Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073737 ID=TCONS_00073737|Name=TCONS_00073737|organism=Clytia hemisphaerica|type=transcript|length=1022bp
aaaaaaaaatcagaaatcttCACAAGGAGAAATCTTCTGTATCcacaaga
caagacaagacatGGTTGGTCAACAATATCTTCTAATTTTCTTATTGAAC
TTGAATTTTATCGCTTTCAAACATTGTGCTATGTGTAAAAAGAAAACCAT
TGAAAACAACCATGGTGTGAAACCGATGGTCTTTATCgatgaaaatgaag
tGAGCGTGACACAGAATAATCTATTAAAGGTGATAGATCGTTTTTCAACA
GAATGGAGTATAATGTTTTCAATGCGATTATCCACATCAATACCATCTGG
TAACGACGGAAAAGCTACATGTAATATAATTAATTTATCAGAAGATAATA
TTGAGAGTTCTCATTATGGCGCCCGTACTCCATTTGTGGGGTTAAGGAAA
GATAATAGAGAAATACATACCACATCTGCTATTAACGGGGACTGGAATGG
AATTAAGGAGCTGACACCTGTTATCATTGATCAAACCTATCACCTTGAAA
TTCACCAAAGATATGTCAGCAATGGTCATTACAGATATTTCATCTTGATT
GATGGAATTGAAGTTTACAGTGTATTGAACACTGACGCTCAGCAGTTTTA
TAATGTTCATGTGTATGCAGGAAACCCGTGGAATGAGCCTTGCCCTGTGT
ACATCAGTAATTTTAaattaacaaactttttgtAATAATTAATACTAGCA
GTTCCAGCGTCGTCTGAGACGActcttttgcaatttttttttcgcttcCC
TCACTTTAATTTTTCCGTCAAACTCTCgataatttgaaaaactttggtgC
CAAGATAAAGGAGTGAAattaaaagcatgaaattcttAGAGTAATGGCAA
CAAATACCATGCGAATAAAATAGTTGTTGTTTATCAAAGAAATTGattaa
ataaatctattgtcgatttcatgaacaaattttatgactcaaagtaattc
gaacattcgatcatgggagtgttttatgtgaatctttgggcatactggag
aagtgggacgtgggacggtggg Run BLAST on NCBI transcript from alignment at scaffold_97:1059424..1061408- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073737 ID=TCONS_00073737|Name=TCONS_00073737|organism=Clytia hemisphaerica|type=transcript|length=1985bp|location=Sequence derived from alignment at scaffold_97:1059424..1061408- (Clytia hemisphaerica)
AAAAAAAAATCAGAAATCTTCACAAGGAGAAATCTTCTGTATCCACAAGA
CAAGACAAGACATGGTTGGTCAACAATATCTTCTAATTTTCTTATTGAAC
TTGAATTTTATCGCTTTCAAACATTGTGCTATGTGTAAAAAGGTAATACG
AAAATCATTAGAAAAAAAATTCGGGATAAAAAAAGATTTGTTTCACTTTA
AGTGTGTACTAATCTTTGTTTTATTGTTCAACGAATGCTTCGAATCTAAC
ATATTATAAACCGTTGAAAAGATAATTTAGAGCACTTTTATCTGTAACAA
ATATTACTTTTTTATAAAAATTAAATGCCTTAGAAGCTTTAACCTTATGA
AGGCTTTTTTCAACATATAAAACATTTTCATTTTGTTATAGAAAACCATT
GAAAACAACCATGGTGTGAAACCGATGGTCTTTATCGATGAAAATGGTAA
GAAACGCTTTACTGGGGAGTTGAGCGAATATTATGTTAAACCCTTCTTTA
GAGAATATTGTTTTTCCTAAAATAAGTTTGTGGACGTGTTACGGAGATAT
TAACATATGAGTAATACACGTTATTTTATTAAAAAAAAAGCCCTTTCTCA
CCGTACGTACCATACCCAACACCTATATCTGTCTAAGCCCCCCCCTTGGA
GGTTAAAAAGAGATATTTTTAATAACCTACACATCACTGATTTGGCTTTA
CCAGAAAAGAAATTTTACCCCCACTGTCGAGGATAATGATTTTTCAAAGT
ATCGAACCCCCTGGATATCCTACTTTATTAGTAAAGAACTCCTGGATATC
CACTCTTAAGAATATGCTCAGCCCCCTGGATATTCTCTCTTATAAAGATG
CTTACCCCTGGATATCGTATTTTTTACTTGAAAGACACTTCACCCCTGAA
TATCCGCTTCCTTGTAGATATTTAACCCCCTGGATTTCCACTTTTGAACA
AAAATCGTTAACCCCCTGGATATCTGATATCCTCGACAGGGGGGGGGGCG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGG
GGGCACGGACTATTTCTGGAAAAGCCCATTACGAACTTTATTGCATATTT
TTATTTTCAGAAGTGAGCGTGACACAGAATAATCTATTAAAGGTGATAGA
TCGTTTTTCAACAGAATGGAGTATAATGTTTTCAATGCGATTATCCACAT
CAATACCATCTGGTAACGACGGAAAAGCTACATGTAATATAATTAATTTA
TCAGAAGATAATATTGAGAGTTCTCATTATGGCGCCCGTACTCCATTTGT
GGGGTTAAGGAAAGATAATAGAGAAATACATACCACATCTGCTATTAACG
GGGACTGGAATGGAATTAAGGAGCTGACACCTGTTATCATTGATCAAACC
TATCACCTTGAAATTCACCAAAGATATGTCAGCAATGGTCATTACAGATA
TTTCATCTTGATTGATGGAATTGAAGTTTACAGTGTATTGAACACTGACG
CTCAGCAGTTTTATAATGTTCATGTGTATGCAGGAAACCCGTGGAATGAG
CCTTGCCCTGTGTACATCAGTAATTTTAAATTAACAAACTTTTTGTAATA
ATTAATACTAGCAGTTCCAGCGTCGTCTGAGACGACTCTTTTGCAATTTT
TTTTTCGCTTCCCTCACTTTAATTTTTCCGTCAAACTCTCGATAATTTGA
AAAACTTTGGTGCCAAGATAAAGGAGTGAAATTAAAAGCATGAAATTCTT
AGAGTAATGGCAACAAATACCATGCGAATAAAATAGTTGTTGTTTATCAA
AGAAATTGATTAAATAAATCTATTGTCGATTTCATGAACAAATTTTATGA
CTCAAAGTAATTCGAACATTCGATCATGGGAGTGTTTTATGTGAATCTTT
GGGCATACTGGAGAAGTGGGACGTGGGACGGTGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073737-exon-scaffold_97-1575043694:1061267..1061408 | TCONS_00073737-exon-scaffold_97-1575043694:1061267..1061408 | Clytia hemisphaerica | exon |
| TCONS_00073737-exon-scaffold_97-1575043694:1060963..1061017 | TCONS_00073737-exon-scaffold_97-1575043694:1060963..1061017 | Clytia hemisphaerica | exon |
| TCONS_00073737-exon-scaffold_97-1575043694:1059424..1060248 | TCONS_00073737-exon-scaffold_97-1575043694:1059424..1060248 | Clytia hemisphaerica | exon |
| TCONS_00073737-exon-scaffold_97-1510915933:1061267..1061408 | TCONS_00073737-exon-scaffold_97-1510915933:1061267..1061408 | Clytia hemisphaerica | exon |
| TCONS_00073737-exon-scaffold_97-1510915933:1060963..1061017 | TCONS_00073737-exon-scaffold_97-1510915933:1060963..1061017 | Clytia hemisphaerica | exon |
| TCONS_00073737-exon-scaffold_97-1510915933:1059424..1060248 | TCONS_00073737-exon-scaffold_97-1510915933:1059424..1060248 | Clytia hemisphaerica | exon |
| TCONS_00073737-exon-scaffold_97-1491911889:1061267..1061408 | TCONS_00073737-exon-scaffold_97-1491911889:1061267..1061408 | Clytia hemisphaerica | exon |
| TCONS_00073737-exon-scaffold_97-1491911889:1060963..1061017 | TCONS_00073737-exon-scaffold_97-1491911889:1060963..1061017 | Clytia hemisphaerica | exon |
| TCONS_00073737-exon-scaffold_97-1491911889:1059424..1060248 | TCONS_00073737-exon-scaffold_97-1491911889:1059424..1060248 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_97 | supercontig | scaffold_97:1059424..1061408 - |
Blast
The following BLAST results are available for this feature:
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