TCONS_00073637 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073637
Unique NameTCONS_00073637
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length469

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073637 ID=TCONS_00073637|Name=TCONS_00073637|organism=Clytia hemisphaerica|type=transcript|length=469bp
tttgaccctgtcagatacacatagtaaaaattagtaaatttgggaccctg
tcagatatcttcagagcctaaaaagggaccctgatcagcggcacgtcccc
gtacccaattttccCTAAGTGAATGCTAGCAAATCTGAATTATGTTCTCA
ACGGTatataatttgttttatttgagCATTGTTGGAAATTGGCAAGCAAA
ACAAACTTTAATGCACACTTAAAGTGAAAGGACTTTAGATGAgtgtaggc
tacgtcatatcttccttctattgtgtagactaagaTGAGTGTGGATAAAG
CTTTAACATTCATGATGTAAACAATCCCTTACTTTCGAACGCGCGTCACC
ATAATCAAAACCTTTTAATTCGATTGGTCGATTTCATGCGAcattctttt
tatataaatgcATTGCGAAATCGACATGTAATCAACAACACGTTTTTATA
ATATTCCATTTTCAGAGAA
Run BLAST on NCBI

transcript from alignment at scaffold_96:120125..120593

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073637 ID=TCONS_00073637|Name=TCONS_00073637|organism=Clytia hemisphaerica|type=transcript|length=469bp|location=Sequence derived from alignment at scaffold_96:120125..120593 (Clytia hemisphaerica)
TTCTCTGAAAATGGAATATTATAAAAACGTGTTGTTGATTACATGTCGAT
TTCGCAATgcatttatataaaaagaatgTCGCATGAAATCGACCAATCGA
ATTAAAAGGTTTTGATTATGGTGACGCGCGTTCGAAAGTAAGGGATTGTT
TACATCATGAATGTTAAAGCTTTATCCACACTCAtcttagtctacacaat
agaaggaagatatgacgtagcctacacTCATCTAAAGTCCTTTCACTTTA
AGTGTGCATTAAAGTTTGTTTTGCTTGCCAATTTCCAACAATGctcaaat
aaaacaaattatatACCGTTGAGAACATAATTCAGATTTGCTAGCATTCA
CTTAGggaaaattgggtacggggacgtgccgctgatcagggtcccttttt
aggctctgaagatatctgacagggtcccaaatttactaatttttactatg
tgtatctgacagggtcaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045727XLOC_045727Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073637-exon-scaffold_96-1491911889:120125..120593TCONS_00073637-exon-scaffold_96-1491911889:120125..120593Clytia hemisphaericaexon
TCONS_00073637-exon-scaffold_96-1510915933:120125..120593TCONS_00073637-exon-scaffold_96-1510915933:120125..120593Clytia hemisphaericaexon
TCONS_00073637-exon-scaffold_96-1575043694:120125..120593TCONS_00073637-exon-scaffold_96-1575043694:120125..120593Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_96supercontigscaffold_96:120125..120593 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.46432	0.890668	1.4246	2.16929	0.736057	0.145411	0	0.328474	0.494043	0.180334	0	0.24764	0.15745	0	0.169169	0.201058	0.469112	0.317224	0.321431	0.744859	0	0.250433	0	0.165342	0.170845	0.132191	0.748442	0.462031	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073637 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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