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TCONS_00073763 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073763
Unique NameTCONS_00073763
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length239

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073763 ID=TCONS_00073763|Name=TCONS_00073763|organism=Clytia hemisphaerica|type=transcript|length=239bp
gttttttctttacattttaGCCAAGAAAAGGACAAAGAAGGTCTAATTGA
CcaatctttttgcttttttctaaaaGTTGGACGTATCAGCAGTCTTAAAA
GTCACTTTGATCACAAACGGCGAGCACTAACGGCGAGCcttgtcaaattt
tctttaaatcttaGGCGCAAAATAACTCCTTGTGGTGGGCGGGGAAATTC
CCCAATGACCAAATAATTTCCCCAGAAGTGAAGTTCAAC
Run BLAST on NCBI

transcript from alignment at scaffold_97:513599..513837

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073763 ID=TCONS_00073763|Name=TCONS_00073763|organism=Clytia hemisphaerica|type=transcript|length=239bp|location=Sequence derived from alignment at scaffold_97:513599..513837 (Clytia hemisphaerica)
GTTGAACTTCACTTCTGGGGAAATTATTTGGTCATTGGGGAATTTCCCCG CCCACCACAAGGAGTTATTTTGCGCCtaagatttaaagaaaatttgacaa gGCTCGCCGTTAGTGCTCGCCGTTTGTGATCAAAGTGACTTTTAAGACTG CTGATACGTCCAACttttagaaaaaagcaaaaagattgGTCAATTAGACC TTCTTTGTCCTTTTCTTGGCtaaaatgtaaagaaaaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045809XLOC_045809Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073763-exon-scaffold_97-1491911889:513599..513837TCONS_00073763-exon-scaffold_97-1491911889:513599..513837Clytia hemisphaericaexon
TCONS_00073763-exon-scaffold_97-1510915933:513599..513837TCONS_00073763-exon-scaffold_97-1510915933:513599..513837Clytia hemisphaericaexon
TCONS_00073763-exon-scaffold_97-1575043694:513599..513837TCONS_00073763-exon-scaffold_97-1575043694:513599..513837Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:513599..513837 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.832131 1.03492 0 4.93053 0.974042 0 5.50076 1.54049 0 0.926043 1.21749 0 0 1.03804 0.57013 4.95195 1.40659 19.4959 12.5995 0.949474 0 0 0 2.94409 2.62753 6.26664 0.301124 7.42001 7.35238
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073763 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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