TCONS_00073769 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073769
Unique NameTCONS_00073769
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length322

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073769 ID=TCONS_00073769|Name=TCONS_00073769|organism=Clytia hemisphaerica|type=transcript|length=322bp
CTAAATAaaagtttgaataaaaaatgtcAAGAAAGCTAATAATGAAAACA
ATTATATTATGCATGTACAATAAAGTATacaaatgaattttttgaaaaga
tttactACTGCAATAAAAATCATTCCttataatacaaaaaaaaagaagtc
tgtCAAACtacaataaaatttctccaaaattaggaaaaaacCCAAAATTG
AAACTTAAAAACTAATGAGTACCAGACCATAAaaactctgaaaaaaaaat
tcatcattaaAAGTCCTTAAAAACCCAAAACCTCATTAATTAGTAACTAC
ACATCCATTAATAAATTacaaa
Run BLAST on NCBI

transcript from alignment at scaffold_97:719396..719717

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073769 ID=TCONS_00073769|Name=TCONS_00073769|organism=Clytia hemisphaerica|type=transcript|length=322bp|location=Sequence derived from alignment at scaffold_97:719396..719717 (Clytia hemisphaerica)
tttgtAATTTATTAATGGATGTGTAGTTACTAATTAATGAGGTTTTGGGT
TTTTAAGGACTTttaatgatgaatttttttttcagagtttTTATGGTCTG
GTACTCATTAGTTTTTAAGTTTCAATTTTGGgttttttcctaattttgga
gaaattttattgtaGTTTGacagacttctttttttttgtattataaGGAA
TGATTTTTATTGCAGTagtaaatcttttcaaaaaattcatttgtATACTT
TATTGTACATGCATAATATAATTGTTTTCATTATTAGCTTTCTTgacatt
ttttattcaaactttTATTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045815XLOC_045815Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073769-exon-scaffold_97-1491911889:719396..719717TCONS_00073769-exon-scaffold_97-1491911889:719396..719717Clytia hemisphaericaexon
TCONS_00073769-exon-scaffold_97-1510915933:719396..719717TCONS_00073769-exon-scaffold_97-1510915933:719396..719717Clytia hemisphaericaexon
TCONS_00073769-exon-scaffold_97-1575043694:719396..719717TCONS_00073769-exon-scaffold_97-1575043694:719396..719717Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:719396..719717 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.59259	5.81655	10.6635	17.0399	0.846712	2.34179	2.01805	2.26713	0.529091	0.655364	0.954168	1.25447	0.208787	0	0.713046	0.765208	0.707005	1.69087	1.33487	0.698423	1.82117	3.10906	1.79975	1.63623	0	0	2.58279	1.83761	2.78753	3.19506
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073769 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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