Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073745 ID=TCONS_00073745|Name=TCONS_00073745|organism=Clytia hemisphaerica|type=transcript|length=1728bp
CAAATTGGCGAGAAAGAGTATTCCGAGATTTGACTTTATGTATTTCGAAC
GCAATTGTATAGCTATACATTGAAAtgataaaactttctttttatggAGT
TAAAAATAACTAATAACAGTGTTCAATAAAGCGAATTAAATaaccaaaaa
tctaagaatacTACTAGGttctacaaaataaaatttataaaaaattttga
atttattgaatatcaatacaattgttcttaatttcacacgaactatgaaa
ttttgaagtcgATGCAGTGTCAAGAAAAAGTTTCAACAGTGAAAACCAAA
GTTTCTACTGTAACCACTGATCTTTATATActctggaccaagtttctcaa
ttgCGACCAAGTAAAATCATTGATCGGACGTTTTTGAAAAgataccctaa
tggcggcactactcaatagcggtgtaaatgcatcgagagcgctatgTAGA
CTTTCCCTCGAATAATTCTGacgatgtagcgccgttagacgttaattttt
aaagcCATTGCAGATGGCTTCTTTGCAGGTAACccttcaaaaaaacttcg
atcaaagatggcggatatagcttggtccagggatatatatataaaggtca
gtgactgtaaagatggcggattattttTCTTCACCTGCCGTTGCTTTAGA
AATACAAAGCATACAGTAATTTATACAAGATATATATGGTACatcccatt
gagtttcaagccctaAGGGCtggaggcgagactcctggatgggaaatgaa
accacttattttccatccagaacgccagcgcgtagtttttacataAACGT
CGAAtcgaaactaaaatctatcgctagatttaaaaaatgtagtcctccaa
aacaaaggaaccgctagatacaatccgtcgtcatgattacggcacGTTCT
CTgagcgttttggatgggaaataagtggcttcaatttctcttgcctgaga
agggtcaaagtttcgcctctaacccttcgggcttgaaactcaatggttca
tCCCCTACATTGTAGATCAGCATCATGATTAGTCTGAAAATGGACGGGAT
TTGCCTAATTAAATACTTTCAGCAtgtcatgtagaaaaaaacaccgaata
ttaaaaaaaaattcttttgtgtaaaaaaatgttgataaatttgcaaataa
acaaaattatattattcAACTCAAAACCGAAAATCAGCTGTTACTTTCCA
CGGAAAGATTATAAAATGCCTTTTCTTGCTGACTAATAAATGGCGGATTA
AATAGTTATTCGAATTTCCTAGCTCTGCTAATTGCCGGTTCAGATCAAAT
TAAAATTGCCTTCAGATTAAACCTAGTTCTACTAATTTGCAGTAAAGGCC
GAACTAAAATTGCCAATAGATTTAACCTTATTGAAATTTAGAGCCATAAA
GTTCCTACCCTTGATCCATGGGAGCCGTGGAAACCATGTCAGTTTAATTA
GACTAACTCCCTTGAGAATGGTTTCTATATTGTCTTCAGATTAAACCCAA
TTGAAATTCGCAGAATCATAAAGTTCCTAACCTTCAAATATATATGGAAA
CCATGTCGGCATAATTAAGAGTAATTCCTTTGAGAATGGTTTCTATATGG
TATTCAGATTAAACCAAATTGAAATTCGCAGAACCATAAAGTTCCTAACC
TTCAAATATAATCCATCACCATAAAAGAATGAAAGATTTACAACAACGAG
TTGAACTTACCGTACggtaatgggctct Run BLAST on NCBI transcript from alignment at scaffold_97:105497..107224 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073745 ID=TCONS_00073745|Name=TCONS_00073745|organism=Clytia hemisphaerica|type=transcript|length=1728bp|location=Sequence derived from alignment at scaffold_97:105497..107224 (Clytia hemisphaerica)
agagcccattaccGTACGGTAAGTTCAACTCGTTGTTGTAAATCTTTCAT
TCTTTTATGGTGATGGATTATATTTGAAGGTTAGGAACTTTATGGTTCTG
CGAATTTCAATTTGGTTTAATCTGAATACCATATAGAAACCATTCTCAAA
GGAATTACTCTTAATTATGCCGACATGGTTTCCATATATATTTGAAGGTT
AGGAACTTTATGATTCTGCGAATTTCAATTGGGTTTAATCTGAAGACAAT
ATAGAAACCATTCTCAAGGGAGTTAGTCTAATTAAACTGACATGGTTTCC
ACGGCTCCCATGGATCAAGGGTAGGAACTTTATGGCTCTAAATTTCAATA
AGGTTAAATCTATTGGCAATTTTAGTTCGGCCTTTACTGCAAATTAGTAG
AACTAGGTTTAATCTGAAGGCAATTTTAATTTGATCTGAACCGGCAATTA
GCAGAGCTAGGAAATTCGAATAACTATTTAATCCGCCATTTATTAGTCAG
CAAGAAAAGGCATTTTATAATCTTTCCGTGGAAAGTAACAGCTGATTTTC
GGTTTTGAGTTgaataatataattttgtttatttgcaaatttatcaacat
ttttttacacaaaagaatttttttttaatattcggtgtttttttctacat
gacaTGCTGAAAGTATTTAATTAGGCAAATCCCGTCCATTTTCAGACTAA
TCATGATGCTGATCTACAATGTAGGGGatgaaccattgagtttcaagccc
gaagggttagaggcgaaactttgacccttctcaggcaagagaaattgaag
ccacttatttcccatccaaaacgctcAGAGAACgtgccgtaatcatgacg
acggattgtatctagcggttcctttgttttggaggactacattttttaaa
tctagcgatagattttagtttcgaTTCGACGTTtatgtaaaaactacgcg
ctggcgttctggatggaaaataagtggtttcatttcccatccaggagtct
cgcctccaGCCCTtagggcttgaaactcaatgggatGTACCATATATATC
TTGTATAAATTACTGTATGCTTTGTATTTCTAAAGCAACGGCAGGTGAAG
Aaaaataatccgccatctttacagtcactgacctttatatatatatccct
ggaccaagctatatccgccatctttgatcgaagtttttttgaaggGTTAC
CTGCAAAGAAGCCATCTGCAATGgctttaaaaattaacgtctaacggcgc
tacatcgtCAGAATTATTCGAGGGAAAGTCTAcatagcgctctcgatgca
tttacaccgctattgagtagtgccgccattagggtatcTTTTCAAAAACG
TCCGATCAATGATTTTACTTGGTCGcaattgagaaacttggtccagagTA
TATAAAGATCAGTGGTTACAGTAGAAACTTTGGTTTTCACTGTTGAAACT
TTTTCTTGACACTGCATcgacttcaaaatttcatagttcgtgtgaaatta
agaacaattgtattgatattcaataaattcaaaattttttataaatttta
ttttgtagaaCCTAGTAgtattcttagatttttggttATTTAATTCGCTT
TATTGAACACTGTTATTAGTTATTTTTAACTccataaaaagaaagtttta
tcaTTTCAATGTATAGCTATACAATTGCGTTCGAAATACATAAAGTCAAA
TCTCGGAATACTCTTTCTCGCCAATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073745-exon-scaffold_97-1491911889:105497..107224 | TCONS_00073745-exon-scaffold_97-1491911889:105497..107224 | Clytia hemisphaerica | exon |
| TCONS_00073745-exon-scaffold_97-1510915933:105497..107224 | TCONS_00073745-exon-scaffold_97-1510915933:105497..107224 | Clytia hemisphaerica | exon |
| TCONS_00073745-exon-scaffold_97-1575043694:105497..107224 | TCONS_00073745-exon-scaffold_97-1575043694:105497..107224 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_97 | supercontig | scaffold_97:105497..107224 . |
Blast
The following BLAST results are available for this feature:
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