|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073798 ID=TCONS_00073798|Name=TCONS_00073798|organism=Clytia hemisphaerica|type=transcript|length=1904bp AGTAGGGTATGCTTCCACATTTGGGATCGAACGGAAAATGAAACATTgca atcaaaaattgaaatggttCAGCAAACCATAACAGCAGTGTTACTAGATC ATCCTGTCCTGTAGCTGTACCTACAACCTTTCTACAATTTCTTAGATTTT TACACCAGAAGACAGACGAAATTTACCTTTACCATCTGACCATGGCAAAC TCtaataattttgatttgatgGCTATTggcagacattgtggtgtggaTTC CTGTAGAGTTTTGGATTATCTTCCCTTCAAAtgtgatttttgcaaaaatg aatTTTGctTGTCACACAAGGACACTCATTCTTGCTCTGAAAAGATTGAT AAAGATAGTACAATACCAGTTTGCCCACTTTGTCAGCAATACATTACCAa aggaatcaatggtgctgacGATAACACCCAGGTTGAACGACATATACAAA GTGGATGCAAGgataatgttttcaaaaaacgaAAGAAGAATAAGTGTTCT TCACCCAACTGTCGACAAATCAATTTGATCCCATTTAATTGTGAACGTTG CTATCAAAGCGTTTGTGTCAGGCACCGTCATCCAGGAGACCATCAATGCC TCCATGCAAACAGTAACCGAAATCCTTGGGTCAAAGTTtggtgaaaaaaa cttttctctctCGATTTGGTGTTATGATGTTGGTTCAAAACCGATGCTTG GTGATAGTGTCGTAGTGTGACAGTCCTCGAAAGTGTTTCACTTTCAACGA AAAGAGGAGGCTATGGAAACCTTGATTTCAAATGAAGAGAGACTCATTAC CAACACCTGCCTTTTCATTGCATGTCTTCTGCTTATTGCAAACTAAATTG TATGGGTGTCAAGAAATCACGTATAATATGCTGACCAGAATGCTGTTTTA AACAATCCTATAATGTAATCAATTATatattgttttttgaataaaatagg TCAATTTTTTACGGATTATGCTATAAATACTTCACTAAATATATTGTAAA TCTCgatttttattcaatatattTGCCTTGTGAAAGGTAACAAATTTTTT TCGCCTTTGGCTCAACCGTAACTATCTATCTTAGCAGAGACAACCTGATA ATTGGCCATTATTCAGAATGAGGGGTAAGGGGAGGGGCGTTCTATTGATC CCTAATCGAATGTTGATAAACAACGTGATCGTCTGTAAACTATTTgcaga aagaaaacaaaaataactttttccaaaacacgAAGGTATttataaattgt aaattttaaagtattttttgcTCGCTTTTGAGTAAATAGGGCAAAAGGAa caaatatattttatcaacaggAAGTTAACAAGTTTAAATCTTAAAAGtta gaagtatttctttttcattgtttttgtttcGTTTCCAACAGCATGCTAct agttatgacgtcacaaacaaACGAAACAAACGTTTTAAACGCAATGACgt caatgtttaaaattttatgttaCAGCAAACGagaaagctttttttttaag ttcGGTGTATTGCGTCGGTATATTAAAAACGAAATAAATTATTTATGATA AAATTAAGAGATTTGATAGCTATTTACATTGAGgtataaaaagttgaata tagAGGTCAAGCTAGCAGGAATGCAATAATCATATGTACAAAAAGAATGC TCGTTGCAGGTGAAATTCTCAACGATGCACtctcaaataaattaaaatcc ATTCTCGTCACTTCTCCTTCTGTAACAGTGATATTTTTCCATTGAGTAAA ATAACCGTCAGCCGAAACTTCGAGCTGATAGTTTCCAGGCAACAATAATC GCCAATATTCCCCAGTTCTccatgttttgatttcttttgttcgATCGTGG ATTAGAATCTTTGCACCTTCGATTGGTTCATGGTCATGTGTCAGAACAAC Ccct Run BLAST on NCBI protein sequence of AN1 type zinc finger protein >TCONS_00073798-protein ID=TCONS_00073798-protein|Name=AN1 type zinc finger protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
MANSNNFDLMAIGRHCGVDSCRVLDYLPFKCDFCKNEFCLSHKDTHSCSE KIDKDSTIPVCPLCQQYITKGINGADDNTQVERHIQSGCKDNVFKKRKKN KCSSPNCRQINLIPFNCERCYQSVCVRHRHPGDHQCLHANSNRNPWVKVW Run BLAST on NCBI transcript from alignment at scaffold_98:217476..223794+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073798 ID=TCONS_00073798|Name=TCONS_00073798|organism=Clytia hemisphaerica|type=transcript|length=6319bp|location=Sequence derived from alignment at scaffold_98:217476..223794+ (Clytia hemisphaerica) AGTAGGGTATGCTTCCACATTTGGGATCGAACGGAAAATGAAACATTgca
atcaaaaattgaaatggttCAGCAAACCATAACAGCAGTGTTACTAGATC
ATCCTGTCCTGTAGCTGTACCTACAACCTTTCTACAATTTCTTAGGTAAA
TGGCTGATCATGGTTGAAAATGACGACGTCGCACAATAGACCTTTTCGCC
TTTCCACCCGCCATCTTGAATTGTATgcaaaaatagaggaacgaaaaagc
cgtggttggatttagttggaaaatatgcaaaacatatgcaagtttacaca
aagattaaaaagacaacaaaccatcttataaagaaatatcataatcatta
gaacaataaaagatggaatttcttaatccaaaaagaaatatttacagaac
aacaaaagccttttagaaatttgttcttaaagacattgcatattctgttt
tcctgccattaaaaaatttgaccaagacggagtacacacatcaaactttc
aaaacacgcaaactgaaagcagtgattatgacgtcacacattcagagggt
tcagatcaatgttttgatttgattgtctgacggttctattcccaggagaa
taatttagcGTCAGTCGAATAAGGATAATTttgtaccttcgcgggtgatt
tttcagcttgagtttatgtctaatgttatggttttttgaagtgcttgttc
taagagatgagcgaatttgattatttgtagttttcaaaagaagcaaattt
aatctttcttctacaagattacactttaatataatgccaattatgcatgt
accGTGAGTgctcctaaatccgacagccctgcctaaatccgatggggtct
ttcaaagatacaacctgaaataaaaacaaacctttcgctgtgacgcaaca
aagataccaaagtgtcaactaaactgagagatttgatacactgaaccaat
tgaaccaaaacattagttgcttcttatacaaaacataatttttcattaca
aaattgttaacgttttaaacacaagcaacggattcagaataatagaggta
attacttttacaactcacacttttttatcacattcattgaccactcacgg
taagttttatattaatactttctttttgcatatgttttgcatactttcta
agggaatttcaccacggcaattcggccaccataattgggctcttccagaa
aaaatttgatatagGGGGTGGATGACgggaattttcagataaaaaaagca
ctcggaaatccagtcaatttttcaaagtgcttcGGAAATTctgctcaatt
ttttatttcaacccttggaaattccacgtaatttgtcaaagttttgaaaa
aggtatcagaaattccagatttttccaccaaaaaattgattttgtatcgg
aaatccaggagtttcaattgcttttgtattggaaatccaggaatttcaaa
aaaacattttgcctcGGAATTCCGCTGTCGTCCACCCCCCTATAACGGAC
TTtaactggaagagcccatttttgcatacaatagaccttttttcaaagag
gccaccctgttgaataattatgtagtccagcagaaaaacaatgataaaac
catgcataattattacaatatgcaNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNatgcatgatacagtaattatgcatggctctatcattgtttt
tatggctggactacataattattcaacaggacgtcctctttgaaaaaagg
tctattcaatatggcggatggaaaggcgaaaagaaGGTCTGTTTACCAGG
TTTTAACTATCCAACCTAACATTGTACCCAGAGCAGTCTATTACGCAAAA
ACTACTGCTAAAGGCGCCGTGATATAGTGATCATTGACCTTGGCTTGGAC
TtagttgctgcacaggcgactgctGAGGACGCGAGGTTCGATTCCCCCAc
ttgcagcggttcacttggtaAGTGAATGAAGCTTTGCCTGGTTGAACCCA
TGCCATGTCAGGGGAATTGGgaagtcagttcaaggtgctgacggggcact
aattgaaagcgtctatagttgcgaaaatgggcctGAAAGAGAAGCTTCCT
GTAACTCAAACTCAACCAAatacaaataatagaaatagtTAAATAGAAAA
GGCTACTTGGAATGGAATGGAGTATTGACTACATAAATGTAGGCATTGTG
AGAGATTGCTGTCCTGGTAAATATTTGGAAATACCCAGCATTTAATGGAA
AGATCTGGAAAGATCTTTTCCTTCGGTCACGTTCTCGCCGGAGAAGCTTG
TACCTCGCAGCTTTgctctaccattttgaaaaagttgttttcGTGTGTCT
CGCTTGCTCAATCATTTCTCCAATAGTTTCCTTGGTCTTGCAAAAGGCAG
CGAAGACaaaattccagatttttcgaagtcgaaagtgaaagtgctttGTC
ATCTTTTACAGTcaacataaaataaaattttttaatcgaCATCTCATTCA
AAGATTTTTACACCAGAAGACAGACGAAATTTACCTTTACCATCTGACCA
TGGCAAACTCtaataattttgatttgatgGCTATTggcagacattgtggt
gtggaTTCCTGTAGAGTTTTGGATTATCTTCCCTTCAAAtgtgatttttg
caaaaatgaatTTTGGTAAGAAAGAGTATAATTTTGAGCCTTAGCTAGGT
acttttttcatatatttttgacaggtttagttgacacttttgtagagtta
atttttcaattcagtTATTGTTGTTTACTcagctattttttttcaaaaag
agaaCAAATTACAAATGATGTTCCATCCTTTATCTGTCACTTCTAAcctc
ttcttctttctctttttttcagctTGTCACACAAGGACACTCATTCTTGC
TCTGAAAAGATTGATAAAGATGTAAGCATACTtcaactaaagtctgtctc
agcCTCAAAACCTTTTACCGTCAACTGATCTAGCTAACTTGGCACAATtc
gtcgaaacatgggactgtatGATATCTTgccctgtattttcacttactgt
taaaactctttgacaacaaatttgttttgataactccaccaagtttatca
atcatacttttcatgacgtcagcagtttatATAATTATTTATCTATTATT
ATTTAATCATTTTATCactaggaaattttttgaaatggcTGTATCTCTTG
ATGAAGAAAAggcttttaaaaaattttaagtcTTATAGGCTGTAAAGCGC
GCCACAAATTAAATCTTTTGGAAACAGGGCGCCATTttgtaattatgacg
tcatcatgtTCCTTTACGTCAtgtaaattttggttgaaaagatattcaac
tttATAGATTTCCAAAAATCTAACTGCTTCCTCTATATAATTTGGGGTCA
CTTTTTAAAAGTGCCGACATCATCAAATTTAGGAGGactaaaaaaatttt
aagttgaataaaagttagaaaaacttgtaaaatttcaaggcaGTAGCTCT
AAGTAGGGCTTTTGTCCCCCGTGCTAAATAGGGTTATAAACATATAGTGC
AGAAAGGGGTCTGAtacccccttcttaaatgatcccccttcttggcatta
ccccaacctttaaaaataccTATCCCCTAAGGatttcagacaaaaaatta
gctaacaaatatatgtgaaatatcttaAGAGAGAGAAAGcaaaataataa
acttctttcttcttattGACTCaaacagaaaactttttttcatgaagacc
aaatttcataacagtgcttgaaaataatctacaatatatataATTAAGTT
CCCCACTTCTCAAACTACCCCCTTCTTAAACTACCCCTTTCCCCTTCCTT
GATATCCttcctttttcatgaaaatttctgacccccccccctttatcaTT
CTTTGGAAGGTGTCAAGGGGGGAACAAACTACAAACTCTGTCTTGGTATT
TAACACCCTTGCAATTAGGAAGACCACTGAGTctcatttagttttttttt
caagtggaGTTTGTTGGAATGCAGACTAGCAAATTTGTGTAATCTTTGCC
TTTATAGGTCAACACAAATTTACTGACTCGAcatttaaactttgaaaaaa
taaccattttccACAATATTTGCTGCTTTTTATCTTAATTACCCTACTGA
TAGAGCTACTTCTTTGTcaacaaatttcttttgtttaatcaAGGAAATCA
AAAGGGCAAATAATAATTGCATAATAAATGCATTAATTCAGTGTTTCCAT
ATTATTATAAAGCTTCGTTTATTTCATTCAGAGTACAATACCAGTTTGCC
CACTTTGTCAGCAATACATTACCAaaggaatcaatggtgctgacGATAAC
ACCCAGGTATTTTGAGGTTTCCTATTTTAAGACATAACAAAcactttaaa
aatatatattaaaagAAGACATTTTTAATTACAACGAAAAGTTGTCAATA
TCTTGTAAGCTATgaggataaaattttgaataaagaaaatCCTAGCTCTT
TGATGCTTTAACTttaattccattcctatcattCCCTTCAGGTTGAACGA
CATATACAAAGTGGATGCAAGgataatgttttcaaaaaacgaAAGAAGAA
TAAGTGTTCTTCACCCAACTGTCGACAAATCAATTTGATCCCATTTAATT
GTGAACGTTGCTATCAAAGCGTTTGTGTCAGGTACGAGTTGATTTTCTAA
AAGGACAATAGATTGATAATAGATAAAAGGTATTCCATGGCAATATAAAA
AGTTATAGATAGATGTTTGAAGACCGTTTTAAAACTAATTAACAGgaata
tttcttttataaatgTTGTATTTTGTGTGAATATTCTGCATTAGTTCAAT
ATGAATTTcatgtttgttattgtttcttGATTCTAGGCACCGTCATCCAG
GAGACCATCAATGCCTCCATGCAAACAGTAACCGAAATCCTTGGGTCAAA
GTTtggtgaaaaaaacttttctctctCGATTTGGTGTTATGATGTTGGTT
CAAAACCGATGCTTGGTGATAGTGTCGTAGTGTGACAGTCCTCGAAAGTG
TTTCACTTTCAACGAAAAGAGGAGGCTATGGAAACCTTGATTTCAAATGA
AGAGAGACTCATTACCAACACCTGCCTTTTCATTGCATGTCTTCTGCTTA
TTGCAAACTAAATTGTATGGGTGTCAAGAAATCACGTATAATATGCTGAC
CAGAATGCTGTTTTAAACAATCCTATAATGTAATCAATTATatattgttt
tttgaataaaataggTCAATTTTTTACGGATTATGCTATAAATACTTCAC
TAAATATATTGTAAATCTCgatttttattcaatatattTGCCTTGTGAAA
GGTAACAAATTTTTTTCGCCTTTGGCTCAACCGTAACTATCTATCTTAGC
AGAGACAACCTGATAATTGGCCATTATTCAGAATGAGGGGTAAGGGGAGG
GGCGTTCTATTGATCCCTAATCGAATGTTGATAAACAACGTGATCGTCTG
TAAACTATTTgcagaaagaaaacaaaaataactttttccaaaacacgAAG
GTATttataaattgtaaattttaaagtattttttgcTCGCTTTTGAGTAA
ATAGGGCAAAAGGAacaaatatattttatcaacaggAAGTTAACAAGTTT
AAATCTTAAAAGttagaagtatttctttttcattgtttttgtttcGTTTC
CAACAGCATGCTActagttatgacgtcacaaacaaACGAAACAAACGTTT
TAAACGCAATGACgtcaatgtttaaaattttatgttaCAGCAAACGagaa
agctttttttttaagttcGGTGTATTGCGTCGGTATATTAAAAACGAAAT
AAATTATTTATGATAAAATTAAGAGATTTGATAGCTATTTACATTGAGgt
ataaaaagttgaatatagAGGTCAAGCTAGCAGGAATGCAATAATCATAT
GTACAAAAAGAATGCTCGTTGCAGGTGAAATTCTCAACGATGCACtctca
aataaattaaaatccATTCTCGTCACTTCTCCTTCTGTAACAGTGATATT
TTTCCATTGAGTAAAATAACCGTCAGCCGAAACTTCGAGCTGATAGTTTC
CAGGCAACAATAATCGCCAATATTCCCCAGTTCTccatgttttgatttct
tttgttcgATCGTGGATTAGAATCTTTGCACCTTCGATTGGTTCATGGTC
ATGTGTCAGAACAACCcct Coding sequence (CDS) from alignment at scaffold_98:217476..223794+ >TCONS_00073798 ID=TCONS_00073798|Name=TCONS_00073798|organism=Clytia hemisphaerica|type=CDS|length=2265bp|location=Sequence derived from alignment at scaffold_98:217476..223794+ (Clytia hemisphaerica) ATGGCAAACTCtaataattttgatttgatgGCTATTggcagacattgtgg tgtggaTTCCTGTAGAGTTTTGGATTATCTTCCCTTCAAAtgtgattttt gcaaaaatgaatTTTGctTGTCACACAAGGACACTCATTCTTGCTCTGAA AAGATTGATAAAGATAGTACAATACCAGTTTGCCCACTTTGTCAGCAATA CATTACCAaaggaatcaatggtgctgacGATAACACCCAGGTTGAACGAC ATATACAAAGTGGATGCAAGgataatgttttcaaaaaacgaAAGAAGAAT AAGTGTTCTTCACCCAACTGTCGACAAATCAATTTGATCCCATTTAATTG TGAACGTTGCTATCAAAGCGTTTGTGTCAGGCACCGTCATCCAGGAGACC ATCAATGCCTCCATGCAAACAGTAACCGAAATCCTTGGGTCAAAGTTtgg tgaATGGCAAACTCtaataattttgatttgatgGCTATTggcagacattg tggtgtggaTTCCTGTAGAGTTTTGGATTATCTTCCCTTCAAAtgtgatt tttgcaaaaatgaatTTTGctTGTCACACAAGGACACTCATTCTTGCTCT GAAAAGATTGATAAAGATAGTACAATACCAGTTTGCCCACTTTGTCAGCA ATACATTACCAaaggaatcaatggtgctgacGATAACACCCAGGTTGAAC GACATATACAAAGTGGATGCAAGgataatgttttcaaaaaacgaAAGAAG AATAAGTGTTCTTCACCCAACTGTCGACAAATCAATTTGATCCCATTTAA TTGTGAACGTTGCTATCAAAGCGTTTGTGTCAGGCACCGTCATCCAGGAG ACCATCAATGCCTCCATGCAAACAGTAACCGAAATCCTTGGGTCAAAGTT tggtgaATGGCAAACTCtaataattttgatttgatgGCTATTggcagaca ttgtggtgtggaTTCCTGTAGAGTTTTGGATTATCTTCCCTTCAAAtgtg atttttgcaaaaatgaatTTTGctTGTCACACAAGGACACTCATTCTTGC TCTGAAAAGATTGATAAAGATAGTACAATACCAGTTTGCCCACTTTGTCA GCAATACATTACCAaaggaatcaatggtgctgacGATAACACCCAGGTTG AACGACATATACAAAGTGGATGCAAGgataatgttttcaaaaaacgaAAG AAGAATAAGTGTTCTTCACCCAACTGTCGACAAATCAATTTGATCCCATT TAATTGTGAACGTTGCTATCAAAGCGTTTGTGTCAGGCACCGTCATCCAG GAGACCATCAATGCCTCCATGCAAACAGTAACCGAAATCCTTGGGTCAAA GTTtggtgaATGGCAAACTCtaataattttgatttgatgGCTATTggcag acattgtggtgtggaTTCCTGTAGAGTTTTGGATTATCTTCCCTTCAAAt gtgatttttgcaaaaatgaatTTTGctTGTCACACAAGGACACTCATTCT TGCTCTGAAAAGATTGATAAAGATAGTACAATACCAGTTTGCCCACTTTG TCAGCAATACATTACCAaaggaatcaatggtgctgacGATAACACCCAGG TTGAACGACATATACAAAGTGGATGCAAGgataatgttttcaaaaaacga AAGAAGAATAAGTGTTCTTCACCCAACTGTCGACAAATCAATTTGATCCC ATTTAATTGTGAACGTTGCTATCAAAGCGTTTGTGTCAGGCACCGTCATC CAGGAGACCATCAATGCCTCCATGCAAACAGTAACCGAAATCCTTGGGTC AAAGTTtggtgaATGGCAAACTCtaataattttgatttgatgGCTATTgg cagacattgtggtgtggaTTCCTGTAGAGTTTTGGATTATCTTCCCTTCA AAtgtgatttttgcaaaaatgaatTTTGctTGTCACACAAGGACACTCAT TCTTGCTCTGAAAAGATTGATAAAGATAGTACAATACCAGTTTGCCCACT TTGTCAGCAATACATTACCAaaggaatcaatggtgctgacGATAACACCC AGGTTGAACGACATATACAAAGTGGATGCAAGgataatgttttcaaaaaa cgaAAGAAGAATAAGTGTTCTTCACCCAACTGTCGACAAATCAATTTGAT CCCATTTAATTGTGAACGTTGCTATCAAAGCGTTTGTGTCAGGCACCGTC ATCCAGGAGACCATCAATGCCTCCATGCAAACAGTAACCGAAATCCTTGG GTCAAAGTTtggtga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00073798-exon-scaffold_98-1491911889:217476..217620 | TCONS_00073798-exon-scaffold_98-1491911889:217476..217620 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1510915933:217476..217620 | TCONS_00073798-exon-scaffold_98-1510915933:217476..217620 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1575043694:217476..217620 | TCONS_00073798-exon-scaffold_98-1575043694:217476..217620 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1491911889:220079..220240 | TCONS_00073798-exon-scaffold_98-1491911889:220079..220240 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1510915933:220079..220240 | TCONS_00073798-exon-scaffold_98-1510915933:220079..220240 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1575043694:220079..220240 | TCONS_00073798-exon-scaffold_98-1575043694:220079..220240 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1491911889:220448..220496 | TCONS_00073798-exon-scaffold_98-1491911889:220448..220496 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1510915933:220448..220496 | TCONS_00073798-exon-scaffold_98-1510915933:220448..220496 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1575043694:220448..220496 | TCONS_00073798-exon-scaffold_98-1575043694:220448..220496 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1491911889:221857..221931 | TCONS_00073798-exon-scaffold_98-1491911889:221857..221931 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1510915933:221857..221931 | TCONS_00073798-exon-scaffold_98-1510915933:221857..221931 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1575043694:221857..221931 | TCONS_00073798-exon-scaffold_98-1575043694:221857..221931 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1491911889:222117..222256 | TCONS_00073798-exon-scaffold_98-1491911889:222117..222256 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1510915933:222117..222256 | TCONS_00073798-exon-scaffold_98-1510915933:222117..222256 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1575043694:222117..222256 | TCONS_00073798-exon-scaffold_98-1575043694:222117..222256 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1491911889:222462..223794 | TCONS_00073798-exon-scaffold_98-1491911889:222462..223794 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1510915933:222462..223794 | TCONS_00073798-exon-scaffold_98-1510915933:222462..223794 | Clytia hemisphaerica | exon |
TCONS_00073798-exon-scaffold_98-1575043694:222462..223794 | TCONS_00073798-exon-scaffold_98-1575043694:222462..223794 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_98 | supercontig | scaffold_98:217476..223794 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR000058 | Znf_AN1 |
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0008270 |
zinc ion binding |
Blast
BLAST of TCONS_00073798 vs. Swiss-Prot (Human)
Match: ZFN2B (AN1-type zinc finger protein 2B OS=Homo sapiens GN=ZFAND2B PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.277e-18 Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 3
Query: 225 IGRHCGVDSCRVLDYLPFKCDFCKNEFCLSHKD--THSCSEKIDKDSTIPVCPLCQQYITKGINGADDNTQVERHIQSGCXXXXXXXXX---XXXCSSPNCRQINLIPFNCERCYQSVCVRHRHPGDHQC 599
+G HC SC+ LD+LP KCD C FC H H C KD +PVCPLC + G + V HI C+ + ++++ NKC CRQ ++ CERC ++ C++HRHP DH C
Sbjct: 6 LGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNVPVPVA-RGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDC 134
The following BLAST results are available for this feature:
|