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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073758 ID=TCONS_00073758|Name=TCONS_00073758|organism=Clytia hemisphaerica|type=transcript|length=719bp CTTTGTATTCATcatcaattcaattttcattatcACTTTGCTGGTAATGT TAGTCTGTTACGCTCTCATCATCGcatacatcaaaagtacaaAACAGTCT TTAAAAGATTTCCAGAACACAAAAGTTAACGTCAGCCAACAGACCCTATC ATTACAAATGAAAGCAGCACGGAAAGTAACTGTTTTGGTTCTATGTTATG TAGTCTGTTTTCTACCTATCGTAGCTTGTATTTTGATAAACTTGTTTTAT GTTGATGGGAGAAAAGTACGGACAGAAGCTCTGGAGACAGTATTTTTATT CGCAGACTTCATATCGTGTTTTAACGCTTTTCTTAATCCATGGATTTACA CcaccaaatttaaaaacttgAAACGCTCAACAAAATACAGACTTATAAAG GAAGATCATACGAGACGGAAAAATTACGGCGCAGTTCTAGGGCAATAGAA TAATGTTCATTATCACCAAAAAGTTGCCTGTATCACACGTCATACATATG GAAATTTCATACAACTTTTTCGGGTAATCTTTTATGCcgggaaaaaaact ttttatgaaaatctTTGCCATAACCCTGAACTTCTAAAGCGGAATGATGT ACAATCATGGtgagtatttcaattcgggagggatTTGTAGACTTCCAGGC TACATTCTGAGCcatattggaccatttttgaacttttagatccttagatc ctaagctcctaagtctagc Run BLAST on NCBI protein sequence of TCONS_00073758-protein >TCONS_00073758-protein ID=TCONS_00073758-protein|Name=TCONS_00073758-protein|organism=Clytia hemisphaerica|type=polypeptide|length=148bp
FVFIINSIFIITLLVMLVCYALIIAYIKSTKQSLKDFQNTKVNVSQQTLS LQMKAARKVTVLVLCYVVCFLPIVACILINLFYVDGRKVRTEALETVFLF ADFISCFNAFLNPWIYTTKFKNLKRSTKYRLIKEDHTRRKNYGAVLGQ Run BLAST on NCBI transcript from alignment at scaffold_97:312506..313224 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073758 ID=TCONS_00073758|Name=TCONS_00073758|organism=Clytia hemisphaerica|type=transcript|length=719bp|location=Sequence derived from alignment at scaffold_97:312506..313224 (Clytia hemisphaerica) gctagacttaggagcttaggatctaaggatctaaaagttcaaaaatggtc
caatatgGCTCAGAATGTAGCCTGGAAGTCTACAAatccctcccgaattg
aaatactcaCCATGATTGTACATCATTCCGCTTTAGAAGTTCAGGGTTAT
GGCAAagattttcataaaaagtttttttcccgGCATAAAAGATTACCCGA
AAAAGTTGTATGAAATTTCCATATGTATGACGTGTGATACAGGCAACTTT
TTGGTGATAATGAACATTATTCTATTGCCCTAGAACTGCGCCGTAATTTT
TCCGTCTCGTATGATCTTCCTTTATAAGTCTGTATTTTGTTGAGCGTTTc
aagtttttaaatttggtgGTGTAAATCCATGGATTAAGAAAAGCGTTAAA
ACACGATATGAAGTCTGCGAATAAAAATACTGTCTCCAGAGCTTCTGTCC
GTACTTTTCTCCCATCAACATAAAACAAGTTTATCAAAATACAAGCTACG
ATAGGTAGAAAACAGACTACATAACATAGAACCAAAACAGTTACTTTCCG
TGCTGCTTTCATTTGTAATGATAGGGTCTGTTGGCTGACGTTAACTTTTG
TGTTCTGGAAATCTTTTAAAGACTGTTttgtacttttgatgtatgCGATG
ATGAGAGCGTAACAGACTAACATTACCAGCAAAGTgataatgaaaattga
attgatgATGAATACAAAG Coding sequence (CDS) from alignment at scaffold_97:312506..313224 >TCONS_00073758 ID=TCONS_00073758|Name=TCONS_00073758|organism=Clytia hemisphaerica|type=CDS|length=447bp|location=Sequence derived from alignment at scaffold_97:312506..313224 (Clytia hemisphaerica) CTATTGCCCTAGAACTGCGCCGTAATTTTTCCGTCTCGTATGATCTTCCT TTATAAGTCTGTATTTTGTTGAGCGTTTcaagtttttaaatttggtgGTG TAAATCCATGGATTAAGAAAAGCGTTAAAACACGATATGAAGTCTGCGAA TAAAAATACTGTCTCCAGAGCTTCTGTCCGTACTTTTCTCCCATCAACAT AAAACAAGTTTATCAAAATACAAGCTACGATAGGTAGAAAACAGACTACA TAACATAGAACCAAAACAGTTACTTTCCGTGCTGCTTTCATTTGTAATGA TAGGGTCTGTTGGCTGACGTTAACTTTTGTGTTCTGGAAATCTTTTAAAG ACTGTTttgtacttttgatgtatgCGATGATGAGAGCGTAACAGACTAAC ATTACCAGCAAAGTgataatgaaaattgaattgatgATGAATACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00073758-exon-scaffold_97-1491911889:312506..313224 | TCONS_00073758-exon-scaffold_97-1491911889:312506..313224 | Clytia hemisphaerica | exon |
TCONS_00073758-exon-scaffold_97-1510915933:312506..313224 | TCONS_00073758-exon-scaffold_97-1510915933:312506..313224 | Clytia hemisphaerica | exon |
TCONS_00073758-exon-scaffold_97-1575043694:312506..313224 | TCONS_00073758-exon-scaffold_97-1575043694:312506..313224 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_97 | supercontig | scaffold_97:312506..313224 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
Term | Definition |
GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
Term | Definition |
GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
cellular_component |
GO:0016021 |
integral component of membrane |
molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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