Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073750 ID=TCONS_00073750|Name=TCONS_00073750|organism=Clytia hemisphaerica|type=transcript|length=1546bp
CTGTAATTTAATCTTGCTTGGTTGCTATTAGATACGACTAGATATAAAAG
ATAACGGAGGTTCTCTTCTCTCTTttagaagttgattttttgttGAAGTC
TTATTTATTTGCTCTGTTTGAGAGGTGATGTCTCTGCTGAAATGTTGTGT
TTAAGATCTAGGgtttttgagagatttttgGTGCTGAGATTTGGTTTGCA
GGTTGATGTACTAAAGTCACCAAAGGGTGATTAGCTATATTAGCAAAATA
CCATCTATGACATGGTGTCAGGGTAGCCTAGGTATCTAAGCCAGTTTTCA
GTCACTTGCTATAAAATATGAAAGTTCAGCGCTAACTTAAATTTCACgga
tataaaaaaatcattaaagcacCGAAAAACGCTATGCATTTATATACAGT
ATATCGCGCGCTGTAATATCTGGCTTGATTAATCAGGCTAGTGCCAGGGT
AAGGTACATGAGAAGAATGCTGATAATCTTTTAGAAGTGATGTTTCCGAT
GTGtttaaggtttttaaaaaaatctttgctGGAAGGGATTTTTGGAGCTG
TGATTTGGTTTCCCAGATTGATGTACTAAAGTCACTAAAGCTTAAATGAA
GTACCTGAGATGGCTTCAGGGTTTATAAGAATGCGAATAATCTTTTAGAA
GTGATGTATCTGATGAAAAATGCTGTGTTTAAGGTTTTTTAAAAGAGATC
TTTTCTGGAAGGTTTTTTTGGAGCTGAAATTTGGTTTTCTAGATTAATGT
ACTAAAGAGTGATTAGCTTAAGTGATATTTATCTATGAGCCTTTTGATTT
AAAGGCGATATTTAGATTATGTGTATACCTAcatgtttccaatttttgta
tactttcacttttgatttGTTTGCTGGAATTtggtcattccattttatat
ccatacagggagTTGGACGagcatttccagggggtaaaagactgatttta
gttcgtccaccctcacttttagGGTAtgcaaataatttttccaagaatat
ttttggaaatttttcaatttcccaGGGGGGGGGCACACGTTTCTAAGAAT
CAGTTTCGAAATTTTATGAATGACCCAATACAGTAGGACTCAATTGTTGT
TTATTCTAGGGCCATTCCTATTTTGACTTAGGTAACTGACCTGACTGCCT
GCATGCCTTAATTACTAAAGGGAAATTTAGATTCAAGAACTAGtcagtca
gaaagaaaagacatctttttattctgctactggcagttttatgccacttt
tgtgacaatcttcaggcaactAAAACTATAGATTCAAGAACTAGAAACCT
TTTaagcttttaaactttttagtgttctgatgacgtcattctccACAACT
CGGAAGACTGGATCCAACAACAGAACGATTTTCgtgataattattttgct
ggtAAAAAACTTGATGAAAAACCTCATCAAACAGAAAGCTAGCGAATGTT
ATCAACTCTATTAGTAGAtggtttttataatttttgtataCATATagata
ttttttatcaataattaGTAAGATTATATGGAACTTAACAAGCATC Run BLAST on NCBI transcript from alignment at scaffold_97:215779..217324 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073750 ID=TCONS_00073750|Name=TCONS_00073750|organism=Clytia hemisphaerica|type=transcript|length=1546bp|location=Sequence derived from alignment at scaffold_97:215779..217324 (Clytia hemisphaerica)
GATGCTTGTTAAGTTCCATATAATCTTACtaattattgataaaaaatatc
tATATGtatacaaaaattataaaaaccaTCTACTAATAGAGTTGATAACA
TTCGCTAGCTTTCTGTTTGATGAGGTTTTTCATCAAGTTTTTTaccagca
aaataattatcacGAAAATCGTTCTGTTGTTGGATCCAGTCTTCCGAGTT
GTggagaatgacgtcatcagaacactaaaaagtttaaaagcttAAAAGGT
TTCTAGTTCTTGAATCTATAGTTTTagttgcctgaagattgtcacaaaag
tggcataaaactgccagtagcagaataaaaagatgtcttttctttctgac
tgaCTAGTTCTTGAATCTAAATTTCCCTTTAGTAATTAAGGCATGCAGGC
AGTCAGGTCAGTTACCTAAGTCAAAATAGGAATGGCCCTAGAATAAACAA
CAATTGAGTCCTACTGTATTGGGTCATTCATAAAATTTCGAAACTGATTC
TTAGAAACGTGTGCCCCCCCCCtgggaaattgaaaaatttccaaaaatat
tcttggaaaaattatttgcaTACCctaaaagtgagggtggacgaactaaa
atcagtcttttaccccctggaaatgctCGTCCAActccctgtatggatat
aaaatggaatgaccaAATTCCAGCAAACaaatcaaaagtgaaagtataca
aaaattggaaacatgTAGGTATACACATAATCTAAATATCGCCTTTAAAT
CAAAAGGCTCATAGATAAATATCACTTAAGCTAATCACTCTTTAGTACAT
TAATCTAGAAAACCAAATTTCAGCTCCAAAAAAACCTTCCAGAAAAGATC
TCTTTTAAAAAACCTTAAACACAGCATTTTTCATCAGATACATCACTTCT
AAAAGATTATTCGCATTCTTATAAACCCTGAAGCCATCTCAGGTACTTCA
TTTAAGCTTTAGTGACTTTAGTACATCAATCTGGGAAACCAAATCACAGC
TCCAAAAATCCCTTCCagcaaagatttttttaaaaaccttaaaCACATCG
GAAACATCACTTCTAAAAGATTATCAGCATTCTTCTCATGTACCTTACCC
TGGCACTAGCCTGATTAATCAAGCCAGATATTACAGCGCGCGATATACTG
TATATAAATGCATAGCGTTTTTCGgtgctttaatgatttttttatatccG
TGAAATTTAAGTTAGCGCTGAACTTTCATATTTTATAGCAAGTGACTGAA
AACTGGCTTAGATACCTAGGCTACCCTGACACCATGTCATAGATGGTATT
TTGCTAATATAGCTAATCACCCTTTGGTGACTTTAGTACATCAACCTGCA
AACCAAATCTCAGCACcaaaaatctctcaaaaacCCTAGATCTTAAACAC
AACATTTCAGCAGAGACATCACCTCTCAAACAGAGCAAATAAATAAGACT
TCaacaaaaaatcaacttctaaAAGAGAGAAGAGAACCTCCGTTATCTTT
TATATCTAGTCGTATCTAATAGCAACCAAGCAAGATTAAATTACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073750-exon-scaffold_97-1491911889:215779..217324 | TCONS_00073750-exon-scaffold_97-1491911889:215779..217324 | Clytia hemisphaerica | exon |
| TCONS_00073750-exon-scaffold_97-1510915933:215779..217324 | TCONS_00073750-exon-scaffold_97-1510915933:215779..217324 | Clytia hemisphaerica | exon |
| TCONS_00073750-exon-scaffold_97-1575043694:215779..217324 | TCONS_00073750-exon-scaffold_97-1575043694:215779..217324 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_97 | supercontig | scaffold_97:215779..217324 . |
Blast
The following BLAST results are available for this feature:
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