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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073581 ID=TCONS_00073581|Name=TCONS_00073581|organism=Clytia hemisphaerica|type=transcript|length=1091bp
CTGAAATTCGAATTTGAACTTTATCttatatgaataaaaataaataaatt
tgtttCTCTACAACTCTCAAAAATCCCTGGAAGACATTCGACAAAAAAAA
CTACAActtctaaaaaataaataaatagccCCTCATCTCAAGCCAAAAAC
AACATATACAGAAAAATTACAatccaaaaaatcgaatttcacTATCATTA
GAATAATTTAAAACAACACTGAAAATTAAATCAAACTTAAAGCCGGTCta
cactttcgcgcgacatgagcgaaagctttttgacgtttttgtcaGGTCGG
TTAAAAATTGAACCAATTctattggtcgaaattgacgtaacagaactttt
tttttgttcacgcgaaacttttttatgacgaaATCTTTCTTCAggaaaaa
aaggtttaaaaaaactGTCACCCATtttgcgcgaaagtggagaccggcct
ttataaTCATTTTCCCGAAATACACCTGTCTCTCACGATTTTCGTACAAT
GAAAGCCTTGGTTCAATATTAGGATTCGATAATGTCAAATATCAGAAGCT
ATTAACTCCATATGCTCAAAAATGACGACAAATAACGTCATTCGGCCCTA
GCAGGTATATCGAATCAAACAATAACAatgagaattttaaaatcaacaaT
CTCAGCCAGACTGGTTTCGATATTTTAGTCAAGGCTTATAGCATTGTGTT
CAAAAGCCCTACCCTTGTAAAATTGAACGGAGTTAAATCGCTAAATATGT
AAGGGAAGCCATCATTAAGTAAGAATatacaacacccctgtctcgcagcc
ccggtggaactttttcctcagtggggataaaaattcttatcgaaatctta
atggggatagaaattttattgttccgaggttaaaaaatccagtggggatg
gttttggaatgcaatttttaaacattggatctcgaatggggatgaaatca
aattcaaattccTAGTGGGgccgaaatttttgccaaattttccagtgggg
ctggggtcccggcgggtctgtgacacaggggtgttagaCAGCTCAAAAGC
GACTTTAAATTTTCATGGATGTAATTTAAGTGAATTGCAAA Run BLAST on NCBI transcript from alignment at scaffold_94:348803..349893 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073581 ID=TCONS_00073581|Name=TCONS_00073581|organism=Clytia hemisphaerica|type=transcript|length=1091bp|location=Sequence derived from alignment at scaffold_94:348803..349893 (Clytia hemisphaerica)
TTTGCAATTCACTTAAATTACATCCATGAAAATTTAAAGTCGCTTTTGAG
CTGtctaacacccctgtgtcacagacccgccgggaccccagccccactgg
aaaatttggcaaaaatttcggcCCCACTAggaatttgaatttgatttcat
ccccattcgagatccaatgtttaaaaattgcattccaaaaccatccccac
tggattttttaacctcggaacaataaaatttctatccccattaagatttc
gataagaatttttatccccactgaggaaaaagttccaccggggctgcgag
acaggggtgttgtatATTCTTACTTAATGATGGCTTCCCTTACATATTTA
GCGATTTAACTCCGTTCAATTTTACAAGGGTAGGGCTTTTGAACACAATG
CTATAAGCCTTGACTAAAATATCGAAACCAGTCTGGCTGAGAttgttgat
tttaaaattctcatTGTTATTGTTTGATTCGATATACCTGCTAGGGCCGA
ATGACGTTATTTGTCGTCATTTTTGAGCATATGGAGTTAATAGCTTCTGA
TATTTGACATTATCGAATCCTAATATTGAACCAAGGCTTTCATTGTACGA
AAATCGTGAGAGACAGGTGTATTTCGGGAAAATGAttataaaggccggtc
tccactttcgcgcaaaATGGGTGACagtttttttaaacctttttttccTG
AAGAAAGATttcgtcataaaaaagtttcgcgtgaacaaaaaaaaagttct
gttacgtcaatttcgaccaatagAATTGGTTCAATTTTTAACCGACCtga
caaaaacgtcaaaaagctttcgctcatgtcgcgcgaaagtgtaGACCGGC
TTTAAGTTTGATTTAATTTTCAGTGTTGTTTTAAATTATTCTAATGATAg
tgaaattcgattttttggatTGTAATTTTTCTGTATATGTTGTTTTTGGC
TTGAGATGAGGggctatttatttattttttagaagTTGTAGTTTTTTTTG
TCGAATGTCTTCCAGGGATTTTTGAGAGTTGTAGAGaaacaaatttattt
atttttattcatataaGATAAAGTTCAAATTCGAATTTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073581-exon-scaffold_94-1491911889:348803..349893 | TCONS_00073581-exon-scaffold_94-1491911889:348803..349893 | Clytia hemisphaerica | exon |
| TCONS_00073581-exon-scaffold_94-1510915933:348803..349893 | TCONS_00073581-exon-scaffold_94-1510915933:348803..349893 | Clytia hemisphaerica | exon |
| TCONS_00073581-exon-scaffold_94-1575043694:348803..349893 | TCONS_00073581-exon-scaffold_94-1575043694:348803..349893 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_94 | supercontig | scaffold_94:348803..349893 . |
Blast
The following BLAST results are available for this feature:
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