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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073799 ID=TCONS_00073799|Name=TCONS_00073799|organism=Clytia hemisphaerica|type=transcript|length=700bp
CAAAAGGCAGCGAAGACaaaattccagatttttcgaagtcgaaagtgaaa
gtgctttGTCATCTTTTACAGTcaacataaaataaaattttttaatcgaC
ATCTCATTCAAAGATTTTTACACCAGAAGACAGACGAAATTTACCTTTAC
CATCTGACCATGGCAAACTCtaataattttgatttgatgGCTATTggcag
acattgtggtgtggaTTCCTGTAGAGTTTTGGATTATCTTCCCTTCAAAt
gtgatttttgcaaaaatgaatTTTGctTGTCACACAAGGACACTCATTCT
TGCTCTGAAAAGATTGATAAAGATGTAAGCATACTtcaactaaagtctgt
ctcagcCTCAAAACCTTTTACCGTCAACTGATCTAGCTAACTTGGCACAA
TtcgtcgaaacatgggactgtatGATATCTTgccctgtattttcacttac
tgttaaaactctttgacaacaaatttgttttgataactccaccaagttta
tcaatcatacttttcatgacgtcagcagtttatATAATTATTTATCTATT
ATTATTTAATCATTTTATCactaggaaattttttgaaatggcTGTATCTC
TTGATGAAGAAAAggcttttaaaaaattttaagtcTTATAGGCTGTAAAG
CGCGCCACAAATTAAATCTTTTGGAAACAGGGCGCCATTttgtaattatg Run BLAST on NCBI transcript from alignment at scaffold_98:219966..220872+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073799 ID=TCONS_00073799|Name=TCONS_00073799|organism=Clytia hemisphaerica|type=transcript|length=907bp|location=Sequence derived from alignment at scaffold_98:219966..220872+ (Clytia hemisphaerica)
CAAAAGGCAGCGAAGACaaaattccagatttttcgaagtcgaaagtgaaa
gtgctttGTCATCTTTTACAGTcaacataaaataaaattttttaatcgaC
ATCTCATTCAAAGATTTTTACACCAGAAGACAGACGAAATTTACCTTTAC
CATCTGACCATGGCAAACTCtaataattttgatttgatgGCTATTggcag
acattgtggtgtggaTTCCTGTAGAGTTTTGGATTATCTTCCCTTCAAAt
gtgatttttgcaaaaatgaatTTTGGTAAGAAAGAGTATAATTTTGAGCC
TTAGCTAGGTacttttttcatatatttttgacaggtttagttgacacttt
tgtagagttaatttttcaattcagtTATTGTTGTTTACTcagctattttt
tttcaaaaagagaaCAAATTACAAATGATGTTCCATCCTTTATCTGTCAC
TTCTAAcctcttcttctttctctttttttcagctTGTCACACAAGGACAC
TCATTCTTGCTCTGAAAAGATTGATAAAGATGTAAGCATACTtcaactaa
agtctgtctcagcCTCAAAACCTTTTACCGTCAACTGATCTAGCTAACTT
GGCACAATtcgtcgaaacatgggactgtatGATATCTTgccctgtatttt
cacttactgttaaaactctttgacaacaaatttgttttgataactccacc
aagtttatcaatcatacttttcatgacgtcagcagtttatATAATTATTT
ATCTATTATTATTTAATCATTTTATCactaggaaattttttgaaatggcT
GTATCTCTTGATGAAGAAAAggcttttaaaaaattttaagtcTTATAGGC
TGTAAAGCGCGCCACAAATTAAATCTTTTGGAAACAGGGCGCCATTttgt
aattatg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073799-exon-scaffold_98-1491911889:219966..220240 | TCONS_00073799-exon-scaffold_98-1491911889:219966..220240 | Clytia hemisphaerica | exon |
| TCONS_00073799-exon-scaffold_98-1510915933:219966..220240 | TCONS_00073799-exon-scaffold_98-1510915933:219966..220240 | Clytia hemisphaerica | exon |
| TCONS_00073799-exon-scaffold_98-1575043694:219966..220240 | TCONS_00073799-exon-scaffold_98-1575043694:219966..220240 | Clytia hemisphaerica | exon |
| TCONS_00073799-exon-scaffold_98-1491911889:220448..220872 | TCONS_00073799-exon-scaffold_98-1491911889:220448..220872 | Clytia hemisphaerica | exon |
| TCONS_00073799-exon-scaffold_98-1510915933:220448..220872 | TCONS_00073799-exon-scaffold_98-1510915933:220448..220872 | Clytia hemisphaerica | exon |
| TCONS_00073799-exon-scaffold_98-1575043694:220448..220872 | TCONS_00073799-exon-scaffold_98-1575043694:220448..220872 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_98 | supercontig | scaffold_98:219966..220872 + |
Blast
The following BLAST results are available for this feature:
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