TCONS_00073611 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073611
Unique NameTCONS_00073611
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073611 ID=TCONS_00073611|Name=TCONS_00073611|organism=Clytia hemisphaerica|type=transcript|length=124bp
ATTCCGAAGAAGTTGGAGTGGCTGACAAATCCTTTGAAGGGGTAGCAGGT
GGAGTTTTTGAAGGAGTGACATTCAGTAACAATGACCTTTTAGTGGCTTT
AGTAGGAGTGTCAAATTCAAGAGT
Run BLAST on NCBI

transcript from alignment at scaffold_95:219128..219251

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073611 ID=TCONS_00073611|Name=TCONS_00073611|organism=Clytia hemisphaerica|type=transcript|length=124bp|location=Sequence derived from alignment at scaffold_95:219128..219251 (Clytia hemisphaerica)
ACTCTTGAATTTGACACTCCTACTAAAGCCACTAAAAGGTCATTGTTACT
GAATGTCACTCCTTCAAAAACTCCACCTGCTACCCCTTCAAAGGATTTGT
CAGCCACTCCAACTTCTTCGGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045711XLOC_045711Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073611-exon-scaffold_95-1491911889:219128..219251TCONS_00073611-exon-scaffold_95-1491911889:219128..219251Clytia hemisphaericaexon
TCONS_00073611-exon-scaffold_95-1510915933:219128..219251TCONS_00073611-exon-scaffold_95-1510915933:219128..219251Clytia hemisphaericaexon
TCONS_00073611-exon-scaffold_95-1575043694:219128..219251TCONS_00073611-exon-scaffold_95-1575043694:219128..219251Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_95supercontigscaffold_95:219128..219251 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073611 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top