Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073542 ID=TCONS_00073542|Name=TCONS_00073542|organism=Clytia hemisphaerica|type=transcript|length=486bp
AAAGTCAACTTGAGTCAAAGTAAATTCTTTCTCCAGCTCTTGATAGCctt
tataaagatttttttttttacgatTTCAGCAATAAATAAGATCAATTTGC
TATACATTCTGTCTCTCTCAACAACATACTTTTCAACATGAAGAATAGTT
TATCAACGAAAACACCTTGAACTATAATTGAAACCAAATGATACATAAAA
CATCAGtgTCATTTGGAAATGCGTGACATGAACCTTAGCTTTGAAGATGA
GCTCACTTTCTCTCCAAAGCTTAATTCGTTGAGCTTGAAATTAGCTAGCT
CCAACAGAACATCAATTATGGAGAGATCACCAAAAGAGAAAGAAGACGGG
CTAGATTCGTCCTTTACTTTCCAGCCTGTGGTTGGATCGAACAGTTCAAA
GATCGTGGCCAAATTAAAAACAGGATTTTGGGAGAGACAGAAACTTCATG
TTAAGAGACAGAAACAAAAGGTTAGTTAACTTTTTC Run BLAST on NCBI transcript from alignment at scaffold_94:271365..272435- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073542 ID=TCONS_00073542|Name=TCONS_00073542|organism=Clytia hemisphaerica|type=transcript|length=1071bp|location=Sequence derived from alignment at scaffold_94:271365..272435- (Clytia hemisphaerica)
AAAGTCAACTTGAGTCAAAGTAAATTCTTTCTCCAGCTCTTGATAGCCTT
TATAAAGATTTTTTTTTTTACGATTTCAGCAATAAATAAGATCAATTTGC
TATACATTCTGTCTCTCTCAACAACATACTTTTCAACATGAAGAATAGTT
TATCAACGAAAACACCTTGAACTATAATTGAAACCAAATGATACATAAAA
CATCAGGTAGGTTCAATCATTAATTTTTCTTGTGCTTTTAATCTAATGAA
GATAGAGCATAATTCATTTCGAGAAAAATTATTTTACACCTCACCTGACC
ATGGCCCATGGGCCCCCCAGCCCACCCTCTCACTGGCTAACACATTATTC
AGGCTCATCTAGGAAATCTTCCTAAATTTTCGCTTTTGTGTGTTGGGGAA
GAAAGGTCCTATTCCGAAGAGTATACAATTTCCCCAGAAAGCCTCTTCTA
AACTTTACAGATCATCTAAATGATGACGCAATGTTTTGAGCTCCAAACCT
GACCCTAACTGATAAGATCGAAATAATCAAAAATCGAAAATATCGAAAAG
GTCAAAAAAGAAGAGTAAAAAAATTCCACTTTTGGCCATCCACAACCCCG
ACCGAAAGGTGACTGAACCACCCCTACCCTACCCAATTGTTTATCACGGG
AATTAACTACTAAAAGAACGACAAATTACGCATGCGTGTTAATGCAGAAG
TCTCATTTTTTAACTCTTCGTAATGGGACCTTTCTCTGACTGGTTGAATT
TGACAGAACTCTTACTATTATTTCTTTTTTCTTTATTTCAGTGTCATTTG
GAAATGCGTGACATGAACCTTAGCTTTGAAGATGAGCTCACTTTCTCTCC
AAAGCTTAATTCGTTGAGCTTGAAATTAGCTAGCTCCAACAGAACATCAA
TTATGGAGAGATCACCAAAAGAGAAAGAAGACGGGCTAGATTCGTCCTTT
ACTTTCCAGCCTGTGGTTGGATCGAACAGTTCAAAGATCGTGGCCAAATT
AAAAACAGGATTTTGGGAGAGACAGAAACTTCATGTTAAGAGACAGAAAC
AAAAGGTTAGTTAACTTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073542-exon-scaffold_94-1575043694:272230..272435 | TCONS_00073542-exon-scaffold_94-1575043694:272230..272435 | Clytia hemisphaerica | exon |
| TCONS_00073542-exon-scaffold_94-1575043694:271365..271644 | TCONS_00073542-exon-scaffold_94-1575043694:271365..271644 | Clytia hemisphaerica | exon |
| TCONS_00073542-exon-scaffold_94-1510915933:272230..272435 | TCONS_00073542-exon-scaffold_94-1510915933:272230..272435 | Clytia hemisphaerica | exon |
| TCONS_00073542-exon-scaffold_94-1510915933:271365..271644 | TCONS_00073542-exon-scaffold_94-1510915933:271365..271644 | Clytia hemisphaerica | exon |
| TCONS_00073542-exon-scaffold_94-1491911889:272230..272435 | TCONS_00073542-exon-scaffold_94-1491911889:272230..272435 | Clytia hemisphaerica | exon |
| TCONS_00073542-exon-scaffold_94-1491911889:271365..271644 | TCONS_00073542-exon-scaffold_94-1491911889:271365..271644 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_94 | supercontig | scaffold_94:271365..272435 - |
Blast
The following BLAST results are available for this feature:
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