TCONS_00073809 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073809
Unique NameTCONS_00073809
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3101

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073809 ID=TCONS_00073809|Name=TCONS_00073809|organism=Clytia hemisphaerica|type=transcript|length=3101bp
caacAATGGAAACATTGATGATCAATACACACAAACAGTCCTCCAAACTT
AGGGAGTTCACAATGGATGAATTGTGCGTTTTGTTGTTGCGTTGGTATAA
ATTGGCCCAAGTTCGGAGGCTCGATGTCAACCCAACCACACCTGCGAAGA
AAAGGCTTGAAATTCATCATACGCAACCATGGTCAAGAAGGAAGAAATCA
ATACCATCCAATACTACAGTTTGAAAGCTGTCGATGGtgaaaaagtgaag
aaattacTTCGAAACACAATCAATGCTCTTTCAGAGAAAGAATTTTCATC
TGAAGATGGTTTGACCAGGTTTGTCACAGACGTTCTTGATACACGTTCAC
TCGCTGAATTATTAATCTATGTTTCACAGCTACCAGTTTTTAGTGAGGAA
TTCTCGCAATGTTTGACCTACGATTTGGACATCCTTGCTTTGATGAAGAA
ATTCAAATATTACAATAACCTCCCTCTGAGTCAAATCCTCTGCCTGGTGC
AGCAACTGCTGGAGAAAAACAAAGCCTTCAATGACACTTTCGACAAGTCA
TTCTCCAAACTGGTCAAAAGCTCCGATGAAAACCTCAAGTTGAAATTTAA
GGATTTTTGCAATACAGAGGCAACTAAAATGTCGACTGGCTTTCTGTACA
AAGAAAATCAGACCAGCCTCGAGACCATTGACCCACACGCAGTCTACCCA
ACCAGTATTTACCGACATTGCAATGGATTGACGTTGGCAGCAGCAGATTC
GAAAACCATCGAAGCGGTGATGAGCACTTCAATAACAACATCTATCAAAA
TCACTAATAAGGTGCTTCATCCTTCAAACAAGACATTGATCAACACTTAC
CTACACTTTGGGCGTTGCGTCGCCATCATTGACGATAAAGTCATCCTGCA
CTATGGTGAAGAATTGCAAAAATATTTCGATCATTTCGGTGTTGAGTTGG
TGAATTTGATCCATGGTGGTAACGAGGTCGACAAAGATATCAAGAGCGTG
GAGAAGATTTTAGTGCAGCTGAAACAAAATGGTGTGTCGAGAAACGAACC
TATCCTTATTGTTGGCGGGGGCGTTATCTCAGATATTGGTGGTTTTGCAA
CCGCCCTTTATCATCGAAATACGCCCTACGTCATGTTGTGTACATCCATT
GTATCTGGTATTGACGCCGGACCTTCACCCCGAACATGTTGTGATGGATT
CGGGTTTAAGAATCTGTACGGTGCATATCACCCGCCCATCTTGACGCTGA
CCGATCGTTCTTTCTTCAAAACACTTCATGAAGGCTGGATTCGACATGgA
ATCGCTGAGATTATCAAGATGGCTGTTGTAAAAGACAAAAGTTTATTCGA
ATTAATTGAGAAGGCCGGACCTCGATTGATTCGTACGAAATTCGGAACGG
TTGGCAACACGGACGCCGAATTCGAAACGTTGTGCGATCTTATCATTGGT
AAAGCTATGGAAGGATACGTTCGTTCGGAATACGGAAACCTTTGGGAGAC
ACATCAATGCCGACCTCACGCTTACGGCCATACGTGGTCGCCTGGTTACG
AGCTTCCCGCTGGCATGCTTCACGGACACGCTGTTGCCACATGTATGGGG
TATGGAGCTTATTTGGCAAAGTTGGAAAACTTCATCACGGCAGAAGAATG
CAGCCGTATTTTACGTTTGATCAGTACAATGGAGTTATCCCTTTGGCATG
ACATTATGGATAACCATGATTTGGTTGCTGCCGCAAACACCAAGGTCATC
GAGAAAAGAGGTGGCAATCTTTGTGCACCAGTACCCAAAGAACTTGGTCA
ATGTGGTTACATCAACGAGTTGTCACGTGATACCATTAACCAGACATTGG
ATGATTACAAAATGCTGTGTCAGCAATTTCCACGATCAGGACGAGGAGTT
GATGTACACTGTCGCGATGTAGGGCTGGAAGATCCTTCTACTGTGGCAGG
TTATGGAGTAAATGATGTTTTGCAATCTAATGGTGCACCAAAGCATCCAA
ACGGAAGTGCAGAATCCAACCCTCCGTCATCTTACTCCGAATGGATCAAA
ACGGTTCAAACAGAGCGGAACAGTGAATGGCAAATGAACGTCACTTTCCA
AAAAGCCCTGGATACTGAATCCCCTCCTGATTTCAATCACTTCAAATTGT
TTCATGATGGCGTCGAAACATACGCCATGGCTCAAACGACCATCCCTTCA
AAAGGTGTCCAAAATATCGCCAATTTGACGCAAAACAACGAAATGTTTTC
TCCCTGCATGGTTGGTTCGCTTGAGAGTCAATTCCTAAAAATGCAATGCC
AAATCAAAGGAGCTCGCAACGTGCTGGATGTCGGTACGTTTACTGGAATG
TCTGCTTTGGCGATGGCTGAAGGAATCCCCGATGATGGTCAAGTTGTCAC
TTTAGAATGTGATGAAAAAATTGCTGACGTTGCACAACAAGCTTTTTCAG
CGTCGAAAGTCGGTCACAAGATCCGTCTCGAGTTAGGAAACGCCCTTCAA
AGTATGAAGAAATTGGCAGCAAACGGCCAGAAATTCGACGTCATTTTTCT
TGACGCCGATAAAGAGAATTACATCCTTTACTACGATCTAGCCATGGATG
AAGGAGTGTTAGCCGAAGGTGGAATTATCTTAGCTGATAATGTGTTGTGT
TCTCTTTTGTACGACAAGAAAGATTTTCGAAGTCAGAAGCTTCACGAGTT
CAACCAACATGTGAAGAATGACGATCGGGTGGAGCAAGTTGTTTTGACCG
TACGGGAAGGGATCTCTATCATCAGAAGGCGTTAAATAAACCGCTCATTC
ATACAGACACATTCAGAgaagaaattttagatttcaattACATATTCCAA
ACAACATTATTATTTTCAcgttattttttgtaaataattttttttgaagg
ttTCACCAAATTCTTGCATCAGCATTTTTATGTCACTTCTTTTATCAAAG
AACAGAAAAATTTTNTTCTTTTCTTGCATCAGCATTTTTATGTCACTTCT
TTTATCAAAGaacagaaaaattttgaattctaaATTTTGTAAATGATTTT
CCTTTATATCTGAAGTAATCATTGTCAAGCAGTTAATAGGTTGTATTCTG
T
Run BLAST on NCBI

transcript from alignment at scaffold_98:8005..26816-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073809 ID=TCONS_00073809|Name=TCONS_00073809|organism=Clytia hemisphaerica|type=transcript|length=18812bp|location=Sequence derived from alignment at scaffold_98:8005..26816- (Clytia hemisphaerica)
CAACAATGGAAACATTGATGATCAATACACACAAACAGTCCTCCAAACTT
AGGTATTTTTTAATTAGTTACAATTCATTTTGATATAATTGTGTACACTA
TAAGGTATCATTGCTTCGGCCTCCTCCATCCCAACCTAGCCCTAAAAGGC
GCTACAACTAGAATGTCCCTATAAATAGCTGATGACTGGATTTCAGGGAG
TACTCTCCACCTGGGTAGTAACGAATTTAGAACAAGTTATTCATTCCTAC
TACTTCATAACTGTGTTGTGAATCTGTGTTGGACCCATCGACGGGGTCGT
TTAAATTTATTATAGACACTGGATAAACAACAAGTTAGTTTTTCATTGAT
TGTCCTCAGTACAGGACACTCTCCTTCCTTCATTAAAACATTTTCCGTAG
TATTTTAATCTCTTTTTCCATCAAAACTCGGTCTTTCAATTCCCAAATGA
GAATTAAATTGTTCATTAGAGAGGCAAGAGCATCAAAATAATTGCTGACT
ATGTGTTGTTTTTACGTTTTTCCAAAGTGAAGCCGAGACACTCAAGTCAA
ATATATGAATGTTAAGTGGGGCGCAAACCGGCCAACATGTTGGTACGGTT
TGTGGTGACCCTTTATAAAAAAACAACCAGCCAACATTACGAAATGTTCA
TTCATTTGTTTTTTACTTCCAATGAAGAAGCATTCGAAAAACGTAAAAAA
ACGTTCGAAAACTTAAATGTTGGCCAACATGTTGGTTACCCAGTGCAAAC
CGACAAACATGCAAATTTTGGCGGAAATGTTGGCCAACATTTTTTGAGAT
TTTTTTTTCTTCTCGAGCATGTTGGTGCCTACTGCAAACCGGCCAACATT
GTTGGTCAGTGGATGTTGGTCGAAATGTTGGCCAACATATTGGTAGGTTT
GCGCCCCACTTTAGAACGATATTGCAAACTTACAATTCAGTATCATTTCA
GGCCTTTTGTTCGATTTTTCTTGCCTAATGATTTTTTGTCACAGCAGATT
CATTACAACTCCCAAACACAAGACATCCCTTTTTACGCAGATATCAATAA
AAGTTCTTAGGAACACCTAAAACATAATAGGTGCTATTGGGTATTTCAGA
TATTAAATTTCCACTATTTTTCCTAACTTGTTATTAATGTATCCTCACAT
GGAAAGTTGTTTTAAGAATTTGTCGATTTGCTGAAATGTAAAAGACTCGT
GTCTTTGTGCAGGATGGTGCAATCGCGACAGTTAAGCTATTTGGAAACAA
AAGAAAGGGATGTGTACATACGGCTTGTCATGTTTCGTTCAAGTTCATCA
CCTCTTCTCAGTTTGTAGTTTGTTTTAAATTTCAACAATTTTGTAGTCGT
TTTCATTGGAAATCTCATTTTGTCATANGTTTTAAAATTCAACAATTTTG
TAGTCGTTTTCATTGGAAATCTCATTTTGTCGTAGGTAATTTCTATTTAT
TTTTTAGAGATTGGATAGGACCGCTTGAAGGAGATTTGGCTACAGTTTAG
ACGGCCCACTTTTTGCCCTGCCTATTCTGATTGTGAATTAATGTGAGCTC
TCTAAAGTCAATGCAATGCCCTCTTTTGACGTCAATGCAATGACTTGATT
CAATCTTTTATAAGCAACGATTTTAACTGCCAACTTTGCGCTAACTTTTT
GCCTATTCTAACAATTAGAATAGGCAAGGCAGAATAGAATAAGAAGGAGT
GCAAATCATAGAAAAAAAAAACAAATATTACATCATTTTATAATTTGAGA
CAAACTAAATCTATTTCAAAACAATCAAACGGGCAATACCTGCCTGTCTA
AAAGCAGTTTTTTAGAAGTTATCAGATATTAATCGTGATATGATAATATA
CGAGTTGCGAGTTACGAGTTACGAGTTACGAGTTGCATTTAGAACCACGA
GTTGCGAGTTACTTTTTACGAGTTACGAGTTACGAGNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGTAAAGAACTGTAGAGAAAAGTGCTCCCGAGCGGGGG
TAATAGGTTTGGATGCGTTGTTACTAAAAAAGGTAACATGAGGTAACACA
GGGTAATAGGGGGTAACAAGGTAACAGGCTGAGAATGATGGCTCTAAGGG
GTTGTTTCACCTTTCAGCTACAAACATCATATAACAATAACGAAAAAGAA
ATTAAAAAACGAAGGGGAAATAATTTATCATAATCAGAATGATTAAAATA
ACTTATATCTTCTGTGTAGAAAAAAACAAAAATTTATATAACGAGAGAAA
GAAAATGTTCGCCGCATGCCTCACTCGTTTTTAAAATGAAAGAAGAAGCC
TTGACGCCATACATAGAAAAGTTTTGGCGCGAAAAATTTAGTAAGACACA
AACTCATTTTTGTACGTTCATTATTTTTTTAAGAACAGTGAATAATGTAA
ATATGAATTTTGTCAAAAAGTGTCACTTTGTCTTGAAAATGACAGGTAAC
GTCCACGTTATTAAAAGTAGCATTAAAGATGTTTCTCGATAGGAAGAAAC
ACGCGCATTTCCTTTCAAAACTTAAAGTTATGAATGCTCTGTTTTGTTTT
TATACAAAAATGAGCGAAAAAATGTGTGATTTAAGTGGTTTCACAACTTT
AATCACAAAACGTAAACAGTTTGGCTGAGTTTTCCATGCTTTGCTTTGGG
TTTAGCTTTTTATGTGCTGTTATTATTTAAGATAACAATCTCAGACTTGA
TTTTAATTTGCAACTCGAACTTTTAATTTGCAGCTCGCACTTTTAATATG
CAACTCGCACTTAATATGGAACTCGCACCTTCAATTTGCAACTCGCACTT
TTAATTTGCAACTCGCGAATTTTGTGTGTTAAGATGCAACTCGTAACTCG
CAACTCGCGATTTTATTTTGTTAAAATGCAACTCGTAACTCGTAACTCGT
AAAAAGTAACTCGTAACTCGTGGTTCTAAATGCAACTCGTAACTCGTAAC
TTGTAACTCGTAACTCGCATATGAAAAATCCTCTATTAATCCTTCCCTGT
TTCTATCTGAGTTTTGAATAGAATTGTGAAATTTAATCTGTAAAATGTTC
GGGCGATTTAAATGTATATGTTTCGTAGTGCAAGTTCAAATCCGGGAAAA
AAGGTCCGACCTTTCTTCTTTATCGGGTGAATGCATAAATATATTCCTTT
CTGAACCGAGAGGTTCGCAACAGGCACGATGCACCGGGTACGGAAAATAG
GCGGCCGTGGTACCAAATTTAAAAAGCTTCCGGCCTGTGCTCTGTCAAGA
ACTTGGCTGCAACTTTTCCGTCTATAGACGTTTAAACTTTCTCCAAAAGA
CGTCTTCCAAATGTTTTAATGAGATTAGTTTTAACTTTGAGCTTCATNTG
AATTTTCTAACAACGATTTCCGTAGCTTTAGAAGAAAAAATTACATAACA
TAAAAGCCCAGTTTTTAAATTCCGCCCAGACAAGCCAAACTGCAAATTTG
AACTCAAATTTAATGTCTGAAATCGTTTCTGAACTCCTTTTCAAGAAAAA
GGCGACTTAAACTTTCTCCAAAAGACGTCTTTCAAATGTTTTAATGGAAT
AGTTTTAACTTTGAGCTTCATTCTCTGCAGTCGATTCTCTATCATTCGTA
CATCATAGTAGGGGGAATTTTGTTCGATTTTTTGGAATCGCTTGACTGTT
TTGTTAGTAGCACTTGTTATACATTTTTGGAAAGCTAAGGGGTAGGGGAA
TCGAAATTACTATGTTTCCAATTTTTTTTCGGACACTTTGGTGTGATTTT
CGGACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNAAAAAAAAATTGGAAACATAGTAATTTCGATTCCCCTACCCCTTAGC
TTTCCAAAAATGTATAACAAGTGCTTCTAACAAAACAGTCGAGCGATTTT
ACACAATGCCCTCTACCTCAGGTAAAATCTGTGAACAAGCCTCTACCGCT
TTACTGCATAACCACTTTTTTCCCTAGCAACTTTTATCAATTTATTCAAA
CCTTGACCTGACTGATTGATAAATGGCCAGCGATGGAGGTCACCAAAATA
ATTTTGTCACATTTAAAGTCACGTGGAAGTTCAGGCTAAAGCTTGTTATC
GCCGGATTTTAAAAAACACTCAAAAAATTTTTATCCAAACTTACGTAAGT
TTCATGGCCTGGGAAATTCTCTTTTCTCTTTGTTTACTATAAATCTTGCT
TCCTGATTGGTTCATTTCAAAAGTCATTTATGTGATACTACATTATAAGA
TTCACCAATATTCACAGCAGTATTGTTATCTTGAAACTTATCTTTATAAT
TTATCGATCACACCCATTGATTTCAAAGCCTCGAAGTGGCTAGCTCTAAA
ACTCTTCTAATTCGGTTTTAACTACGTTGACCCTGATTGCTCGAATCTCA
GTAATCCAAGGCCTAGTGTTCTGTGTCGAAATGTATTGAGAATTTTGGTT
ATTTCCTCGTTTAAAAAAATTTGAAGTTCGGGCGAGAAAGATGCTCTCTA
AGTCTAGCGTTAAAAATCAGAGTTAAAAATCTATCCTCCCCCTTCCAACC
TAAGTTAGAGCACTTCCAAATCGTAAGTGGCTATAAGATTTCACGAGGAT
TTCTCTTTTATCTCAAATGTAATGACCTTGATTGTTCTTTCATTGTTCTT
ATATTTTGAAGATTTTAAGTCTAATTCTCATAAAACTGTTCTTTAAAAAA
GTCTAAATCTTGGAAAAAGTTATCTAACATTTAACATTTAACCTACTCGA
CACTCCTTGGCAAACTATATGATGAAATCAAAATAAACGGTAGTTTGATA
CGTAAGTGTGCATGCGCTTGTGTCGCCATTATATATTTTTAGGTTAGGTA
ATTAAGCGAGAACAACTTTCGTATTCAAGCGCGATACGCGCATAATTATC
ATATTTTGACAATAAGTTGATAAGATACATTACATAATTTTGATCTTCCT
AAACAATATAACTACATAAACAAACCAGAGGAATATAAAAAGATGGAAAA
ACAGTTTCTTGAAAACAATGGAAACACGGTTAGCCATATACCAGGTCTCT
TGCCCTTAAGGGAGTTTATATCAAGTCAATATATATACGGTATACATTCA
AGTCAATATAGGTTTATTTTTTTATCGCTATACTAAAAGAATCTACATAA
TTAGCGTGTTGTGACAAAATTATTTTGTTTCAGGCCTGATTATGCGCAAA
CCTTAAGGGTTTATATTTTGGGTAAACCTCTCCTATACGAAAAGGTACTT
ATATTTTCTTGCTCAGAATTTCCAAGCGATTCTACTGATAGAACTGCATC
ATGACCGCACCATTAAATGGAAAGCTAGAGCTCGAGAAATCTTGATTTTA
CTCGATTTCTGACAGTTTTACAAGAACCAATTTAATATCATTGCGCGCGT
CATTGCGTTAAGAATTTCTTTTGCTATATATTGCTAAAAAATTGCTCCTT
ATTCTTAAAAATTGAACTAGTAATCAACGAAAAAAGAAAAACAAATTTTC
ATTTTTATCGTCAAATCATGTAGAAACCGTCCGATTTGTATGGCAAGCCG
TCTTTTCTGGACTTTCATTTAATGACCTAATCAACGTCTTTATAATTGAA
TATTCAATATAAGTGACCTTTGAACTTTGAGTAATCAGAAAAGTTGTTTT
CCCCTCTTTTAATATCCTCTGCATAAACATGCAAGCAAAAGAAATCAATT
ATAAACGCTTCGATTTTATTTCATAATTTATGCAACACTCAGTAATAATT
ATCGTCCAGGTATAATAATTAAGGAGACGAATCTTAGATAACATAATTTG
AACTGGGTGGCTGCAATCCACCGATTGAGGTTTTGAAAGTCACCCTGAAA
ACCTCTTTAAAATAAAAGGTGTCTTATAAGTTTATATCGGATAATTTGTG
TATACAACATAATAACACGGGGGTATATTTTCCCCGACGTTTTATACAGA
TTGTTTTGCAATTTGACTTTTGGCTTAATTTCGTTGAAGGGAGTTCACAA
TGGATGAATTGTGCGTTTTGTTGTTGCGTTGGTATAAATTGGCCCAAGTT
CGGAGGCTCGATGTCAACCCAACCACACCTGCGAAGAAAAGGCTTGAAAT
TCATCATACGCAACCATGGTCAAGAAGGAAGAAATCAATACCATCCAATA
CTACAGTTTGAAAGCTGTCGATGGTGAAAAAGTGAAGAAATTACTTCGAA
ACACAATCAATGCTCTTTCAGAGAAAGAATTTTCATCTGAAGATGGTTTG
ACCAGGTTTGTCACAGACGTTCTTGATACACGTTCACTCGCTGAATTATT
AATCTATGTTTCACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTT
TGACCTACGATTTGGACATCCTTGCTTTGATGAAGAAATTCAAATATTAC
AATAACCTCCCTCTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGA
GAAAAACAAAGCCTTCAATGACACTTTCGACAAGTCATTCTCCAAACTGG
TCAAAAGCTCCGATGAAAACCTCAAGTTGAAATTTAAGGATTTTTGCAAT
ACAGAGGCAACTAAAATGTCGACTGGCTTTCTGTACAAAGAAAATCAGAC
CAGCCTCGAGACCATTGACCCACACGCAGTCTACCCAACCAGTATTTACC
GACATTGCAATGGATTGACGTTGGCAGCAGCAGATTCGAAAACCATCGAA
GCGGTGATGAGCACTTCAATAACAACATCTATCAAAATCACTAATAAGGT
ATGCGAAGATCCTGTTTTGTCTTCTGCTCCAAGATATTCCTTTTTATATG
TTTATTCCATATAGTATACTTTTATTCTTGATCAAGGCCAAATGATTTGT
AAGTTACCAAGTGAAACGATCCAAATTGCAAATACTTCTTCAAGTATGTC
TTAAGACAAAACACTTTTAACGGTTTAATAAGTGGTAGAGTCTAACGGCT
GTGAACCCGTTTGTGAAATTTCTTTTACTGTACTTATTTCTTAGAAATGG
GGTATGTCTTGGACTATAGCATAGTCTAGTGCGTAAGGTGACCTTTTGCC
TCTTAACTCGCCAGTTAAATGAGTTTGGGAGTTTGTNGACCAGGTTTGTC
ACAGACGTTCTTGATACACGTTCACTCGCTGAATTATTAATCTATGTTTC
ACAGCTACCAGTTTTTAGTGAGGAATTCTCGCAATGTTTGACCTACGATT
TGGACATCCTTGCTTTGATGAAGAAATTCAAATATTACAATAACCTCCCT
CTGAGTCAAATCCTCTGCCTGGTGCAGCAACTGCTGGAGAAAAACAAAGC
CTTCAATGACACTTTCGACAAGTCATTCTCCAAACTGGTCAAAAGCTCCG
ATGAAAACCTCAAGTTGAAATTTAAGGATTTTTGCAATACAGAGGCAACT
AAAATGTCGACTGGCTTTCTGTACAAAGAAAATCAGACCAGCCTCGAGAC
CATTGACCCACACGCAGTCTACCCAACCAGTATTTACCGACATTGCAATG
GATTGACGTTGGCAGCAGCAGATTCGAAAACCATCGAAGCGGTGATGAGC
ACTTCAATAACAACATCTATCAAAATCACTAATAAGGTATGCGAAGATCC
TGTTTTGTCTTCTGCTCCAAGATATTCCTTTTTATATGTTTATTCCATTT
TATAGTATACTTCTATTCTTGATCAAGGCCAAATGATTTGTAAGTTACCA
AGTAAAACGATCCAAATTGCAAATACTTCTTCAAGTAGGTCTGATATCTA
AAGACAAAACACTTTTAACGGTTTAATAAGTGGTAGAGTCTAACGGCTGT
GAACCCGTTTGTGAAATTTCTTGTACTGTACTTATTTCTTAGAAATGGGG
TATGTCTTGGACTATAGCATAGTCTAGTGCGTAAGGTGACCTTTTGTCTC
TTAACTCGCCAGTTAAATGAGTTTGGGAGTTTGTTTGCTCCGTCTCTGGA
TTCTTCGGGAAGTGTCTTCTGTCTCCCGATCCCTAGCCTGGTTAACCAAG
CCGGTTTTTACAAGGCCAAGAAAGATACGGCTGAAGACCATATAGCATTA
TCGGTGCTTTAATGATTTTTATGATGTACGGAATTTTAATTTTGCCTTGA
AAAAACTGGCTTACGCGAAGCGCGCGTTCATATTTTGAACGCAGAAGTCG
GTGAGACTCGGCGAGCATTTGGCCTCTTCTAATTGGTCATAATACACCAT
GTGATAAGAAACGAAATTTTTCGTTTGTTTTGAAAACGCTTTTCACTTCT
CAACGAAAAACTTTTTAAACATATTTTATTCTGTACTTTTTGCATAAAAA
GAAAGATATGTTTTTCTCTCTCCCTCTTTTAATTTGCAAAACCTTTATAT
AACTGAATGAAAGAGAAGTTCATTAAATAGGGAGGAGGGTGTGTTTATTT
AACAAATTCCTTATTTTTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTTTTTTGCTTGGAAAAGCTTGAAGCACTCAATCTAGCCCTTCGGGA
TTTACAGAAATCTGTACCGTTACCGTAGCTGCGGCAGACCATGAAGGTCA
AGGTGTCTTAACAATGTGTTGACTGACTAATGTCGTTCTTTGGGAAGTTG
TAATATCGCCGCATTTTTCTTTAACAGAGATTGCACGGGTCAAAGTTACG
AAATATGAGCAATGAGGCATTTTACTCCAAAACAGATTTTGACACATCAT
GTCAAAAGCTAGTAATTTGACCTGATAATCGAATCAAAAATGAGAAATCA
AGTATTTGAAAACTCCCAAAATGGGAAATTAAACAAAGAGTGCCTCTGCT
GTATTTGAAAGATGACGTAAGATGAGAAAGAAAAGTACTATCCTACACAA
CAGGGAATATATAATAGTTCCTGTGTTGTTATAAAGAAACTCGTGTTAGG
TCAAATAGGACGACACTGCATTTACTAGTCGAAGATTCAGGCCCGAGAAT
ATCCAGGAATTAAGTTTTTTTGAACTGCCAATTTATTTTGTCACCCAGGT
AATAAAGGGTTTTAAGCATCACAGGGGCAGATTTGAATTGTCTTTAATAA
AAATTGCAGTTAAAGCCTTCGTAATTTCACAAGCACCATGCTTGTGTAAT
CAAAGTAATTGCCATTGAAGTTAAGCCTAATTTTGGCCCAAACGCTGGGA
AACCAGGTTAGAAGCTGGTAACATCGTGTATAAGCGGTTTGCATTTGAAT
TACCAATTGTTCATCTCTCAGGTGCTTCATCCTTCAAACAAGACATTGAT
CAACACTTACCTACACTTTGGGCGTTGCGTCGCCATCATTGACGATAAAG
TCATCCTGCACTATGGTGAAGAATTGCAAAAATATTTCGATCATTTCGGT
GTTGAGTTGGTGAATTTGATCCATGGTGGTAACGAGGTCGACAAAGATAT
CAAGAGCGTGGAGAAGATTTTAGTGCAGCTGAAACAAAATGGTGTGTCGA
GAAACGAACCTATCCTTATTGTTGGCGGGGGCGTTATCTCAGATATTGGT
GGTTTTGCAACCGCCCTTTATCATCGAAATACGCCCTACGTCATGTTGTG
TACATCCATTGTATCTGGTATTGACGCCGGACCTTCACCCCGAACATGTT
GTGATGGATTCGGGTTTAAGAATCTGTACGGTGCATATCACCCGCCCATC
TTGACGCTGACCGATCGTTCTTTCTTCAAAACACTTCATGAAGGCTGGAT
TCGACATGGTGAGTCATTGAAATACTTTTCATTATTCCTTATAGTTTTCT
TCTATATGCCGCATCTGTATTCGATATATTAACGAACTTTCCTACTTTCA
GCTACATAAAAACAACGAAAAGAGCATGATTTATTTTGAAATTAACTTAT
TGTTTAAAACAGCATTGACAAATTTAATATGCACTCCCTAAAGACCGTCA
TCAATCTTGAAAGTGCAGTCAGTCGTCACAAATAATGATTATTTCCAATG
ACGTTGAAGTGTCTTGGCAAAAATAGGCTGCTACCCCTCTTTCGGTCCCT
CTTAGAGAATGAAGTCCTCTGAAAATTGGACCTGTAAGACTCTTTTGTAT
TTTGAAATGAGCGTATTTTGAGAAAAAGTCAGAAAGGAGGAAAAAATCCC
TAACTATTTTCCATTTTTTCAGGAATCGCTGAGATTATCAAGATGGCTGT
TGTAAAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCGAT
TGATTCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCGAA
ACGTTGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGTTC
GGAATACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTACG
GCCATACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACGGA
CACGCTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTGGA
AAACTTCATCACGGCAGAGGAATGCAGCCGTATTTTACGTTTGATCAGTA
CAATGGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGGTT
GCTGCCGCAAACACCAAGGTCATNTCATTATTCCTTATAGTTTTCTTCTA
TATGCCGCATCTGTATTCGATATATTAACGAACTTTCCTACTTTCAGCTA
CATAAAAACAATGAAAAGAGCATGATTTATTTTGAAATTAACTTATTGTT
TAAAACAGCATTGACAAATTTAATATGCACTCCCTAAAGACCGTCATCAA
TCTTGAAAGTGCAGTCAGTCGTCACAAATAATGATTATTTCCAATGACGT
TGAAGTGTCTTGGCAAAAATAGGCTGCTACCCCTCTTTCGGTCCCTCTTA
GAGAATGAAGTCCTCTGAAAATTGGACCTGTAAGACTCTTTTGTATTTTG
AAATGAGCGTATTTTGAGAAAAAGTCAGAAAGGAGGAAAAAATCCCTAAC
TATTTTCCATTTTTTCAGGAATCGCTGAGATTATCAAGATGGCTGTTGTA
AAAGACAAAAGTTTATTCGAATTAATTGAGAAGGCCGGACCTCGATTGAT
TCGTACGAAATTCGGAACGGTTGGCAACACGGACGCCGAATTCGAAACGT
TGTGCGATCTTATCATTGGTAAAGCTATGGAAGGATACGTTCGTTCGGAA
TACGGAAACCTTTGGGAGACACATCAATGCCGACCTCACGCTTACGGCCA
TACGTGGTCGCCTGGTTACGAGCTTCCCGCTGGCATGCTTCACGGACACG
CTGTTGCCACATGTATGGGGTATGGAGCTTATTTGGCAAAGTTGGAAAAC
TTCATCACGGCAGAAGAATGCAGCCGTATTTTACGTTTGATCAGTACAAT
GGAGTTATCCCTTTGGCATGACATTATGGATAACCATGATTTGGTTGCTG
CCGCAAACACCAAGGTCATCGAGAAAAGAGGTAGGCTTTATGTTAGAAAG
AAAGTGTATTGTGTCTTTAAACATGGTGTGCGAGCGTTGCACATTTGCAA
AACAGACTATAAAACCACAGATATCTAAGCCCGAAGGGCTAGATAGGCAA
CTTTAAGCTTTCTCCAGCAAAAAAAAGTGAAGCAAAAATTTGACTTTTTA
AATTTCGTGCCGATGGATAGGATCTAGCATTTTAATTGTTTTCGGAGCGC
GAGATCAAAAACGTAGGCGAAAAACGCTATTTCACATCTCTCAAACCGGT
GAAATTGCATATTTTAGTCACGTGACTCTGGTAGGAAATCCTTCCAAAGA
TGAGCTTCACTTTTTGATAAAAGCCGCAAATCTAGCCCTTCGGGCTTTAC
AGATATCTGTGTATAAAACAACATAAGGTTTCGATGGCCAACATATTTAG
AACAAGTGAAGGACAATTTAAGCTTTAATGGACTCTAAAACACCCAATTT
TTTAGAAAATCTAACAAAAATAATCACAAAATGGATGAAATTAAGAACAA
TTTTTGCCTTACAGCATAAAAGGCTAAGAACATCCAAAAACAAACACTCA
GTTTAAGCCTGTGGTGGCTGTTTGCGACAGCTAAAGTGAGATTAATATTG
CAAACCACAATATAATGATAGTTATTTTGTTATCAAAGGTAATAAACAGA
GAAACAAACGCTAAGAGGGATAAAATTTCGAGCAATTGTTGTTGCTGAGA
AAATTGATTATATATTTCGCTCGCTCGATTGTTTTTCTAGAGCTCAAAAC
TAGAGTAACATTTTGATAGATTTTATTTATTTCGAAAGTTATGCAACTGT
ATTTTTTATCTCTCTCGTGGGTCTTGTCAATGCAATTATGTGATTACTTC
AAAAAGCATTTTACTAAGGAATGAGCTTCGTGAAAATTCTGATCGAGGTG
AGAGAGAGAATGTAGCATGTTTGAGACAAGGCATTCGTTGAGAGAATATT
TATCGAAATTTTTTTCTGTTTAATTCTAAAGATTCTTTTGCAACTTTCTC
CTGCTACAAAACAAATCTGGCTCTAAATATTTTCTGTTATACTGGTGGCG
AAGTCTAGATTACCATACATACCCCCTTCTCACAACGTTTTGAAGTGACA
CAATCATAAACTGATTATCTAAAAAATTGTTTCATCTCTAAAACATTCTT
TGAGAACGTTTATCCATCCTACGATACAGAAGTGGTTCGAAATTTATGAC
AATCGTCATCCTACTTTCCCAATTTCGAACAAAATATTTTTTTCACCACC
CCTGTATCAATCACTTAAACTTGTTTTGGGTTACAAAGGTGTAACTCGTT
AATTTACAGTCAAAAATATTGAATCCTTCTAATGATATTGTATCTTTCTC
ATCTCACAGGTGGCAATCTTTGTGCACCAGTACCCAAAGAACTTGGTCAA
TGTGGTTACATCAACGAGTTGTCACGTGATACCATTAACCAGACATTGGA
TGATTACAAAATGCTGTGTCAGCAATTTCCACGATCAGGACGAGGAGTTG
ATGTACACTGTCGCGATGTAGGGCTGGAAGATCCTTCTACTGTGGCAGGT
TATGGAGTAAATGATGTTTTGCAATCTAATGGTGCACCAAAGGTATGTTT
CTTTCTTTGATTTCAATGCTTTTAGAAACTGAAAAACTTCCAATTAAACG
CAACACTAATTTAATTCAATCGGTTCTTCATGATCGCGATTCTTAAGTTT
TGTTTACTTCTCAGTTCTATTTTCTATTAAATCCATGGTCAAACACTAGT
CTATGAACCACTGAAATTGTGTCAAGATCGGAATAAAAAAGTATAGCAAA
ATATAGAAATTTGGGCTATTTTGCAGTCCTCCTTTGGTGTTTACTGCTTC
TTCCAAAGAATGATGATGATGGTCATTTTATGAAAAAATAGTTAAATTTT
GTCGATTTAGCCTTTAAATATTCTGCATAAAAAGTATTTTTCTTGTTCTT
ATAGCATCCAAACGGAAGTGCAGAATCCAACCCTCCGTCATCTTACTCCG
AATGGATCAAAACGGTTCAAACAGAGCGGAACAGTGAATGGCAAATGAAC
GTCACTTTCCAAAAAGCCCTGGATACTGAATCCCCTCCTGATTTCAATCA
CTTCAAATTGTTTCATGATGGCGTCGAAACATACGCCATGGCTCAAACGA
CCATCCCTTCAAAAGGTGTCCAAAATATCGCCAATTTGACGCAAAACAAC
GAAATGTTTTCTCCCTGCATGGTTGGTTCGCTTGAGAGTCAATTCCTAAA
AATGCAATGCCAAATCAAAGGAGCTCGCAACGTGCTGGATGTCGGTACGT
TTACTGGAATGTCTGCTTTGGCGATGGCTGAAGGAATCCCCGATGATGGT
CAAGTTGTCACTTTAGAATGTGATGAAAAAATTGCTGACGTTGCACAACA
AGCTTTTTCAGCGTCGAAAGTCGGTCACAAGATCCGTCTCGAGTTAGGAA
ACGCCCTTCAAAGTATGAAGAAATTGGCAGCAAACGGCCAGAAATTCGAC
GTCATTTTTCTTGACGCCGATAAAGAGAATTACATCCTTTACTACGATCT
AGCCATGGATGAAGGAGTGTTAGCCGAAGGTGGAATTATCTTAGCTGATA
ATGTGTTGTGTTCTCTTTTGTACGACAAGAAAGATTTTCGAAGTCAGAAG
CTTCACGAGTTCAACCAACATGTGAAGAATGACGATCGGGTGGAGCAAGT
TGTTTTGACCGTACGGGAAGGGATCTCTATCATCAGAAGGCGTTAAATAA
ACCGCTCATTCATACAGACACATTCAGAGAAGAAATTTTAGATTTCAATT
ACATATTCCAAACAACATTATTATTTTCACGTTATTTTTTGTAAATAATT
TTTTTTGAAGGTTTCACCAAATTCTTGCATCAGCATTTTTATGTCACTTC
TTTTATCAAAGAACAGAAAAATTTTNTTCTTTTCTTGCATCAGCATTTTT
ATGTCACTTCTTTTATCAAAGAACAGAAAAATTTTGAATTCTAAATTTTG
TAAATGATTTTCCTTTATATCTGAAGTAATCATTGTCAAGCAGTTAATAG
GTTGTATTCTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045842XLOC_045842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073809-exon-scaffold_98-1575043694:26765..26816TCONS_00073809-exon-scaffold_98-1575043694:26765..26816Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1575043694:17719..18477TCONS_00073809-exon-scaffold_98-1575043694:17719..18477Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1575043694:12809..13295TCONS_00073809-exon-scaffold_98-1575043694:12809..13295Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1575043694:11087..11548TCONS_00073809-exon-scaffold_98-1575043694:11087..11548Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1575043694:9475..9707TCONS_00073809-exon-scaffold_98-1575043694:9475..9707Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1575043694:8005..9112TCONS_00073809-exon-scaffold_98-1575043694:8005..9112Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1510915933:26765..26816TCONS_00073809-exon-scaffold_98-1510915933:26765..26816Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1510915933:17719..18477TCONS_00073809-exon-scaffold_98-1510915933:17719..18477Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1510915933:12809..13295TCONS_00073809-exon-scaffold_98-1510915933:12809..13295Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1510915933:11087..11548TCONS_00073809-exon-scaffold_98-1510915933:11087..11548Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1510915933:9475..9707TCONS_00073809-exon-scaffold_98-1510915933:9475..9707Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1510915933:8005..9112TCONS_00073809-exon-scaffold_98-1510915933:8005..9112Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1491911889:26765..26816TCONS_00073809-exon-scaffold_98-1491911889:26765..26816Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1491911889:17719..18477TCONS_00073809-exon-scaffold_98-1491911889:17719..18477Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1491911889:12809..13295TCONS_00073809-exon-scaffold_98-1491911889:12809..13295Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1491911889:11087..11548TCONS_00073809-exon-scaffold_98-1491911889:11087..11548Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1491911889:9475..9707TCONS_00073809-exon-scaffold_98-1491911889:9475..9707Clytia hemisphaericaexon
TCONS_00073809-exon-scaffold_98-1491911889:8005..9112TCONS_00073809-exon-scaffold_98-1491911889:8005..9112Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:8005..26816 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.560858	1.28536	2.26204	1.82507	1.75208	2.12955	11.4016	10.92	9.39267	19.6733	12.7821	4.93579	0	0.227589	0	0	0	4.97975e-07	0	0.122377	0.5001	0.621615	67.2511	83.2767	0	0.0853441	74.7852	39.8623	492.524	291.909
Blast
[Close]
BLAST of TCONS_00073809 vs. Swiss-Prot (Human)
Match: CMTD1 (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.843e-18
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = 2 
Query: 2258 MVGSLESQFLKMQCQIKGARNVLDVGTFTGMSALAMAEGIPDDGQVVTLECDEKIADVAQQAFSASKVGHKIRLELGNALQSMKKLAANGQ--KFDVIFLDADKENYILYYDLAMDEGVLAEGGIILADNVLCS---LLYDKKDFRSQKLHEFNQHVKNDDRVEQVVLTVREG 2761
            M+   ++Q L    ++  A+  LD+GTFTG SALA+A  +P DG+VVT E D +  ++ +  +  ++  HKI L L  AL+++ +L A G+   FDV  +DADKEN   YY+  +   +L  GGI+    VL     L   K D  ++ +   N+ ++ D RV   +L + +G
Sbjct:   85 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQ--LLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDG 255
The following BLAST results are available for this feature:
BLAST of TCONS_00073809 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CMTD16.843e-1834.68Catechol O-methyltransferase domain-containing pro... [more]
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