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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073582 ID=TCONS_00073582|Name=TCONS_00073582|organism=Clytia hemisphaerica|type=transcript|length=1447bp
gagAAATCTCTAATTTGTTTCTTGCGAAAATTGATCCGATTAATTGACTA
ATGTGtatatttttagttttagatTTGGAAGCACAAATGGAGCAAAACAG
TAACTattccaccaccaccaccactaTCTTGCCATTACAGACGACAAAAG
AAGAACCAGACCCGCTTCAAATGGCCAAAGATTTTGAACAGCATTTTAAT
TGTAAAGTGTTCCCTATCATTTTTGGAATAGGATGTTTTTGGAATCTCTT
GATCATTGCATACTTCGTGAAAATCAATCGTGGGAAAGGTTTAAGGAATA
TGAGTTCATATCATTTTTTGATCATCATTTTAGCATTTGTTGATTTATTG
GTAACCATGGGTATCACTGTTCGCTTTTGTTTCCATCCAATAGAAATTCT
CGGTGAAGAAGCAGGACTGGTGGCTTGCATTTTAGTGCATACATTTTCAG
CTGAAGTCGGCCCTATGATATCATGTTGGGTTCTTATTCTAATTTCATAT
GGTCGATATCGATCTATTGTGTATCCTTTGAAAGCGAGAATGACGAAACG
AAAAAGCTGTTTGCTCAGCATAATTATTTTTATGGTCATTTGTTCCATTA
ACATTTATACTTTAATGAAAACGAAGATAATTCATGAACCCGGTGACCGC
TCAAAGTGTGATTTTGGTGTCAGTGGTGTCTACATGGCGGTACAGTTAAT
TGTCAATTTCATTATCGATAGTCTCATCCCTTTAATAGTCATGGcgtatt
tttatttcaaaatgaagaagaatatGAAAAAAGAGGTGACAACTAATAAA
ACGCGACATAATGAAAGAGCAAGTACATTTTCTTTGAGTGACCAAAGCCA
ACGGAGGAATCGAAGAgcattgaaaacaataaaaggACTTCTCATTTTGT
TCATCATTACAGTTTTTTGTATGCGAATTCTTTTCATGATCAACTTGCTG
GCGATCCAACCAATAGCAACAGGGCATGAGAACATTACCGTCGTTACATA
TTCTACCATTGCATTTCCGGTTATTCTTACACTTTTCTATTCAAATaaca
ttttaaacatttttgtttACGCTAAAATGATTCCTGATTTCAGGAAATTT
GTGTTGACAGTTCTTACGTTGGGAATGTGTGGACGAAAAAAGATGACTTC
TAAACAAACTTTATCGGCTTATACCGTTTCTAAAAATTCAGTAATGTAAG
CAGGAGCAATGGAGTattgttaaaggttttatttttatatgagtgttccc
gtttcctataagacacatatttcatatcaggaaagtcgtgtctgtctatt
gatatattgtgctgatataagcaaaaaatgttttttttcctctttctgac
cagtcttgctccacatctgtgtcaatccaatgtgaaaaagtttgtgaatt
ataattgatgagtaagcaaacgatacacgctttttttttaaataaga Run BLAST on NCBI protein sequence of TCONS_00073582-protein >TCONS_00073582-protein ID=TCONS_00073582-protein|Name=TCONS_00073582-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
MCIFLVLDLEAQMEQNSNYSTTTTTILPLQTTKEEPDPLQMAKDFEQHFN
CKVFPIIFGIGCFWNLLIIAYFVKINRGKGLRNMSSYHFLIIILAFVDLL
VTMGITVRFCFHPIEILGEEAGLVACILVHTFSAEVGPMISCWVLILISY
GRYRSIVYPLKARMTKRKSCLLSIIIFMVICSINIYTLMKTKIIHEPGDR
SKCDFGVSGVYMAVQLIVNFIIDSLIPLIVMAYFYFKMKKNMKKEVTTNK
TRHNERASTFSLSDQSQRRNRRALKTIKGLLILFIITVFCMRILFMINLL
AIQPIATGHENITVVTYSTIAFPVILTLFYSNNILNIFVYAKMIPDFRKF
VLTVLTLGMCGRKKMTSKQTLSAYTVSKNSVM Run BLAST on NCBI transcript from alignment at scaffold_94:350363..351809 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073582 ID=TCONS_00073582|Name=TCONS_00073582|organism=Clytia hemisphaerica|type=transcript|length=1447bp|location=Sequence derived from alignment at scaffold_94:350363..351809 (Clytia hemisphaerica)
tcttatttaaaaaaaaagcgtgtatcgtttgcttactcatcaattataat
tcacaaactttttcacattggattgacacagatgtggagcaagactggtc
agaaagaggaaaaaaaacattttttgcttatatcagcacaatatatcaat
agacagacacgactttcctgatatgaaatatgtgtcttataggaaacggg
aacactcatataaaaataaaacctttaacaatACTCCATTGCTCCTGCTT
ACATTACTGAATTTTTAGAAACGGTATAAGCCGATAAAGTTTGTTTAGAA
GTCATCTTTTTTCGTCCACACATTCCCAACGTAAGAACTGTCAACACAAA
TTTCCTGAAATCAGGAATCATTTTAGCGTaaacaaaaatgtttaaaatgt
tATTTGAATAGAAAAGTGTAAGAATAACCGGAAATGCAATGGTAGAATAT
GTAACGACGGTAATGTTCTCATGCCCTGTTGCTATTGGTTGGATCGCCAG
CAAGTTGATCATGAAAAGAATTCGCATACAAAAAACTGTAATGATGAACA
AAATGAGAAGTccttttattgttttcaatgcTCTTCGATTCCTCCGTTGG
CTTTGGTCACTCAAAGAAAATGTACTTGCTCTTTCATTATGTCGCGTTTT
ATTAGTTGTCACCTCTTTTTTCatattcttcttcattttgaaataaaaat
acgCCATGACTATTAAAGGGATGAGACTATCGATAATGAAATTGACAATT
AACTGTACCGCCATGTAGACACCACTGACACCAAAATCACACTTTGAGCG
GTCACCGGGTTCATGAATTATCTTCGTTTTCATTAAAGTATAAATGTTAA
TGGAACAAATGACCATAAAAATAATTATGCTGAGCAAACAGCTTTTTCGT
TTCGTCATTCTCGCTTTCAAAGGATACACAATAGATCGATATCGACCATA
TGAAATTAGAATAAGAACCCAACATGATATCATAGGGCCGACTTCAGCTG
AAAATGTATGCACTAAAATGCAAGCCACCAGTCCTGCTTCTTCACCGAGA
ATTTCTATTGGATGGAAACAAAAGCGAACAGTGATACCCATGGTTACCAA
TAAATCAACAAATGCTAAAATGATGATCAAAAAATGATATGAACTCATAT
TCCTTAAACCTTTCCCACGATTGATTTTCACGAAGTATGCAATGATCAAG
AGATTCCAAAAACATCCTATTCCAAAAATGATAGGGAACACTTTACAATT
AAAATGCTGTTCAAAATCTTTGGCCATTTGAAGCGGGTCTGGTTCTTCTT
TTGTCGTCTGTAATGGCAAGAtagtggtggtggtggtggaatAGTTACTG
TTTTGCTCCATTTGTGCTTCCAAatctaaaactaaaaatataCACATTAG
TCAATTAATCGGATCAATTTTCGCAAGAAACAAATTAGAGATTTctc Coding sequence (CDS) from alignment at scaffold_94:350363..351809 >TCONS_00073582 ID=TCONS_00073582|Name=TCONS_00073582|organism=Clytia hemisphaerica|type=CDS|length=1149bp|location=Sequence derived from alignment at scaffold_94:350363..351809 (Clytia hemisphaerica)
TTACATTACTGAATTTTTAGAAACGGTATAAGCCGATAAAGTTTGTTTAG
AAGTCATCTTTTTTCGTCCACACATTCCCAACGTAAGAACTGTCAACACA
AATTTCCTGAAATCAGGAATCATTTTAGCGTaaacaaaaatgtttaaaat
gttATTTGAATAGAAAAGTGTAAGAATAACCGGAAATGCAATGGTAGAAT
ATGTAACGACGGTAATGTTCTCATGCCCTGTTGCTATTGGTTGGATCGCC
AGCAAGTTGATCATGAAAAGAATTCGCATACAAAAAACTGTAATGATGAA
CAAAATGAGAAGTccttttattgttttcaatgcTCTTCGATTCCTCCGTT
GGCTTTGGTCACTCAAAGAAAATGTACTTGCTCTTTCATTATGTCGCGTT
TTATTAGTTGTCACCTCTTTTTTCatattcttcttcattttgaaataaaa
atacgCCATGACTATTAAAGGGATGAGACTATCGATAATGAAATTGACAA
TTAACTGTACCGCCATGTAGACACCACTGACACCAAAATCACACTTTGAG
CGGTCACCGGGTTCATGAATTATCTTCGTTTTCATTAAAGTATAAATGTT
AATGGAACAAATGACCATAAAAATAATTATGCTGAGCAAACAGCTTTTTC
GTTTCGTCATTCTCGCTTTCAAAGGATACACAATAGATCGATATCGACCA
TATGAAATTAGAATAAGAACCCAACATGATATCATAGGGCCGACTTCAGC
TGAAAATGTATGCACTAAAATGCAAGCCACCAGTCCTGCTTCTTCACCGA
GAATTTCTATTGGATGGAAACAAAAGCGAACAGTGATACCCATGGTTACC
AATAAATCAACAAATGCTAAAATGATGATCAAAAAATGATATGAACTCAT
ATTCCTTAAACCTTTCCCACGATTGATTTTCACGAAGTATGCAATGATCA
AGAGATTCCAAAAACATCCTATTCCAAAAATGATAGGGAACACTTTACAA
TTAAAATGCTGTTCAAAATCTTTGGCCATTTGAAGCGGGTCTGGTTCTTC
TTTTGTCGTCTGTAATGGCAAGAtagtggtggtggtggtggaatAGTTAC
TGTTTTGCTCCATTTGTGCTTCCAAatctaaaactaaaaatataCACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073582-exon-scaffold_94-1491911889:350363..351809 | TCONS_00073582-exon-scaffold_94-1491911889:350363..351809 | Clytia hemisphaerica | exon |
| TCONS_00073582-exon-scaffold_94-1510915933:350363..351809 | TCONS_00073582-exon-scaffold_94-1510915933:350363..351809 | Clytia hemisphaerica | exon |
| TCONS_00073582-exon-scaffold_94-1575043694:350363..351809 | TCONS_00073582-exon-scaffold_94-1575043694:350363..351809 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_94 | supercontig | scaffold_94:350363..351809 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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