TCONS_00073662 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073662
Unique NameTCONS_00073662
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3167

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073662 ID=TCONS_00073662|Name=TCONS_00073662|organism=Clytia hemisphaerica|type=transcript|length=3167bp
AGCTTTTCATGATAATAAGTAATAAAATTCGAAGAAAAAGTAATACATAT
AATTTTCTATGGTTGGCACCTACTGGAGACATTTTGTTTAAACAAGGGCA
TCAGAGGGAACGttgtgaaattaaaaaatgcagAGTATTGTATTTGAACT
GTTCCAAGAGAATTTTCTTCCAGATCCTTGGTTTGCAGACAAGTATGGAT
TTTATGATCAAATCGAGAAATCTGACGAGAACGCTTTAGAATCACTTGCT
GACCATTTCGAATcactcagtggggataaagagCTCGGTTCATTAGAAGT
TTCACACGGTGTGAAATGGGAAAATTATTTGGTAGCACAAGGTACCGCAC
CACTACAGAAAACGGAGGAACTCAAAGCACTCGTCCGAAGTGGTATCCCA
CACGAATTCCGTGCGCGCGTCTGGGGCGATCTCGTCCGCCTGCGTAGTGA
TCACGAGCGGACGATTGCTGGGCAAGGCTACTATGCTAACTTAttgaaag
agaagaaaggagcTTACTCCCCGTCTGCCAAACAGATTGAATTGGACTTG
TTGAGAACGTTACCGAACAACAAATATTATGATACGCTTGAATCTGAGGG
GatttcaaaactACGACGCATTTTGACAGCGTACAGTTGGCATAACCCAG
CTGTTGGATACTGTCAAGGATTAAATCGTTTGGGAGCCATCGCACTGTTG
TATTTAGATGAAGAAACAGCTTTCTGgTGTCTTGTAGCGATCACTGAACA
TCTAATGCCAATTGATTATTACAGCAGAACACTGCTCGGTGCGCAAATCG
ATCAAAAAGTATTTCGTGACTTGTTGGACGAAAAATGTCCGAAACTGAGT
GCTCATCTTGTCTCCTTGCAGTTCGACATATCGTTGGTATCATTCAATTG
GTTCCTGACTGTTTTTGTTGATCTCTTTCCGATTGAGTTGACGTTAAGAG
TGTGGGATACATTTCTCTTCGAAGGTAGCAAGGTTTTATTCCGGTACGCA
TTGTCCGTCTTCAAACTTTTCGAAGAAGAATTCCTACGCTTTAAAGATCC
TGGACCGATGTTCAACTTTTTCCGAAATCTACCCAAAAAGAAATTCAACA
TTCAAAAGATTTGTTACATAGCTTTCAACACGATGAACCCCTTTAGTCGT
CGTAATGTGGAATCGAAAAGGAAATTCTACAGACCTATTCTTCAAGCACA
ACTTGACGAGTTTGAAATTATGCGTGAGGAATACAAGGAGAAACGGGAAG
ACAGTATTTCTATTCACGATGAAGAACCAATCAGTGACGACGAGAACTAA
CCATTGTCCAATCAGATGGCGAGAAATAGTATAGTTGTCCAATCAGGATC
CAAGGATTGATTTCATAATCCAATCAGATGGCGAGAAATAGTATAGTTGT
CCAATCAGGATCCAAGGATTGATTTCATAATCCAATCAGATGGCGAGAAA
TTGTTATGGTTGTCCAATCAGGATCCAAGGATTAATTTCATCATCCAATC
AAAATCGCGAGACCACATGAAAACTGTGATGTCACCATCCAATGAAAACA
CTAAGAATGATTGATAGCCAATCTGATCAAAGAAAAGGTTTGATTCTTTC
AAGTTGGACCAAAATCAAGATATGGCCACTCTTGTTATTTGTTAAAACAC
TGGAAACTAATGATTGACCAATGAGAAAACCCGATTTAATGTCGCAATTA
CTGTATAGATTTCTTTCATTAAAACGGAAGAGCTGATTAAACCTGGATAA
ATTccactaaaaatattttatggtTTTAGCTAAATTTCAACTGTTATTCT
CGCCTGAAATTTTGACTCGTTTTTGAGGTCACTCATTGATCAAAACTAAA
TGAAATAAATGGATACCAATATTTTTTATGTGAATACAAAATTCagttta
gtatttttttttcttaaggtgaggccaatttaatttgttgttttacgggc
caagcgaCCCAagaaagagggtcggtcgggcggttgaaaataaaaataaa
agtagaattttaccTATTAAAATCTCCTCAAAAGGCAGCAAAtctactac
atcttgacaaaaatgcgaaatagaaaataaaaaggcacaaaaaggtcgaa
ttctagtcgaattcatggataaaatgaaaaatagaacattaaattctcaa
aattttggaaaaacaaactcctatttcgaaaatttgggagtctgtaaagc
aatgaaaataaaaatgtgctaccaaaatgaattttatttttatttcgatt
tttgaaatttcagggttGTTTGGACCCgcaaaacaactaatcaaaatGGT
CTCGCCTAATCATATAATTGTTGATAGActgtaaatttttaaaagaattt
aaagTGTATATAATGCACCCTCGAACTTCTTCGAGTCACTAAATTGTCAT
AATTCAATCTCTTATTCGTTTTAAAAAGCAAACTTTAGTCATTAAAGGAT
AAAAAAGGGAGCCTCGTTACCTACAGCAatgttttaaaacaatttttggc
TTCCATTTCcctatttttgagagggaggtcTTGTAATAGACAACACAAGG
TATTCTGTCATCCATCGTTAAGttacgtaaataaagcctgggatacacag
gGACCAGGATTCGTGCACATATATCTTGATTAAtgatattcatgacgtaa
tgttttctacggaaatactccggtttttgccagtagtggcaaatttaact
TTTATCTAGTTTAAATATAATATTATGAATATTATTGAAACATTattgaa
tatcatgaataagatCTTAATTTAGCATTTGGCAATTTCTTTCCAGGGAT
ATTTTTACTCATTCGGGATAAGAGTTAAAAACTTACCTTCATATAACGAA
TTAATTAAGCTGAATTCAGGGTAtagatttttttacttttgatttatatt
ttttgaaattaatttaaattataAGCTTCGATTTTTGTTAATTATATAAA
TGATAACTGGGAAATTCTATTGTCTTTCTTGTAAATATTCAGAggatttt
tttatatgtttttttttttgcaatttagtttttcttattctttttatATA
CCAGGataacaataatttttttaatttattacgATTCTACAGATTTTATT
TCCTAAATTTATTGCTaatattttttcagttttaaatcAAGATAATTCTT
TGACAATAAAATATAAC
Run BLAST on NCBI

transcript from alignment at scaffold_97:462563..474055+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073662 ID=TCONS_00073662|Name=TCONS_00073662|organism=Clytia hemisphaerica|type=transcript|length=11493bp|location=Sequence derived from alignment at scaffold_97:462563..474055+ (Clytia hemisphaerica)
AGCTTTTCATGATAATAAGTAATAAAATTCGAAGAAAAAGTAATACATAT AATTTTCTATGGTTGGCACCTACTGGAGACATTTTGTTTAAACAAGGGCA TCAGAGGGAACGttgtgaaattaaaaaatgcagAGTATTGTATTTGAACT GTTCCAAGAGAATTTTCTTCCAGATCCTTGGTAATAAGATTTAGCAAAAA TTGCTTTCGCATTTTTTCCGTTAGGCCAATATAACTCCCCAATATAACTT GAATTTCAGCTTCACtatgttttttttaagtttgaaagTCAATGCTAATG TCGGAGCTATTGCCCTTTAAAAACGTTTTCTACCAGTCTTGAATTCACta actttttcacattggattgatacggatgtggagcaagaaagaggaaaaga aaagcatttttgTGCTTATATCAgtacaatataacaataggcagacaatg tcctggtatgaaatatgtgtctgatatgaaacgggaacacttatgtagaa ataaaacctttaagagtATAGTAGGGTAGAGATATCTgtattaacttttc ctaatcatttgATATTTCTCTAGGTTTGCAGACAAGTATGGATTTTATGA TCAAATCGAGAAATCTGACGAGAACGCTTTAGAATCACTTGCTGACCATT TCGAATcactcagtggggataaagaggtatttttgaaaaacaaacttcaa gCAATTCTGATTATcaattacattttattttcttaagGCTTTGGGACAGG AGAAATCTTTTTCGCGTTGGTTCAATGCAACATgatccatcccaccaacc tgaaacgtaTTCTCGTGTCCCCACCCTATtcttctttctaccaataataa aagtgaaatctcattgttgtccctgggacaatggagtaAAAtcgattcga atcaattttgttCCATTGTCCTAGGGACAAaattggtgggatggagcatg taaaatgtaaaatacaaaagtttTCATGAGACAAATTTACATTTCAATAA AGTATAGAAAGATATATTTCTGTTTccaaattctgcaaaatttccaaaaa tttcaagaatatatgCTAATTCGCTTGTTAAAAACCCATTATCCGTCTCA CACGTAAcgccttgctttgaccactaaAAAGTTCTCTCTACATTAATATG TCTTCCAGGGTTATCGATTGAGGAATGACCTTGCTGGCTCATAATTTACT TACACTTTTCTTATTCTTTAGCTCGGTTCATTAGAAGTTTCACACGGTGT GAAATGGGAAAATTATTTGGTAGCACAAGGTACCGCACCACTACAGAAAA CGGTACGTCATGGCTCGGAATATAAATTTCATTATTGGTCCGATCAGGGT TGtcttagtttgaaaattatgatttttggatCGAACAAGgataaatttca gaaatttggGTCAGACAATGTTCGACCGTTCTTTTCAAGTCCAGTTTGTG TTCCCATTTCTGTAAGTTTTTGGAccgtcctataaattaacccatgtccg ttcgtccgtccgtccgtccgtccgtccgtccgtccgtctgtccgtccgtc tgttaccagcttttctcaggattggctcattagttttttttgatttttgg cacaatgatgcaaaatggtaatgcctaaaatgtgacggagcccgattttc gaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNaatcttttccggtcgaaaatgccggaaatatgccggaaa tcgccatttttgcagattttcatcggactttttccttatatttcgttgtt ttttcacacaaaaacataattaatagcaatgcccaccatgaagcatggtt caatcgtcaatagaaCTGAGTATTGAAgtcggaactttctaaaaatcgcc gatgcagcccattttcgccggaaaaacggtatttcttgattttctcgagc tgtactttatgtttttttatgaaattttgcacactgatgcaaaatgataa tacctaaaatgtgacagagcccgaatttcgaaaaacatctttttccggcc gaaaaagccggaaatatgccggaagtattgtttttttggcattttctcga gattttatcattagttttttctgattttttgcacaacaatgcgtattaac aatgcccaaaacatggccgagtccgatttttgagaaaattttatttccgg cagaaaatgcctgaaatatgccggaaatcgccgttttctgGGTTTTCATT GGGCTTGTTCCTTTtaaatggttgttttttcattcaaacacattattaat agcaatgtccaccatcaagcatgtttcaattgtcaataaaactgattttt gcgaccacaactttctatttattttttccttacaaccctttcctctcccc ccccccatcaacaatcaatgatgaattttttgcgttatgcatttttgtta aacgctatattttctgactgatttttttcatttttctcctcgcattgctt tctaactttcatcatcaggtaggtctattcagcatctagcttgttataTG TAAGTTTAGCTATGTAAAGTGCGCCACCCTAATTTCTTACTAGTTTTAAC CAGTGTCAAAAGCATTCAGAAAGTATCGCTAACTTATCATTGACCCTTAA AACCTTTTACATTTTTCAGGAGGAACTCAAAGCACTCGTCCGAAGTGGTA TCCCACACGAATTCCGTGCGCGCGTCTGGGGCGATCTCGTCCGCCTGCGT AGTGATCACGAGCGGACGATTGCTGGGCAAGGCTACTATGCTAACTTAtt gaaagagaagaaaggagcTTACTCCCCGTCTGCCAAACAGATTGAATTGG ACTTGTTGAGAACGTTACCGAACAACAAATATTATGATACGCTTGAATCT GAGGGGGTGAGTAATTTGATATTATTGTCcctagtggaaaattatactct aatttctGTACCCACTGAAAATattcagataagcaaatcctcagcGCTGA ATATAGTGCTACTTTTCTATcgccactgaattttctggctcgaaaacaat ggaattcaaatcctcagccataaaaaacatgggaatatcaatccccatca agtttgGTCCGtcaattttacccccactggccgAAAAAATTCCTACCTAC CCAACATTTTTCTATATGTCAAGAGGAGTGTACTAGAATGAAAGTGTTAC AATTCTTTAAAAGAAACCTCGATAATTTGACTTTTCTgacttttcatttc tttttttcagatttcaaaactACGACGCATTTTGACAGCGTACAGTTGGC ATAACCCAGCTGTTGGATACTGTCAAGGATTAAATCGTTTGGGAGCCATC GCACTGTTGTATTTAGATGAAGAAACAGCTTTCTGGTAAGAGaattattg ttgttttttgagaCGAAAATTTTCTTATGTGAAACCCTTCAGGTTTTCTG CCTTTCGCAGATCAAAATTACCAGTTTATGTATTGGAGGATGttgagggc gacggtaagtgaagccaacgcaaaacaaagtcgaaAGTTGATATAccgct ctatatcgcctttgctaacctaacagacgacggtattttggtatttttac cgtcgtcgagccaAAGTGAACGGTGATTTTGgtgacatgtcaactttgct ttaaaCCGTCTCCCACGATTTATTTCGagtacataaactcgctattgaaa agaaaaactgttctcttttaatttaaaaacatgCCTTTAGAATCGTTTTA AGTTATTATGTTTCTCAAAATTGCCTAAAGCATGCAGTGTCAAAAGTTAA AAGAGGAGACGGAACGAAAACAGTGTCAAAAGTTAATTTACCATTTGTAT TTGTATCATTTTCCAtcaattttcttccttttctttttgttttaggTGTC TTGTAGCGATCACTGAACATCTAATGCCAATTGATTATTACAGCAGAACA CTGCTCGGTGCGCAAATCGATCAAGTGAGTAAAGTCGTGGCTTTCAAGGA AAGGCTACTGAAGTCTGAAGAAATCGTTTTCTTGTTCCTTCAACTAGCAA TATAactcaaatttaaatttctccCTGGCGTGTTCGAGCAATGGAGACTG CATTGTATATAATTGTATATTCAATGTCGAAGACCTAAACAGCTATAGTT TAGGTGTTTTTGTGTCCGTTTCGCCCTCTCGACATACATCTCAATGCATG GTTTATTATTTAGCTTATTACATATTAGGTAGATTTTTCCatatattttt aatattatttttgttCCTTTCCAGAAAGTATTTCGTGACTTGTTGGACGA AAAATGTCCGAAACTGAGTGCTCATCTTGTCTCCTTGCAGTAAGTTATTT TCAATTGTTATGGTTATAATAATTGtgttagctctagtttagacggccta CTTCTGaactgcctattctaattgctaGAGTAGGAAAAAAATGGtacatt gacgtcaaaaaaggcAATACATTGACTTTAGTCATCCAACTTTTTGCCCA CTTCAATTCAAAATTAGGATAGGCAGGGCAacaagtgggccgtctaaact agatgTAATTGTTTCTTTCCGGTCTTGGTTCTCACGTAACTTGATCAAAA GATGATTATGAATATGATAATGAttgtgaaaatatgaaaatcaaCGCGTG ATAATCATCGGGATGTAGACCGATCGGTGATCTTTTACTTGTGATCTGAT ATTTATTGTCGTAGgacgagaccaatttgattagttgttttatgGGCCCg gccgaccctgaaattccaaaaatcgaaataaaaataaaatttattttgag tagtacatttttattttcattgcttttacAGACTGctaaattttggtagt ttttccaaagttttgagaatttgatGTTCAATTTTCCATTTTATCCATGT Tttcgagctttttgtgtctttttattttctatctcacatttttgtcaaga tgtagtagtttttgctgcctttttaggagattttataatgtgaaattcta cttttatttttattgttttgccgaccgaccgaccctcttttttgggtagc ttggcccgtaaaacaacactttaaattggcctcgcctagTTTTTGAAGTA TCGAGTAGTCCCATaacatgatttttttattgacttATAGGTTCGACATA TCGTTGGTATCATTCAATTGGTTCCTGACTGTTTTTGTTGATCTCTTTCC GATTGAGGTAAGTTTCCGAAGGTGTTATAAGAATATGAGGCTGATCAGGG GAATCAGATGGTTTCTGTGGATTTCTTTCCAGGGTCCTAAGAAAacctgc aaaatatttttgtctgacTCCTTTCAAAAGTTGAGATAACACATTTTGAA ATTCGGTTCTTACACGTCCTATTCGTTTATTGCTAAAgaagtcaaaaact tttaacTAGAATGTATCGACTTTTGGAAAGAGTTGTGCAagaatattttg aggttttgatCAGGACTATTGAAGAAATCTACGGTCAAAATATATCCCAG atcatcaaattttaaattaaatgTCAGATTcaacaaattaatttgaaaat aggaaatatttcaacaaaaaaaagaacCGTCGGGTTAAAATTTATTAACT GTTAaccattaaaggttttgtttttaaataaaagtgatatcgtttgctta ctttactcataaattttaattcacaatctTTTTCACATTTATTTGACACG gaaaagaaaacctttttttgtttatatcagcatacagcacctgaccccga gaatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNCtctgaaacaaatttttatgaagttgaactatcg ttagggctacaatgctaaaaaatgagaaacctacattctcggggtttact acattcttggggtcaggtgctgtaatataacaataggcagacactgtcct gatatgaaatatgtgtctgatatgaaatatgtgtctgatatgaaacggga acacttgtgtaaaaataaaacctttaagctttttttatggaaaaatcATT GAGAACAGGTTAAGAATCAGAGAAAATAGGATAACTTCTAGATGCGATCA TTAAAATGCTTAACGATTTATTGAAATAATTTGTTATTTTCAGTTGACGT TAAGAGTGTGGGATACATTTCTCTTCGAAGGTAGCAAGGTAAGTTTTGTT TTCAGGCCATATTAACTCTCTCGAAACACTCACTGTCGGttacgcaattt tttttccgtaagcaATAGACCTACGtgatggtgattatgtcccttgagac ataaaatgattttttttgaatagaaagtagttttattaaaatccgctggg agttaatcaccatggcaataatttctaaacggggcaagtgatgttcgtaa cgtaatttatgaaaaagtctatcCAAGACCTCCAAAACTTTTTTAGCGCA AAATCTAGCTATCCAAGACCTGATTTAGCTATCTAAGACCTTCCTGTTTT GCCGTGCGGAAGCATTTAGCTATCCAAGACCTGATTTAACGATCAAAGAC CTGTAAGACTTACAAATCTATCATATTTTAGCTATCCAAGACCTTCAACT CAATTTGCGTCGAGAATTCTCTCCAAATCGGCCGTCATACTCGTACTAAA TAAATTTCCTTTGTACACAAAATGTACGAGTAGGTAAAAATCTCGTAATA TCGCGGGAACAAATTTTCCCAGTGCGAGGGTATTACATTGGCGCATTttg tggaactaattttcgcgtttaACACCCACTTTTTGcgaaattctttcata ttcctagaggtttttgaggatttttagtAAAAGTCACATTTCGCGGAACT ATCTTTCgcggtagacacccaaaaacgcgaaaattagttcccttaagggt AGTAAAGTTAGTCTTGTACAGTTTGCTGCAATCTGTCGAAATTTGAACAG CTATTGGCCTTCTTCTATCCTCTTAAGCTATGTtatgaaaaacaacaaac tCGAACCCAGGCCCTTAGCctgctttttttataattttgattgttACATA GACGTGTACCAACGTctatcagaaaaataaaaaaagttatttaagGGGCC CTTGGTACGAGAGTGGGGAAACTCCACACTGAGTAAGGTCAATAATTTTG Acgcagttgacgctctctaatttgatcttcaaggggaattggatttttat cgaataagagagcttatcgaataagggagcgtcgtttatgagagtttgtt gttgacTGGGACTTTAAATTCCATCGAAGAAGGGAGCcaatcgaatagta gaacgtcgaattagagagcgtcaactgtataatttttatttttacgcAGG TTTTATTCCGGTACGCATTGTCCGTCTTCAAACTTTTCGAAGAAGAATTC CTACGCTTTAAAGATCCTGGACCGATGTTCAACTTTTTCCGAAATCTACC CAAAAAGAAATTCAACATTCAAAAGATTTGTTACATAGCTTTCAACACGA TGAACCCCTTTAGTCGTCGTAATGTGGAATCGAAAAGGAAATTCTACAGA CCTATTCTTCAAGTAAGCCTTTGTTAATACAGTTGAATTAAATTTCTAAC ATGATCTTCAAAGGACGAAGAATTTCcttcaaattagagaaagatttgaa ttatatCAAGTATTTTATACTAAATGCTAGCTGAGAGGACTAATATTTTA TTTCGAAATACACAGAGAGATTCGGATAAAGGGATTCTATTTAGAAACAG TTGACTgtagaatatttttttctgcattgatttgttttttgttgtctttt tatcgagtttatgtatttgcacttttgaggacgagAACGGTAAAAGTGTC GTCCTCAGTTAGTCAGGATGTAGTCGAAATAGACGCTAACCGTCTCGTGT GTTATTCCAAATTGCCTCAGTCACTCCACCGCCctcaaaaatgcaaatac ataaacttgctaatATTACGTCGCACGTTTTTCTTaccgacccttatagt gcatttTCATGGCGATGGATGTTTCTAAAAAACAGtcatttgtaaaaaaa tgtattttttcaaCTTCAAAGGCACAACTTGACGAGTTTGAAATTATGCG TGAGGAATACAAGGAGAAACGGGAAGACAGTATTTCTATTCACGATGAAG AACCAATCAGTGACGACGAGAACTAACCATTGTCCAATCAGATGGCGAGA AATAGTATAGTTGTCCAATCAGGATCCAAGGATTGATTTCATAATCCAAT CAGATGGCGAGAAATAGTATAGTTGTCCAATCAGGATCCAAGGATTGATT TCATAATCCAATCAGATGGCGAGAAATTGTTATGGTTGTCCAATCAGGAT CCAAGGATTAATTTCATCATCCAATCAAAATCGCGAGACCACATGAAAAC TGTGATGTCACCATCCAATGAAAACACTAAGAATGATTGATAGCCAATCT GATCAAAGAAAAGGTTTGATTCTTTCAAGTTGGACCAAAATCAAGATATG GCCACTCTTGTTATTTGTTAAAACACTGGAAACTAATGATTGACCAATGA GAAAACCCGATTTAATGTCGCAATTACTGTATAGATTTCTTTCATTAAAA CGGAAGAGCTGATTAAACCTGGATAAATTccactaaaaatattttatggt TTTAGCTAAATTTCAACTGTTATTCTCGCCTGAAATTTTGACTCGTTTTT GAGGTCACTCATTGATCAAAACTAAATGAAATAAATGGATACCAATATTT TTTATGTGAATACAAAATTCagtttagtatttttttttcttaaggtgagg ccaatttaatttgttgttttacgggccaagcgaCCCAagaaagagggtcg gtcgggcggttgaaaataaaaataaaagtagaattttaccTATTAAAATC TCCTCAAAAGGCAGCAAAtctactacatcttgacaaaaatgcgaaataga aaataaaaaggcacaaaaaggtcgaattctagtcgaattcatggataaaa tgaaaaatagaacattaaattctcaaaattttggaaaaacaaactcctat ttcgaaaatttgggagtctgtaaagcaatgaaaataaaaatgtgctacca aaatgaattttatttttatttcgatttttgaaatttcagggttGTTTGGA CCCgcaaaacaactaatcaaaatGGTCTCGCCTAATCATATAATTGTTGA TAGActgtaaatttttaaaagaatttaaagTGTATATAATGCACCCTCGA ACTTCTTCGAGTCACTAAATTGTCATAATTCAATCTCTTATTCGTTTTAA AAAGCAAACTTTAGTCATTAAAGGATAAAAAAGGGAGCCTCGTTACCTAC AGCAatgttttaaaacaatttttggcTTCCATTTCcctatttttgagagg gaggtcTTGTAATAGACAACACAAGGTATTCTGTCATCCATCGTTAAGtt acgtaaataaagcctgggatacacaggGACCAGGATTCGTGCACATATAT CTTGATTAAtgatattcatgacgtaatgttttctacggaaatactccggt ttttgccagtagtggcaaatttaactTTTATCTAGTTTAAATATAATATT ATGAATATTATTGAAACATTattgaatatcatgaataagatCTTAATTTA GCATTTGGCAATTTCTTTCCAGGGATATTTTTACTCATTCGGGATAAGAG TTAAAAACTTACCTTCATATAACGAATTAATTAAGCTGAATTCAGGGTAt agatttttttacttttgatttatattttttgaaattaatttaaattataA GCTTCGATTTTTGTTAATTATATAAATGATAACTGGGAAATTCTATTGTC TTTCTTGTAAATATTCAGAggatttttttatatgtttttttttttgcaat ttagtttttcttattctttttatATACCAGGataacaataatttttttaa tttattacgATTCTACAGATTTTATTTCCTAAATTTATTGCTaatatttt ttcagttttaaatcAAGATAATTCTTTGACAATAAAATATAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045740XLOC_045740Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073662-exon-scaffold_97-1491911889:462563..462742TCONS_00073662-exon-scaffold_97-1491911889:462563..462742Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:462563..462742TCONS_00073662-exon-scaffold_97-1510915933:462563..462742Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:462563..462742TCONS_00073662-exon-scaffold_97-1575043694:462563..462742Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:463136..463238TCONS_00073662-exon-scaffold_97-1491911889:463136..463238Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:463136..463238TCONS_00073662-exon-scaffold_97-1510915933:463136..463238Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:463136..463238TCONS_00073662-exon-scaffold_97-1575043694:463136..463238Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:463784..463864TCONS_00073662-exon-scaffold_97-1491911889:463784..463864Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:463784..463864TCONS_00073662-exon-scaffold_97-1510915933:463784..463864Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:463784..463864TCONS_00073662-exon-scaffold_97-1575043694:463784..463864Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:465482..465718TCONS_00073662-exon-scaffold_97-1491911889:465482..465718Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:465482..465718TCONS_00073662-exon-scaffold_97-1510915933:465482..465718Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:465482..465718TCONS_00073662-exon-scaffold_97-1575043694:465482..465718Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:466073..466197TCONS_00073662-exon-scaffold_97-1491911889:466073..466197Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:466073..466197TCONS_00073662-exon-scaffold_97-1510915933:466073..466197Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:466073..466197TCONS_00073662-exon-scaffold_97-1575043694:466073..466197Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:466708..466786TCONS_00073662-exon-scaffold_97-1491911889:466708..466786Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:466708..466786TCONS_00073662-exon-scaffold_97-1510915933:466708..466786Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:466708..466786TCONS_00073662-exon-scaffold_97-1575043694:466708..466786Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:467087..467151TCONS_00073662-exon-scaffold_97-1491911889:467087..467151Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:467087..467151TCONS_00073662-exon-scaffold_97-1510915933:467087..467151Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:467087..467151TCONS_00073662-exon-scaffold_97-1575043694:467087..467151Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:467953..468019TCONS_00073662-exon-scaffold_97-1491911889:467953..468019Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:467953..468019TCONS_00073662-exon-scaffold_97-1510915933:467953..468019Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:467953..468019TCONS_00073662-exon-scaffold_97-1575043694:467953..468019Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:470156..470200TCONS_00073662-exon-scaffold_97-1491911889:470156..470200Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:470156..470200TCONS_00073662-exon-scaffold_97-1510915933:470156..470200Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:470156..470200TCONS_00073662-exon-scaffold_97-1575043694:470156..470200Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:471362..471574TCONS_00073662-exon-scaffold_97-1491911889:471362..471574Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:471362..471574TCONS_00073662-exon-scaffold_97-1510915933:471362..471574Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:471362..471574TCONS_00073662-exon-scaffold_97-1575043694:471362..471574Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:472084..474055TCONS_00073662-exon-scaffold_97-1491911889:472084..474055Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:472084..474055TCONS_00073662-exon-scaffold_97-1510915933:472084..474055Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:472084..474055TCONS_00073662-exon-scaffold_97-1575043694:472084..474055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:462563..474055 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0915482 0.0916411 0 0.456728 0 1.77825 1.24799 3.08507 3.20174 0.708384 1.31654 1.32474 0.664495 1.38472 1.50948 1.3975 0.916943 2.18451 2.48378 1.42054 1.37404 0.174135 0.5269 0.279439 0 1.31581 0.957193 0.209861 0.0815331
Blast
BLAST of TCONS_00073662 vs. Swiss-Prot (Human)
Match: TBD2B (TBC1 domain family member 2B OS=Homo sapiens GN=TBC1D2B PE=1 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 2.042e-83
Identity = 155/333 (46.55%), Postives = 222/333 (66.67%), Query Frame = 2
Query:  296 EVSHGVKWENYLVAQGTAPLQKTEELKALVRSGIPHEFRARVWGDLVRLRSDHERTIAGQGYYANLLKEKKGAYSPSAKQIELDLLRTLPNNKYYDTLESEGISKLRRILTAYSWHNPAVGYCQGLNRLGAIALLYLDEETAFWCLVAITEHLMPIDYYSRTLLGAQIDQKVFRDLLDEKCPKLSAHLVSLQFDISLVSFNWFLTVFVDLFPIELTLRVWDTFLFEGSKVLFRYALSVXXXXXXXXXXXXDPGPMFNFFRNLPKKKFNIQKICYIAFNTMNPFSRRNVESKRKFYRPILQAQLDEFEIMREEYKEKREDSISIHDEEPISDDE 1294
            EVS GVKWENY  +     +  + ELK L+R+GIPHE R++VW   V   +   +     G++  LL++     +P++KQIELDLLRTLPNNK+Y    SEGI KLR +L A+SW NP +GYCQGLNRL A+ALLYL++E AFWCLV I E  MP DYY++TLLG+Q+DQ+VFRDL+ EK P+L  H    + D +L++FNWFL VFVD    ++  ++WD+FL+EG KV+FR+AL++FK  EEE L+ +D   +F + R   +   + +K+  I+F  +NPF  R + ++R ++   ++ +L E E +RE++   RE   S    E +SD+E
Sbjct:  630 EVSTGVKWENYFASTVNREMMCSPELKNLIRAGIPHEHRSKVWKWCVDRHTRKFKDNTEPGHFQTLLQKALEKQNPASKQIELDLLRTLPNNKHYSCPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAVALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLISISFGDLNPFPLRQIRNRRAYHLEKVRLELTELEAIREDF--LRERDTSPDKGELVSDEE 960          
The following BLAST results are available for this feature:
BLAST of TCONS_00073662 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBD2B2.042e-8346.55TBC1 domain family member 2B OS=Homo sapiens GN=TB... [more]
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