGGTACGTTTACTGGAATGTCTGCTTTGGCGATGGCTGAAGGAATC
CCCGATGATGGTCAAGTTGTCACTTTAGAATGTGATGAAAAAATTGCTGA
CGTTGCACAACAAGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATCCGTC
TCGAGTTAGGAAACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAACGGC
CAGAAATTCGACGTCATTTTTCTTGACGCCGATAAAGAGAATTACATCCT
TTACTACGATCTAGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGAATTA
TCTTAGCTGATAATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGATTTT
CGAAGTCAGAAGCTTCACGAGTTCAACCAACATGTGAAGAATGACGATCG
GGTGGAGCAAGTTGTTTTGACCGTACGGGAAGGGATCTCTATCATCAGAA
GGCGTTAAATAAACCGCTCATTCATACAGACACATTCAGAgaagaaattt
tagatttcaattACATATTCCAAACAACATTATTATTTTCAcgttatttt
ttgtaaataattttttttgaaggttTCACCAAATTCTTGCATCAGCATTT
TTATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTNTTCTTTTCTTGC
ATCAGCATTTTTATGTCACTTCTTTTATCAAAGaacagaaaaattttgaa
ttctaaATTTTGTAAATGATTTTCCTTTATATCTGAAGTAATCATTGTCA
AGCAGTTAATAGGTTGTATTCTGT
Run BLAST on NCBI

transcript from alignment at scaffold_98:8005..26839-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073810 ID=TCONS_00073810|Name=TCONS_00073810|organism=Clytia hemisphaerica|type=transcript|length=18835bp|location=Sequence derived from alignment at scaffold_98:8005..26839- (Clytia hemisphaerica)
CAAAATATGAAAAATAAAATCTACAACAATGGAAACATTGATGATCAATA
CACACAAACAGTCCTCCAAACTTAGGTATTTTTTAATTAGTTACAATTCA
TTTTGATATAATTGTGTACACTATAAGGTATCATTGCTTCGGCCTCCTCC
ATCCCAACCTAGCCCTAAAAGGCGCTACAACTAGAATGTCCCTATAAATA
GCTGATGACTGGATTTCAGGGAGTACTCTCCACCTGGGTAGTAACGAATT
TAGAACAAGTTATTCATTCCTACTACTTCATAACTGTGTTGTGAATCTGT
GTTGGACCCATCGACGGGGTCGTTTAAATTTATTATAGACACTGGATAAA
CAACAAGTTAGTTTTTCATTGATTGTCCTCAGTACAGGACACTCTCCTTC
CTTCATTAAAACATTTTCCGTAGTATTTTAATCTCTTTTTCCATCAAAAC
TCGGTCTTTCAATTCCCAAATGAGAATTAAATTGTTCATTAGAGAGGCAA
GAGCATCAAAATAATTGCTGACTATGTGTTGTTTTTACGTTTTTCCAAAG
TGAAGCCGAGACACTCAAGTCAAATATATGAATGTTAAGTGGGGCGCAAA
CCGGCCAACATGTTGGTACGGTTTGTGGTGACCCTTTATAAAAAAACAAC
CAGCCAACATTACGAAATGTTCATTCATTTGTTTTTTACTTCCAATGAAG
AAGCATTCGAAAAACGTAAAAAAACGTTCGAAAACTTAAATGTTGGCCAA
CATGTTGGTTACCCAGTGCAAACCGACAAACATGCAAATTTTGGCGGAAA
TGTTGGCCAACATTTTTTGAGATTTTTTTTTCTTCTCGAGCATGTTGGTG
CCTACTGCAAACCGGCCAACATTGTTGGTCAGTGGATGTTGGTCGAAATG
TTGGCCAACATATTGGTAGGTTTGCGCCCCACTTTAGAACGATATTGCAA
ACTTACAATTCAGTATCATTTCAGGCCTTTTGTTCGATTTTTCTTGCCTA
ATGATTTTTTGTCACAGCAGATTCATTACAACTCCCAAACACAAGACATC
CCTTTTTACGCAGATATCAATAAAAGTTCTTAGGAACACCTAAAACATAA
TAGGTGCTATTGGGTATTTCAGATATTAAATTTCCACTATTTTTCCTAAC
TTGTTATTAATGTATCCTCACATGGAAAGTTGTTTTAAGAATTTGTCGAT
TTGCTGAAATGTAAAAGACTCGTGTCTTTGTGCAGGATGGTGCAATCGCG
ACAGTTAAGCTATTTGGAAACAAAAGAAAGGGATGTGTACATACGGCTTG
TCATGTTTCGTTCAAGTTCATCACCTCTTCTCAGTTTGTAGTTTGTTTTA
AATTTCAACAATTTTGTAGTCGTTTTCATTGGAAATCTCATTTTGTCATA
NGTTTTAAAATTCAACAATTTTGTAGTCGTTTTCATTGGAAATCTCATTT
TGTCGTAGGTAATTTCTATTTATTTTTTAGAGATTGGATAGGACCGCTTG
AAGGAGATTTGGCTACAGTTTAGACGGCCCACTTTTTGCCCTGCCTATTC
TGATTGTGAATTAATGTGAGCTCTCTAAAGTCAATGCAATGCCCTCTTTT
GACGTCAATGCAATGACTTGATTCAATCTTTTATAAGCAACGATTTTAAC
TGCCAACTTTGCGCTAACTTTTTGCCTATTCTAACAATTAGAATAGGCAA
GGCAGAATAGAATAAGAAGGAGTGCAAATCATAGAAAAAAAAAACAAATA
TTACATCATTTTATAATTTGAGACAAACTAAATCTATTTCAAAACAATCA
AACGGGCAATACCTGCCTGTCTAAAAGCAGTTTTTTAGAAGTTATCAGAT
ATTAATCGTGATATGATAATATACGAGTTGCGAGTTACGAGTTACGAGTT
ACGAGTTGCATTTAGAACCACGAGTTGCGAGTTACTTTTTACGAGTTACG
AGTTACGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAAGAACTGTAG
AGAAAAGTGCTCCCGAGCGGGGGTAATAGGTTTGGATGCGTTGTTACTAA
AAAAGGTAACATGAGGTAACACAGGGTAATAGGGGGTAACAAGGTAACAG
GCTGAGAATGATGGCTCTAAGGGGTTGTTTCACCTTTCAGCTACAAACAT
CATATAACAATAACGAAAAAGAAATTAAAAAACGAAGGGGAAATAATTTA
TCATAATCAGAATGATTAAAATAACTTATATCTTCTGTGTAGAAAAAAAC
AAAAATTTATATAACGAGAGAAAGAAAATGTTCGCCGCATGCCTCACTCG
TTTTTAAAATGAAAGAAGAAGCCTTGACGCCATACATAGAAAAGTTTTGG
CGCGAAAAATTTAGTAAGACACAAACTCATTTTTGTACGTTCATTATTTT
TTTAAGAACAGTGAATAATGTAAATATGAATTTTGTCAAAAAGTGTCACT
TTGTCTTGAAAATGACAGGTAACGTCCACGTTATTAAAAGTAGCATTAAA
GATGTTTCTCGATAGGAAGAAACACGCGCATTTCCTTTCAAAACTTAAAG
TTATGAATGCTCTGTTTTGTTTTTATACAAAAATGAGCGAAAAAATGTGT
GATTTAAGTGGTTTCACAACTTTAATCACAAAACGTAAACAGTTTGGCTG
AGTTTTCCATGCTTTGCTTTGGGTTTAGCTTTTTATGTGCTGTTATTATT
TAAGATAACAATCTCAGACTTGATTTTAATTTGCAACTCGAACTTTTAAT
TTGCAGCTCGCACTTTTAATATGCAACTCGCACTTAATATGGAACTCGCA
CCTTCAATTTGCAACTCGCACTTTTAATTTGCAACTCGCGAATTTTGTGT
GTTAAGATGCAACTCGTAACTCGCAACTCGCGATTTTATTTTGTTAAAAT
GCAACTCGTAACTCGTAACTCGTAAAAAGTAACTCGTAACTCGTGGTTCT
AAATGCAACTCGTAACTCGTAACTTGTAACTCGTAACTCGCATATGAAAA
ATCCTCTATTAATCCTTCCCTGTTTCTATCTGAGTTTTGAATAGAATTGT
GAAATTTAATCTGTAAAATGTTCGGGCGATTTAAATGTATATGTTTCGTA
GTGCAAGTTCAAATCCGGGAAAAAAGGTCCGACCTTTCTTCTTTATCGGG
TGAATGCATAAATATATTCCTTTCTGAACCGAGAGGTTCGCAACAGGCAC
GATGCACCGGGTACGGAAAATAGGCGGCCGTGGTACCAAATTTAAAAAGC
TTCCGGCCTGTGCTCTGTCAAGAACTTGGCTGCAACTTTTCCGTCTATAG
ACGTTTAAACTTTCTCCAAAAGACGTCTTCCAAATGTTTTAATGAGATTA
GTTTTAACTTTGAGCTTCATNTGAATTTTCTAACAACGATTTCCGTAGCT
TTAGAAGAAAAAATTACATAACATAAAAGCCCAGTTTTTAAATTCCGCCC
AGACAAGCCAAACTGCAAATTTGAACTCAAATTTAATGTCTGAAATCGTT
TCTGAACTCCTTTTCAAGAAAAAGGCGACTTAAACTTTCTCCAAAAGACG
TCTTTCAAATGTTTTAATGGAATAGTTTTAACTTTGAGCTTCATTCTCTG
CAGTCGATTCTCTATCATTCGTACATCATAGTAGGGGGAATTTTGTTCGA
TTTTTTGGAATCGCTTGACTGTTTTGTTAGTAGCACTTGTTATACATTTT
TGGAAAGCTAAGGGGTAGGGGAATCGAAATTACTATGTTTCCAATTTTTT
TTCGGACACTTTGGTGTGATTTTCGGACAANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAATTGGAAACATAGTAA
TTTCGATTCCCCTACCCCTTAGCTTTCCAAAAATGTATAACAAGTGCTTC
TAACAAAACAGTCGAGCGATTTTACACAATGCCCTCTACCTCAGGTAAAA
TCTGTGAACAAGCCTCTACCGCTTTACTGCATAACCACTTTTTTCCCTAG
CAACTTTTATCAATTTATTCAAACCTTGACCTGACTGATTGATAAATGGC
CAGCGATGGAGGTCACCAAAATAATTTTGTCACATTTAAAGTCACGTGGA
AGTTCAGGCTAAAGCTTGTTATCGCCGGATTTTAAAAAACACTCAAAAAA
TTTTTATCCAAACTTACGTAAGTTTCATGGCCTGGGAAATTCTCTTTTCT
CTTTGTTTACTATAAATCTTGCTTCCTGATTGGTTCATTTCAAAAGTCAT
TTATGTGATACTACATTATAAGATTCACCAATATTCACAGCAGTATTGTT
ATCTTGAAACTTATCTTTATAATTTATCGATCACACCCATTGATTTCAAA
GCCTCGAAGTGGCTAGCTCTAAAACTCTTCTAATTCGGTTTTAACTACGT
TGACCCTGATTGCTCGAATCTCAGTAATCCAAGGCCTAGTGTTCTGTGTC
GAAATGTATTGAGAATTTTGGTTATTTCCTCGTTTAAAAAAATTTGAAGT
TCGGGCGAGAAAGATGCTCTCTAAGTCTAGCGTTAAAAATCAGAGTTAAA
AATCTATCCTCCCCCTTCCAACCTAAGTTAGAGCACTTCCAAATCGTAAG
TGGCTATAAGATTTCACGAGGATTTCTCTTTTATCTCAAATGTAATGACC
TTGATTGTTCTTTCATTGTTCTTATATTTTGAAGATTTTAAGTCTAATTC
TCATAAAACTGTTCTTTAAAAAAGTCTAAATCTTGGAAAAAGTTATCTAA
CATTTAACATTTAACCTACTCGACACTCCTTGGCAAACTATATGATGAAA
TCAAAATAAACGGTAGTTTGATACGTAAGTGTGCATGCGCTTGTGTCGCC
ATTATATATTTTTAGGTTAGGTAATTAAGCGAGAACAACTTTCGTATTCA
AGCGCGATACGCGCATAATTATCATATTTTGACAATAAGTTGATAAGATA
CATTACATAATTTTGATCTTCCTAAACAATATAACTACATAAACAAACCA
GAGGAATATAAAAAGATGGAAAAACAGTTTCTTGAAAACAATGGAAACAC
GGTTAGCCATATACCAGGTCTCTTGCCCTTAAGGGAGTTTATATCAAGTC
AATATATATACGGTATACATTCAAGTCAATATAGGTTTATTTTTTTATCG
CTATACTAAAAGAATCTACATAATTAGCGTGTTGTGACAAAATTATTTTG
TTTCAGGCCTGATTATGCGCAAACCTTAAGGGTTTATATTTTGGGTAAAC
CTCTCCTATACGAAAAGGTACTTATATTTTCTTGCTCAGAATTTCCAAGC
GATTCTACTGATAGAACTGCATCATGACCGCACCATTAAATGGAAAGCTA
GAGCTCGAGAAATCTTGATTTTACTCGATTTCTGACAGTTTTACAAGAAC
CAATTTAATATCATTGCGCGCGTCATTGCGTTAAGAATTTCTTTTGCTAT
ATATTGCTAAAAAATTGCTCCTTATTCTTAAAAATTGAACTAGTAATCAA
CGAAAAAAGAAAAACAAATTTTCATTTTTATCGTCAAATCATGTAGAAAC
CGTCCGATTTGTATGGCAAGCCGTCTTTTCTGGACTTTCATTTAATGACC
TAATCAACGTCTTTATAATTGAATATTCAATATAAGTGACCTTTGAACTT
TGAGTAATCAGAAAAGTTGTTTTCCCCTCTTTTAATATCCTCTGCATAAA
CATGCAAGCAAAAGAAATCAATTATAAACGCTTCGATTTTATTTCATAAT
TTATGCAACACTCAGTAATAATTATCGTCCAGGTATAATAATTAAGGAGA
CGAATCTTAGATAACATAATTTGAACTGGGTGGCTGCAATCCACCGATTG
AGGTTTTGAAAGTCACCCTGAAAACCTCTTTAAAATAAAAGGTGTCTTAT
AAGTTTATATCGGATAATTTGTGTATACAACATAATAACACGGGGGTATA
TTTTCCCCGACGTTTTATACAGATTGTTTTGCAATTTGACTTTTGGCTTA
ATTTCGTTGAAGGGAGTTCACAATGGATGAATTGTGCGTTTTGTTGTTGC
GTTGGTATAAATTGGCCCAAGTTCGGAGGCTCGATGTCAACCCAACCACA
CCTGCGAAGAAAAGGCTTGAAATTCATCATACGCAACCATGGTCAAGAAG
GAAGAAATCAATACCATCCAATACTACAGTTTGAAAGCTGTCGATGGTGA
AAAAGTGAAGAAATTACTTCGAAACACAATCAATGCTCTTTCAGAGAAAG
AATTTTCATCTGAAGATGGTTTGACCAGGTTTGTCACAGACGTTCTTGAT
ACACGTTCACTCGCTGAATTATTAATCTATGTTTCACAGCTACCAGTTTT
TAGTGAGGAATTCTCGCAATGTTTGACCTACGATTTGGACATCCTTGCTT
TGATGAAGAAATTCAAATATTACAATAACCTCCCTCTGAGTCAAATCCTC
TGCCTGGTGCAGCAACTGCTGGAGAAAAACAAAGCCTTCAATGACACTTT
CGACAAGTCATTCTCCAAACTGGTCAAAAGCTCCGATGAAAACCTCAAGT
TGAAATTTAAGGATTTTTGCAATACAGAGGCAACTAAAATGTCGACTGGC
TTTCTGTACAAAGAAAATCAGACCAGCCTCGAGACCATTGACCCACACGC
AGTCTACCCAACCAGTATTTACCGACATTGCAATGGATTGACGTTGGCAG
CAGCAGATTCGAAAACCATCGAAGCGGTGATGAGCACTTCAATAACAACA
TCTATCAAAATCACTAATAAGGTATGCGAAGATCCTGTTTTGTCTTCTGC
TCCAAGATATTCCTTTTTATATGTTTATTCCATATAGTATACTTTTATTC
TTGATCAAGGCCAAATGATTTGTAAGTTACCAAGTGAAACGATCCAAATT
GCAAATACTTCTTCAAGTATGTCTTAAGACAAAACACTTTTAACGGTTTA
ATAAGTGGTAGAGTCTAACGGCTGTGAACCCGTTTGTGAAATTTCTTTTA
CTGTACTTATTTCTTAGAAATGGGGTATGTCTTGGACTATAGCATAGTCT
AGTGCGTAAGGTGACCTTTTGCCTCTTAACTCGCCAGTTAAATGAGTTTG
GGAGTTTGTNGACCAGGTTTGTCACAGACGTTCTTGATACACGTTCACTC
GCTGAATTATTAATCTATGTTTCACAGCTACCAGTTTTTAGTGAGGAATT
CTCGCAATGTTTGACCTACGATTTGGACATCCTTGCTTTGATGAAGAAAT
TCAAATATTACAATAACCTCCCTCTGAGTCAAATCCTCTGCCTGGTGCAG
CAACTGCTGGAGAAAAACAAAGCCTTCAATGACACTTTCGACAAGTCATT
CTCCAAACTGGTCAAAAGCTCCGATGAAAACCTCAAGTTGAAATTTAAGG
ATTTTTGCAATACAGAGGCAACTAAAATGTCGACTGGCTTTCTGTACAAA
GAAAATCAGACCAGCCTCGAGACCATTGACCCACACGCAGTCTACCCAAC
CAGTATTTACCGACATTGCAATGGATTGACGTTGGCAGCAGCAGATTCGA
AAACCATCGAAGCGGTGATGAGCACTTCAATAACAACATCTATCAAAATC
ACTAATAAGGTATGCGAAGATCCTGTTTTGTCTTCTGCTCCAAGATATTC
CTTTTTATATGTTTATTCCATTTTATAGTATACTTCTATTCTTGATCAAG
GCCAAATGATTTGTAAGTTACCAAGTAAAACGATCCAAATTGCAAATACT
TCTTCAAGTAGGTCTGATATCTAAAGACAAAACACTTTTAACGGTTTAAT
AAGTGGTAGAGTCTAACGGCTGTGAACCCGTTTGTGAAATTTCTTGTACT
GTACTTATTTCTTAGAAATGGGGTATGTCTTGGACTATAGCATAGTCTAG
TGCGTAAGGTGACCTTTTGTCTCTTAACTCGCCAGTTAAATGAGTTTGGG
AGTTTGTTTGCTCCGTCTCTGGATTCTTCGGGAAGTGTCTTCTGTCTCCC
GATCCCTAGCCTGGTTAACCAAGCCGGTTTTTACAAGGCCAAGAAAGATA
CGGCTGAAGACCATATAGCATTATCGGTGCTTTAATGATTTTTATGATGT
ACGGAATTTTAATTTTGCCTTGAAAAAACTGGCTTACGCGAAGCGCGCGT
TCATATTTTGAACGCAGAAGTCGGTGAGACTCGGCGAGCATTTGGCCTCT
TCTAATTGGTCATAATACACCATGTGATAAGAAACGAAATTTTTCGTTTG
TTTTGAAAACGCTTTTCACTTCTCAACGAAAAACTTTTTAAACATATTTT
ATTCTGTACTTTTTGCATAAAAAGAAAGATATGTTTTTCTCTCTCCCTCT
TTTAATTTGCAAAACCTTTATATAACTGAATGAAAGAGAAGTTCATTAAA
TAGGGAGGAGGGTGTGTTTATTTAACAAATTCCTTATTTTTATANNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTGCTTGGAAAAGCTTGAA
GCACTCAATCTAGCCCTTCGGGATTTACAGAAATCTGTACCGTTACCGTA
GCTGCGGCAGACCATGAAGGTCAAGGTGTCTTAACAATGTGTTGACTGAC
TAATGTCGTTCTTTGGGAAGTTGTAATATCGCCGCATTTTTCTTTAACAG
AGATTGCACGGGTCAAAGTTACGAAATATGAGCAATGAGGCATTTTACTC
CAAAACAGATTTTGACACATCATGTCAAAAGCTAGTAATTTGACCTGATA
ATCGAATCAAAAATGAGAAATCAAGTATTTGAAAACTCCCAAAATGGGAA
ATTAAACAAAGAGTGCCTCTGCTGTATTTGAAAGATGACGTAAGATGAGA
AAGAAAAGTACTATCCTACACAACAGGGAATATATAATAGTTCCTGTGTT
GTTATAAAGAAACTCGTGTTAGGTCAAATAGGACGACACTGCATTTACTA
GTCGAAGATTCAGGCCCGAGAATATCCAGGAATTAAGTTTTTTTGAACTG
CCAATTTATTTTGTCACCCAGGTAATAAAGGGTTTTAAGCATCACAGGGG
CAGATTTGAATTGTCTTTAATAAAAATTGCAGTTAAAGCCTTCGTAATTT
CACAAGCACCATGCTTGTGTAATCAAAGTAATTGCCATTGAAGTTAAGCC
TAATTTTGGCCCAAACGCTGGGAAACCAGGTTAGAAGCTGGTAACATCGT
GTATAAGCGGTTTGCATTTGAATTACCAATTGTTCATCTCTCAGGTGCTT
CATCCTTCAAACAAGACATTGATCAACACTTACCTACACTTTGGGCGTTG
CGTCGCCATCATTGACGATAAAGTCATCCTGCACTATGGTGAAGAATTGC
AAAAATATTTCGATCATTTCGGTGTTGAGTTGGTGAATTTGATCCATGGT
GGTAACGAGGTCGACAAAGATATCAAGAGCGTGGAGAAGATTTTAGTGCA
GCTGAAACAAAATGGTGTGTCGAGAAACGAACCTATCCTTATTGTTGGCG
GGGGCGTTATCTCAGATATTGGTGGTTTTGCAACCGCCCTTTATCATCGA
AATACGCCCTACGTCATGTTGTGTACATCCATTGTATCTGGTATTGACGC
CGGACCTTCACCCCGAACATGTTGTGATGGATTCGGGTTTAAGAATCTGT
ACGGTGCATATCACCCGCCCATCTTGACGCTGACCGATCGTTCTTTCTTC
AAAACACTTCATGAAGGCTGGATTCGACATGGTGAGTCATTGAAATACTT
TTCATTATTCCTTATAGTTTTCTTCTATATGCCGCATCTGTATTCGATAT
ATTAACGAACTTTCCTACTTTCAGCTACATAAAAACAACGAAAAGAGCAT
GATTTATTTTGAAATTAACTTATTGTTTAAAACAGCATTGACAAATTTAA
TATGCACTCCCTAAAGACCGTCATCAATCTTGAAAGTGCAGTCAGTCGTC
ACAAATAATGATTATTTCCAATGACGTTGAAGTGTCTTGGCAAAAATAGG
CTGCTACCCCTCTTTCGGTCCCTCTTAGAGAATGAAGTCCTCTGAAAATT
GGACCTGTAAGACTCTTTTGTATTTTGAAATGAGCGTATTTTGAGAAAAA
GTCAGAAAGGAGGAAAAAATCCCTAACTATTTTCCATTTTTTCAGGAATC
GCTGAGATTATCAAGATGGCTGTTGTAAAAGACAAAAGTTTATTCGAATT
AATTGAGAAGGCCGGACCTCGATTGATTCGTACGAAATTCGGAACGGTTG
GCAACACGGACGCCGAATTCGAAACGTTGTGCGATCTTATCATTGGTAAA
GCTATGGAAGGATACGTTCGTTCGGAATACGGAAACCTTTGGGAGACACA
TCAATGCCGACCTCACGCTTACGGCCATACGTGGTCGCCTGGTTACGAGC
TTCCCGCTGGCATGCTTCACGGACACGCTGTTGCCACATGTATGGGGTAT
GGAGCTTATTTGGCAAAGTTGGAAAACTTCATCACGGCAGAGGAATGCAG
CCGTATTTTACGTTTGATCAGTACAATGGAGTTATCCCTTTGGCATGACA
TTATGGATAACCATGATTTGGTTGCTGCCGCAAACACCAAGGTCATNTCA
TTATTCCTTATAGTTTTCTTCTATATGCCGCATCTGTATTCGATATATTA
ACGAACTTTCCTACTTTCAGCTACATAAAAACAATGAAAAGAGCATGATT
TATTTTGAAATTAACTTATTGTTTAAAACAGCATTGACAAATTTAATATG
CACTCCCTAAAGACCGTCATCAATCTTGAAAGTGCAGTCAGTCGTCACAA
ATAATGATTATTTCCAATGACGTTGAAGTGTCTTGGCAAAAATAGGCTGC
TACCCCTCTTTCGGTCCCTCTTAGAGAATGAAGTCCTCTGAAAATTGGAC
CTGTAAGACTCTTTTGTATTTTGAAATGAGCGTATTTTGAGAAAAAGTCA
GAAAGGAGGAAAAAATCCCTAACTATTTTCCATTTTTTCAGGAATCGCTG
AGATTATCAAGATGGCTGTTGTAAAAGACAAAAGTTTATTCGAATTAATT
GAGAAGGCCGGACCTCGATTGATTCGTACGAAATTCGGAACGGTTGGCAA
CACGGACGCCGAATTCGAAACGTTGTGCGATCTTATCATTGGTAAAGCTA
TGGAAGGATACGTTCGTTCGGAATACGGAAACCTTTGGGAGACACATCAA
TGCCGACCTCACGCTTACGGCCATACGTGGTCGCCTGGTTACGAGCTTCC
CGCTGGCATGCTTCACGGACACGCTGTTGCCACATGTATGGGGTATGGAG
CTTATTTGGCAAAGTTGGAAAACTTCATCACGGCAGAAGAATGCAGCCGT
ATTTTACGTTTGATCAGTACAATGGAGTTATCCCTTTGGCATGACATTAT
GGATAACCATGATTTGGTTGCTGCCGCAAACACCAAGGTCATCGAGAAAA
GAGGTAGGCTTTATGTTAGAAAGAAAGTGTATTGTGTCTTTAAACATGGT
GTGCGAGCGTTGCACATTTGCAAAACAGACTATAAAACCACAGATATCTA
AGCCCGAAGGGCTAGATAGGCAACTTTAAGCTTTCTCCAGCAAAAAAAAG
TGAAGCAAAAATTTGACTTTTTAAATTTCGTGCCGATGGATAGGATCTAG
CATTTTAATTGTTTTCGGAGCGCGAGATCAAAAACGTAGGCGAAAAACGC
TATTTCACATCTCTCAAACCGGTGAAATTGCATATTTTAGTCACGTGACT
CTGGTAGGAAATCCTTCCAAAGATGAGCTTCACTTTTTGATAAAAGCCGC
AAATCTAGCCCTTCGGGCTTTACAGATATCTGTGTATAAAACAACATAAG
GTTTCGATGGCCAACATATTTAGAACAAGTGAAGGACAATTTAAGCTTTA
ATGGACTCTAAAACACCCAATTTTTTAGAAAATCTAACAAAAATAATCAC
AAAATGGATGAAATTAAGAACAATTTTTGCCTTACAGCATAAAAGGCTAA
GAACATCCAAAAACAAACACTCAGTTTAAGCCTGTGGTGGCTGTTTGCGA
CAGCTAAAGTGAGATTAATATTGCAAACCACAATATAATGATAGTTATTT
TGTTATCAAAGGTAATAAACAGAGAAACAAACGCTAAGAGGGATAAAATT
TCGAGCAATTGTTGTTGCTGAGAAAATTGATTATATATTTCGCTCGCTCG
ATTGTTTTTCTAGAGCTCAAAACTAGAGTAACATTTTGATAGATTTTATT
TATTTCGAAAGTTATGCAACTGTATTTTTTATCTCTCTCGTGGGTCTTGT
CAATGCAATTATGTGATTACTTCAAAAAGCATTTTACTAAGGAATGAGCT
TCGTGAAAATTCTGATCGAGGTGAGAGAGAGAATGTAGCATGTTTGAGAC
AAGGCATTCGTTGAGAGAATATTTATCGAAATTTTTTTCTGTTTAATTCT
AAAGATTCTTTTGCAACTTTCTCCTGCTACAAAACAAATCTGGCTCTAAA
TATTTTCTGTTATACTGGTGGCGAAGTCTAGATTACCATACATACCCCCT
TCTCACAACGTTTTGAAGTGACACAATCATAAACTGATTATCTAAAAAAT
TGTTTCATCTCTAAAACATTCTTTGAGAACGTTTATCCATCCTACGATAC
AGAAGTGGTTCGAAATTTATGACAATCGTCATCCTACTTTCCCAATTTCG
AACAAAATATTTTTTTCACCACCCCTGTATCAATCACTTAAACTTGTTTT
GGGTTACAAAGGTGTAACTCGTTAATTTACAGTCAAAAATATTGAATCCT
TCTAATGATATTGTATCTTTCTCATCTCACAGGTGGCAATCTTTGTGCAC
CAGTACCCAAAGAACTTGGTCAATGTGGTTACATCAACGAGTTGTCACGT
GATACCATTAACCAGACATTGGATGATTACAAAATGCTGTGTCAGCAATT
TCCACGATCAGGACGAGGAGTTGATGTACACTGTCGCGATGTAGGGCTGG
AAGATCCTTCTACTGTGGCAGGTTATGGAGTAAATGATGTTTTGCAATCT
AATGGTGCACCAAAGGTATGTTTCTTTCTTTGATTTCAATGCTTTTAGAA
ACTGAAAAACTTCCAATTAAACGCAACACTAATTTAATTCAATCGGTTCT
TCATGATCGCGATTCTTAAGTTTTGTTTACTTCTCAGTTCTATTTTCTAT
TAAATCCATGGTCAAACACTAGTCTATGAACCACTGAAATTGTGTCAAGA
TCGGAATAAAAAAGTATAGCAAAATATAGAAATTTGGGCTATTTTGCAGT
CCTCCTTTGGTGTTTACTGCTTCTTCCAAAGAATGATGATGATGGTCATT
TTATGAAAAAATAGTTAAATTTTGTCGATTTAGCCTTTAAATATTCTGCA
TAAAAAGTATTTTTCTTGTTCTTATAGCATCCAAACGGAAGTGCAGAATC
CAACCCTCCGTCATCTTACTCCGAATGGATCAAAACGGTTCAAACAGAGC
GGAACAGTGAATGGCAAATGAACGTCACTTTCCAAAAAGCCCTGGATACT
GAATCCCCTCCTGATTTCAATCACTTCAAATTGTTTCATGATGGCGTCGA
AACATACGCCATGGCTCAAACGACCATCCCTTCAAAAGGTGTCCAAAATA
TCGCCAATTTGACGCAAAACAACGAAATGTTTTCTCCCTGCATGGTTGGT
TCGCTTGAGAGTCAATTCCTAAAAATGCAATGCCAAATCAAAGGAGCTCG
CAACGTGCTGGATGTCGGTACGTTTACTGGAATGTCTGCTTTGGCGATGG
CTGAAGGAATCCCCGATGATGGTCAAGTTGTCACTTTAGAATGTGATGAA
AAAATTGCTGACGTTGCACAACAAGCTTTTTCAGCGTCGAAAGTCGGTCA
CAAGATCCGTCTCGAGTTAGGAAACGCCCTTCAAAGTATGAAGAAATTGG
CAGCAAACGGCCAGAAATTCGACGTCATTTTTCTTGACGCCGATAAAGAG
AATTACATCCTTTACTACGATCTAGCCATGGATGAAGGAGTGTTAGCCGA
AGGTGGAATTATCTTAGCTGATAATGTGTTGTGTTCTCTTTTGTACGACA
AGAAAGATTTTCGAAGTCAGAAGCTTCACGAGTTCAACCAACATGTGAAG
AATGACGATCGGGTGGAGCAAGTTGTTTTGACCGTACGGGAAGGGATCTC
TATCATCAGAAGGCGTTAAATAAACCGCTCATTCATACAGACACATTCAG
AGAAGAAATTTTAGATTTCAATTACATATTCCAAACAACATTATTATTTT
CACGTTATTTTTTGTAAATAATTTTTTTTGAAGGTTTCACCAAATTCTTG
CATCAGCATTTTTATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTNT
TCTTTTCTTGCATCAGCATTTTTATGTCACTTCTTTTATCAAAGAACAGA
AAAATTTTGAATTCTAAATTTTGTAAATGATTTTCCTTTATATCTGAAGT
AATCATTGTCAAGCAGTTAATAGGTTGTATTCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045842XLOC_045842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073810-exon-scaffold_98-1575043694:26765..26839TCONS_00073810-exon-scaffold_98-1575043694:26765..26839Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1575043694:17719..18477TCONS_00073810-exon-scaffold_98-1575043694:17719..18477Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1575043694:12809..13295TCONS_00073810-exon-scaffold_98-1575043694:12809..13295Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1575043694:11949..12394TCONS_00073810-exon-scaffold_98-1575043694:11949..12394Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1575043694:11087..11102TCONS_00073810-exon-scaffold_98-1575043694:11087..11102Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1575043694:9475..9707TCONS_00073810-exon-scaffold_98-1575043694:9475..9707Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1575043694:8005..9112TCONS_00073810-exon-scaffold_98-1575043694:8005..9112Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1510915933:26765..26839TCONS_00073810-exon-scaffold_98-1510915933:26765..26839Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1510915933:17719..18477TCONS_00073810-exon-scaffold_98-1510915933:17719..18477Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1510915933:12809..13295TCONS_00073810-exon-scaffold_98-1510915933:12809..13295Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1510915933:11949..12394TCONS_00073810-exon-scaffold_98-1510915933:11949..12394Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1510915933:11087..11102TCONS_00073810-exon-scaffold_98-1510915933:11087..11102Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1510915933:9475..9707TCONS_00073810-exon-scaffold_98-1510915933:9475..9707Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1510915933:8005..9112TCONS_00073810-exon-scaffold_98-1510915933:8005..9112Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1491911889:26765..26839TCONS_00073810-exon-scaffold_98-1491911889:26765..26839Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1491911889:17719..18477TCONS_00073810-exon-scaffold_98-1491911889:17719..18477Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1491911889:12809..13295TCONS_00073810-exon-scaffold_98-1491911889:12809..13295Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1491911889:11949..12394TCONS_00073810-exon-scaffold_98-1491911889:11949..12394Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1491911889:11087..11102TCONS_00073810-exon-scaffold_98-1491911889:11087..11102Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1491911889:9475..9707TCONS_00073810-exon-scaffold_98-1491911889:9475..9707Clytia hemisphaericaexon
TCONS_00073810-exon-scaffold_98-1491911889:8005..9112TCONS_00073810-exon-scaffold_98-1491911889:8005..9112Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:8005..26839 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.935724	2.30127e-07	0.847067	6.28493e-10	0	0.000569211	0.000635547	1.15375e-06	0	0	5.09558e-08	0	0	0	0	0	0	0	0	2.98055e-06	1.49017e-07	1.01244e-07	0	0	5.25583e-09	0	0	0	0	1.20604e-06
Blast
[Close]
BLAST of TCONS_00073810 vs. Swiss-Prot (Human)
Match: CMTD1 (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.923e-18
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = 1 
Query: 2281 MVGSLESQFLKMQCQIKGARNVLDVGTFTGMSALAMAEGIPDDGQVVTLECDEKIADVAQQAFSASKVGHKIRLELGNALQSMKKLAANGQ--KFDVIFLDADKENYILYYDLAMDEGVLAEGGIILADNVLCS---LLYDKKDFRSQKLHEFNQHVKNDDRVEQVVLTVREG 2784
            M+   ++Q L    ++  A+  LD+GTFTG SALA+A  +P DG+VVT E D +  ++ +  +  ++  HKI L L  AL+++ +L A G+   FDV  +DADKEN   YY+  +   +L  GGI+    VL     L   K D  ++ +   N+ ++ D RV   +L + +G
Sbjct:   85 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQ--LLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDG 255
The following BLAST results are available for this feature:
BLAST of TCONS_00073810 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMTD16.923e-1834.68Catechol O-methyltransferase domain-containing pro... [more]
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