TCONS_00073632 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073632
Unique NameTCONS_00073632
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length194

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073632 ID=TCONS_00073632|Name=TCONS_00073632|organism=Clytia hemisphaerica|type=transcript|length=194bp
TTGACCTTGAAATACGCGACAACAATGACCACGTTCCTTTATGGATGGCT
ATTCTTGCCAGCGGAAACAAAATCGAAGAAGAAGCCTCTGAGAAAACAGG
ATTCGCTTCAAGGCTAGTCGACCGTGGAAGTAGCGCTGATGCATTCAATC
ACTTAACAGGTGATTCCTTGCTCCATCAAGCAGCAGCGTCAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_96:131694..132612-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073632 ID=TCONS_00073632|Name=TCONS_00073632|organism=Clytia hemisphaerica|type=transcript|length=919bp|location=Sequence derived from alignment at scaffold_96:131694..132612- (Clytia hemisphaerica)
TTGACCTTGAAATACGCGACAACAATGACCACGTTCCTTTATGGATGGCT
ATTCTTGCCAGCGGAAACAAAATCGAAGAAGAAGCCTCTGAGAAAACAGG
ATTCGCTTCAAGGCTAGTCGACCGTGGAAGTAGCGCTGATGCATTCAATC
ACTTAACAGGTGAAATCTCTTTTTATTAGCCCCTTTCTACACATCGGTTT
TTATTGCTATCGAGAGGTGTTAAGTTGATTTAAATCCTATTCCGAAAATA
TTGATAGTCCGCACATTGTGAAACATTACCGAGTTTATGTATCGGAGGAT
ATCGAGGGCGACGGTAAGTGAAATAGTACAAAACAAAGTCGAAAGTGTTG
ATGAACGACTCTATATCACCTTTGCTCACCTAAACTGACGACGGTATCTT
GGTGTTTTTACCGTCATCGAGCAAAGTAGACGGCGATTTCGGCCCCATGT
CAGCTTTGCTTTATACCGCCCCCTCGATTTTCTCGAATACATAAACTCGC
TATTGCTCTTGAAGGAGAGAAGATATAATTAAAGGTAATGTCGCCTTGAA
AAGATAATCTTAAGCGGAAGATTTGAACCTTCCAAATCTTTCAAACATTT
TGAAAATGAAGATGAAAAATGAATATGAAAAAACGGAGATTTTTTCTCCA
CCAAAAATTTGAATTTGCACTTTTCTGAAATCTTTAGCATCAAGAACCAT
TTTCACGTCTTCGGTAAGACTCGACCGACGATTGAACCCAGGACGCTCGC
CGTAGCCTTTATGCTACGACTGTCACAAATAAACAAAAATGTTAACCACC
AAATCATCTTTCATCTTTCATGTTTTAGGGGATTCCTTGCTCCATCAAGC
AGTAAATCATCTTTCTACATCTTTCATGTTTTAGGTGATTCCTTGCTCCA
TCAAGCAGCAGCGTCAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045722XLOC_045722Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073632-exon-scaffold_96-1575043694:132454..132612TCONS_00073632-exon-scaffold_96-1575043694:132454..132612Clytia hemisphaericaexon
TCONS_00073632-exon-scaffold_96-1575043694:131694..131728TCONS_00073632-exon-scaffold_96-1575043694:131694..131728Clytia hemisphaericaexon
TCONS_00073632-exon-scaffold_96-1510915933:132454..132612TCONS_00073632-exon-scaffold_96-1510915933:132454..132612Clytia hemisphaericaexon
TCONS_00073632-exon-scaffold_96-1510915933:131694..131728TCONS_00073632-exon-scaffold_96-1510915933:131694..131728Clytia hemisphaericaexon
TCONS_00073632-exon-scaffold_96-1491911889:132454..132612TCONS_00073632-exon-scaffold_96-1491911889:132454..132612Clytia hemisphaericaexon
TCONS_00073632-exon-scaffold_96-1491911889:131694..131728TCONS_00073632-exon-scaffold_96-1491911889:131694..131728Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_96supercontigscaffold_96:131694..132612 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073632 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
TTGACCTTGAAATACGCGACAACAATGACCACGTTCCTTTATGGATGGCTATTCTTGCCAGCGGAAACAAAATCGAAGAAGAAGCCTCTGAGAAAACAGGATTCGCTTCAAGGCTAGTCGACCGTGGAAGTAGCGCTGATGCATTCAATCACTTAACAGGTGATTCCTTGCTCCATCAAGCAGCAGCGTCAAAC20406080100120140160180Sequence
Match NameE-valueIdentityDescription
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