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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073761 ID=TCONS_00073761|Name=TCONS_00073761|organism=Clytia hemisphaerica|type=transcript|length=1244bp
TGAAGGGGTGCaaaattgactaaaaaaataagaacttcTAAATAGAAAAT
ATAGAGAAATAAAACAATACAATAAACTGCCTATAAGACGCTCCATAAGA
ATTTTGCGTGTGATGACGTAATTAGGGCTCCTGAAGATTTTGGCAGCATG
GAACCAGTGGCAAACGCCCGGGCTAATTTGGGTACTTTCGTACACATTGT
ATAATAAGTATCAAAAATTAagcattgtttttatttaaaataccaaaaat
aatGACTGATTTATTATCTCCCCAATAATAGTCTGGTGTTTGTTCATCCA
CTTTCCATCTCTCATCTTCACCACTATCATCTCTTGAATAACGATCAAAT
TCCAAGCATTTCTCAAAACTCGTTGGGTGGAGTAAAAGAAAAACGCCTTT
TTCCCATTGCTGGATTCCAATCCCTTCAACAATAAGAGTTGACATTCCCT
CAGGATAGTGTGAGTTTTTgcgttttgaaacaaaataaatggACTTCCAA
AAACCTTTGGAATACTCTTCAGTAAAATGGCGTTCCATGTCTTTGCGGAT
GAATACGAAATCTTTCGATTGGTATTGTACTTTGTTGCGCATAATTTTCG
TTATATTTGAATACCAGTGCTGATAGGAACCGTATAAATCAAACTCCATT
TCCTCGCCTTTAAAGAATTTCTTAGCACCCCAAATCAGTTTATCAGTTTT
CGACAAGAAAGATGGCAAGCTAGTATTCTTGTTATTGCAACTGTCGCTTT
CTTGTTTCAACGTGTCAAGTTCATTTTCCAGCAATTCGATTCTTTGGCGT
TGTTCAGAAATTGTGTCCTTAAGTATATGGATATTGGTGGcattttcaat
attcaatattttcttcTCTGGACATCCATTacatttcaatttcttcttta
ttGAGTTAAGGTCGATTTCCAGCGTCTCtattctgccattttgagacATT
ACCTGACGTTGAATGTTAATTTTAAAGTCGTCAAAAGATTTTTGATCCGT
GGTGCAATTTTTATTTGGAATCTCAACGCTGCTCATTACAGCAGTATCAT
TCTTGTTGCTTTCATCTTTGACAGCATAACATTGCACGCAATAAACGCTC
AGAGAGAATACCAGTAAAATACAACTTGAGAATAAATTCATCTCGAGCAA
GGAGCTTTATATTCAAGTCAAAACTTCCCAGATGATAATACTTAATGTTT
TGTTCAAACTTTTGATCCAAGATGAATGAATGATAACTACGAAC Run BLAST on NCBI protein sequence of TCONS_00073761-protein >TCONS_00073761-protein ID=TCONS_00073761-protein|Name=TCONS_00073761-protein|organism=Clytia hemisphaerica|type=polypeptide|length=307bp
MNLFSSCILLVFSLSVYCVQCYAVKDESNKNDTAVMSSVEIPNKNCTTDQ
KSFDDFKINIQRQVMSQNGRIETLEIDLNSIKKKLKCNGCPEKKILNIEN
ATNIHILKDTISEQRQRIELLENELDTLKQESDSCNNKNTSLPSFLSKTD
KLIWGAKKFFKGEEMEFDLYGSYQHWYSNITKIMRNKVQYQSKDFVFIRK
DMERHFTEEYSKGFWKSIYFVSKRKNSHYPEGMSTLIVEGIGIQQWEKGV
FLLLHPTSFEKCLEFDRYSRDDSGEDERWKVDEQTPDYYWGDNKSVIIFG
ILNKNNA Run BLAST on NCBI transcript from alignment at scaffold_97:500163..501406 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073761 ID=TCONS_00073761|Name=TCONS_00073761|organism=Clytia hemisphaerica|type=transcript|length=1244bp|location=Sequence derived from alignment at scaffold_97:500163..501406 (Clytia hemisphaerica)
GTTCGTAGTTATCATTCATTCATCTTGGATCAAAAGTTTGAACAAAACAT
TAAGTATTATCATCTGGGAAGTTTTGACTTGAATATAAAGCTCCTTGCTC
GAGATGAATTTATTCTCAAGTTGTATTTTACTGGTATTCTCTCTGAGCGT
TTATTGCGTGCAATGTTATGCTGTCAAAGATGAAAGCAACAAGAATGATA
CTGCTGTAATGAGCAGCGTTGAGATTCCAAATAAAAATTGCACCACGGAT
CAAAAATCTTTTGACGACTTTAAAATTAACATTCAACGTCAGGTAATgtc
tcaaaatggcagaataGAGACGCTGGAAATCGACCTTAACTCaataaaga
agaaattgaaatgtAATGGATGTCCAGAgaagaaaatattgaatattgaa
aatgCCACCAATATCCATATACTTAAGGACACAATTTCTGAACAACGCCA
AAGAATCGAATTGCTGGAAAATGAACTTGACACGTTGAAACAAGAAAGCG
ACAGTTGCAATAACAAGAATACTAGCTTGCCATCTTTCTTGTCGAAAACT
GATAAACTGATTTGGGGTGCTAAGAAATTCTTTAAAGGCGAGGAAATGGA
GTTTGATTTATACGGTTCCTATCAGCACTGGTATTCAAATATAACGAAAA
TTATGCGCAACAAAGTACAATACCAATCGAAAGATTTCGTATTCATCCGC
AAAGACATGGAACGCCATTTTACTGAAGAGTATTCCAAAGGTTTTTGGAA
GTccatttattttgtttcaaaacgcAAAAACTCACACTATCCTGAGGGAA
TGTCAACTCTTATTGTTGAAGGGATTGGAATCCAGCAATGGGAAAAAGGC
GTTTTTCTTTTACTCCACCCAACGAGTTTTGAGAAATGCTTGGAATTTGA
TCGTTATTCAAGAGATGATAGTGGTGAAGATGAGAGATGGAAAGTGGATG
AACAAACACCAGACTATTATTGGGGAGATAATAAATCAGTCattattttt
ggtattttaaataaaaacaatgctTAATTTTTGATACTTATTATACAATG
TGTACGAAAGTACCCAAATTAGCCCGGGCGTTTGCCACTGGTTCCATGCT
GCCAAAATCTTCAGGAGCCCTAATTACGTCATCACACGCAAAATTCTTAT
GGAGCGTCTTATAGGCAGTTTATTGTATTGTTTTATTTCTCTATATTTTC
TATTTAgaagttcttatttttttagtcaattttGCACCCCTTCA Coding sequence (CDS) from alignment at scaffold_97:500163..501406 >TCONS_00073761 ID=TCONS_00073761|Name=TCONS_00073761|organism=Clytia hemisphaerica|type=CDS|length=924bp|location=Sequence derived from alignment at scaffold_97:500163..501406 (Clytia hemisphaerica)
ATGAATTTATTCTCAAGTTGTATTTTACTGGTATTCTCTCTGAGCGTTTA
TTGCGTGCAATGTTATGCTGTCAAAGATGAAAGCAACAAGAATGATACTG
CTGTAATGAGCAGCGTTGAGATTCCAAATAAAAATTGCACCACGGATCAA
AAATCTTTTGACGACTTTAAAATTAACATTCAACGTCAGGTAATgtctca
aaatggcagaataGAGACGCTGGAAATCGACCTTAACTCaataaagaaga
aattgaaatgtAATGGATGTCCAGAgaagaaaatattgaatattgaaaat
gCCACCAATATCCATATACTTAAGGACACAATTTCTGAACAACGCCAAAG
AATCGAATTGCTGGAAAATGAACTTGACACGTTGAAACAAGAAAGCGACA
GTTGCAATAACAAGAATACTAGCTTGCCATCTTTCTTGTCGAAAACTGAT
AAACTGATTTGGGGTGCTAAGAAATTCTTTAAAGGCGAGGAAATGGAGTT
TGATTTATACGGTTCCTATCAGCACTGGTATTCAAATATAACGAAAATTA
TGCGCAACAAAGTACAATACCAATCGAAAGATTTCGTATTCATCCGCAAA
GACATGGAACGCCATTTTACTGAAGAGTATTCCAAAGGTTTTTGGAAGTc
catttattttgtttcaaaacgcAAAAACTCACACTATCCTGAGGGAATGT
CAACTCTTATTGTTGAAGGGATTGGAATCCAGCAATGGGAAAAAGGCGTT
TTTCTTTTACTCCACCCAACGAGTTTTGAGAAATGCTTGGAATTTGATCG
TTATTCAAGAGATGATAGTGGTGAAGATGAGAGATGGAAAGTGGATGAAC
AAACACCAGACTATTATTGGGGAGATAATAAATCAGTCattatttttggt
attttaaataaaaacaatgctTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073761-exon-scaffold_97-1491911889:500163..501406 | TCONS_00073761-exon-scaffold_97-1491911889:500163..501406 | Clytia hemisphaerica | exon |
| TCONS_00073761-exon-scaffold_97-1510915933:500163..501406 | TCONS_00073761-exon-scaffold_97-1510915933:500163..501406 | Clytia hemisphaerica | exon |
| TCONS_00073761-exon-scaffold_97-1575043694:500163..501406 | TCONS_00073761-exon-scaffold_97-1575043694:500163..501406 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_97 | supercontig | scaffold_97:500163..501406 . |
Blast
The following BLAST results are available for this feature:
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