TCONS_00073594 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073594
Unique NameTCONS_00073594
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073594 ID=TCONS_00073594|Name=TCONS_00073594|organism=Clytia hemisphaerica|type=transcript|length=166bp
TCGAAAGTTCGCCCTGCTCCTTAAACTTAGAAGTTCGATCAAAAGgaaac
GTTTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCACGAAACTCA
ACCAAATGGAGATAGGCCAGGTGGCTCTCAATCAACAACAAAAGTTGAAT
TTCAGGTTAATGAGGT
Run BLAST on NCBI

transcript from alignment at scaffold_95:183235..183526-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073594 ID=TCONS_00073594|Name=TCONS_00073594|organism=Clytia hemisphaerica|type=transcript|length=292bp|location=Sequence derived from alignment at scaffold_95:183235..183526- (Clytia hemisphaerica)
TCGAAAGTTCGCCCTGCTCCTTAAACTTAGAAGTTCGATCAAAAGGTATT
ACATACCATTTACGTAACATTCTTTTATAATCGTGTTCAATTGCAACAGT
GTGCTAGTAAAATATGCTCATTTCCATTTATGACCGAAATATTTTCTTAC
ATTTTAATTTTAATTTTTCAGGAAACGTTTTGCTAACAAAAGACGAATCT
AACAAGGCCATAATCCACGAAACTCAACCAAATGGAGATAGGCCAGGTGG
CTCTCAATCAACAACAAAAGTTGAATTTCAGGTTAATGAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045694XLOC_045694Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073594-exon-scaffold_95-1575043694:183482..183526TCONS_00073594-exon-scaffold_95-1575043694:183482..183526Clytia hemisphaericaexon
TCONS_00073594-exon-scaffold_95-1575043694:183235..183355TCONS_00073594-exon-scaffold_95-1575043694:183235..183355Clytia hemisphaericaexon
TCONS_00073594-exon-scaffold_95-1510915933:183482..183526TCONS_00073594-exon-scaffold_95-1510915933:183482..183526Clytia hemisphaericaexon
TCONS_00073594-exon-scaffold_95-1510915933:183235..183355TCONS_00073594-exon-scaffold_95-1510915933:183235..183355Clytia hemisphaericaexon
TCONS_00073594-exon-scaffold_95-1491911889:183482..183526TCONS_00073594-exon-scaffold_95-1491911889:183482..183526Clytia hemisphaericaexon
TCONS_00073594-exon-scaffold_95-1491911889:183235..183355TCONS_00073594-exon-scaffold_95-1491911889:183235..183355Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_95supercontigscaffold_95:183235..183526 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073594 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
TCGAAAGTTCGCCCTGCTCCTTAAACTTAGAAGTTCGATCAAAAGgaaacGTTTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCACGAAACTCAACCAAATGGAGATAGGCCAGGTGGCTCTCAATCAACAACAAAAGTTGAATTTCAGGTTAATGAGGT20406080100120140160Sequence
Match NameE-valueIdentityDescription
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