TCONS_00073599 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073599
Unique NameTCONS_00073599
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length362

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073599 ID=TCONS_00073599|Name=TCONS_00073599|organism=Clytia hemisphaerica|type=transcript|length=362bp
CGGGTCTCTGCAAATGATTGCCAGAGTTAATTGAATCGATGGTAGCAATA
ACacaaatccaaataacaaactTTGATGAAGCGCCATTGTAGATATATTT
AGCCACGGCCAAAACAAGATGAATGGTTTTTAAAACGTTAAAGATTTGTA
AAAGCCGCTTCGCGAATCAAATTGAACCTCTCAATTATAACTCTTTAGAA
TTTATTCTTAAAATCCAGCGTTAGTACTTCAGAAGGTGTTTTGCATCTAT
CCAAGTAATATATTAAAGTAAtacaggcacgacggaagctttttatatct
ggtacggcgaatgaggaaatttaagcgattttatagcgatttgaccgacg
aagaggaaaact
Run BLAST on NCBI

transcript from alignment at scaffold_95:78318..78679

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073599 ID=TCONS_00073599|Name=TCONS_00073599|organism=Clytia hemisphaerica|type=transcript|length=362bp|location=Sequence derived from alignment at scaffold_95:78318..78679 (Clytia hemisphaerica)
agttttcctcttcgtcggtcaaatcgctataaaatcgcttaaatttcctc attcgccgtaccagatataaaaagcttccgtcgtgcctgtaTTACTTTAA TATATTACTTGGATAGATGCAAAACACCTTCTGAAGTACTAACGCTGGAT TTTAAGAATAAATTCTAAAGAGTTATAATTGAGAGGTTCAATTTGATTCG CGAAGCGGCTTTTACAAATCTTTAACGTTTTAAAAACCATTCATCTTGTT TTGGCCGTGGCTAAATATATCTACAATGGCGCTTCATCAAagtttgttat ttggatttgtGTTATTGCTACCATCGATTCAATTAACTCTGGCAATCATT TGCAGAGACCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045699XLOC_045699Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073599-exon-scaffold_95-1491911889:78318..78679TCONS_00073599-exon-scaffold_95-1491911889:78318..78679Clytia hemisphaericaexon
TCONS_00073599-exon-scaffold_95-1510915933:78318..78679TCONS_00073599-exon-scaffold_95-1510915933:78318..78679Clytia hemisphaericaexon
TCONS_00073599-exon-scaffold_95-1575043694:78318..78679TCONS_00073599-exon-scaffold_95-1575043694:78318..78679Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_95supercontigscaffold_95:78318..78679 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.84 34.5247 26.4501 26.1502 87.7005 44.1648 399.505 494.127 60.9776 122.46 16.4691 17.4687 1.63545 0.537213 2.88305 4.23023 12.6778 10.7512 23.0396 32.6092 3.6619 3.11339 19.5083 17.0864 0 0.89056 28.2307 21.909 22.135 21.4951
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073599 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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