Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073577 ID=TCONS_00073577|Name=TCONS_00073577|organism=Clytia hemisphaerica|type=transcript|length=1080bp
TTTCGAGAAAGGATAAAAGGAGAATTAAGCGATCTATCTAAAAACAGTAC
GTTTTCTTGGATTTTAACGTTCGAACGAAGCAGTTTGCAGTTTTGTCTTC
TTCATCTTTACAAGGCATTCAAAATGGACGAAGTGTTTATCTCAAACATG
TACCGACTTACATGATGCGCAGAGAAATATTTTCTGGGAAAACAACAAGA
GAGCAATTTGTGTTCATCATATCAAGAGTGTTTTAAATCAGtggagaaaa
ttttggaaaatctgaataCGCACTACGGAAACAGCCGATTCTCTTTCATC
AAAGTCCCTAGTTGTATTCCACGCCTGTGGTTAGTGTCGAATTCCAGTGG
AGTCGTAATTGAAGATTGCAACGGCAAAGAAATGGATACGACGGGTCTTC
CACCAGTGCCCACGTGCGCAAACTTTTTCTTGTTACACCCAAGCGACGTT
AATAAATGCTCGGAGCTCAAGAAGGATGCCTCTGCGTGGACTGCGTGGAA
GAGAGGGGTGGAAACCAAATGGAAAATTGAGCCATCATTCCAGCCAAGAG
ATAACGTGAAATGCTATGTATTATTAGGAATTTTGAACTAAAAAATTGTA
CATAATTTCATTAACATGTATTTTGTTCAAAGAAAAGGAATCAAAGTGAA
TCAAAGAACATGAGAATCATATCATATATATcatagtctagcatgctaga
cgacTTAACTCAGTAAAAAATAGGAAGAAGAAAACTTGACAGGAgcatca
atatagtcgtctagaatattttgtgcacaacaaacttttcataaaaattc
tcttttttcatgtttttggataacattttcagggggccttgttggtttgt
tttggtttgtttttttttctttcacttagaaattctcattggctgaaatt
tttatttgtttatatattttgttgtataagattgttttctcaccccgcag
aaatctgcgggccctgctggaactcccgtaagctacggaaaccaccttag
cccagtcgtttattttaaccatatcccgacataaaaatttcccgctttca
acaaaaacgttataaacgactggattccca Run BLAST on NCBI transcript from alignment at scaffold_94:328559..329638 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073577 ID=TCONS_00073577|Name=TCONS_00073577|organism=Clytia hemisphaerica|type=transcript|length=1080bp|location=Sequence derived from alignment at scaffold_94:328559..329638 (Clytia hemisphaerica)
tgggaatccagtcgtttataacgtttttgttgaaagcgggaaatttttat
gtcgggatatggttaaaataaacgactgggctaaggtggtttccgtagct
tacgggagttccagcagggcccgcagatttctgcggggtgagaaaacaat
cttatacaacaaaatatataaacaaataaaaatttcagccaatgagaatt
tctaagtgaaagaaaaaaaaacaaaccaaaacaaaccaacaaggccccct
gaaaatgttatccaaaaacatgaaaaaagagaatttttatgaaaagtttg
ttgtgcacaaaatattctagacgactatattgatgcTCCTGTCAAGTTTT
CTTCTTCCTATTTTTTACTGAGTTAAgtcgtctagcatgctagactatgA
TATATATGATATGATTCTCATGTTCTTTGATTCACTTTGATTCCTTTTCT
TTGAACAAAATACATGTTAATGAAATTATGTACAATTTTTTAGTTCAAAA
TTCCTAATAATACATAGCATTTCACGTTATCTCTTGGCTGGAATGATGGC
TCAATTTTCCATTTGGTTTCCACCCCTCTCTTCCACGCAGTCCACGCAGA
GGCATCCTTCTTGAGCTCCGAGCATTTATTAACGTCGCTTGGGTGTAACA
AGAAAAAGTTTGCGCACGTGGGCACTGGTGGAAGACCCGTCGTATCCATT
TCTTTGCCGTTGCAATCTTCAATTACGACTCCACTGGAATTCGACACTAA
CCACAGGCGTGGAATACAACTAGGGACTTTGATGAAAGAGAATCGGCTGT
TTCCGTAGTGCGtattcagattttccaaaattttctccaCTGATTTAAAA
CACTCTTGATATGATGAACACAAATTGCTCTCTTGTTGTTTTCCCAGAAA
ATATTTCTCTGCGCATCATGTAAGTCGGTACATGTTTGAGATAAACACTT
CGTCCATTTTGAATGCCTTGTAAAGATGAAGAAGACAAAACTGCAAACTG
CTTCGTTCGAACGTTAAAATCCAAGAAAACGTACTGTTTTTAGATAGATC
GCTTAATTCTCCTTTTATCCTTTCTCGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073577-exon-scaffold_94-1491911889:328559..329638 | TCONS_00073577-exon-scaffold_94-1491911889:328559..329638 | Clytia hemisphaerica | exon |
| TCONS_00073577-exon-scaffold_94-1510915933:328559..329638 | TCONS_00073577-exon-scaffold_94-1510915933:328559..329638 | Clytia hemisphaerica | exon |
| TCONS_00073577-exon-scaffold_94-1575043694:328559..329638 | TCONS_00073577-exon-scaffold_94-1575043694:328559..329638 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_94 | supercontig | scaffold_94:328559..329638 . |
Blast
The following BLAST results are available for this feature:
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