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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073510 ID=TCONS_00073510|Name=TCONS_00073510|organism=Clytia hemisphaerica|type=transcript|length=814bp
ctctaaacggacgatagcatcgtctacactttttcttgcttgagaaaggt
tgaagattcaccTCTAACCTTTGGTTAAAGATTCACCTCTAACCTTTGGT
TAAAGATTCACCTCTAACCTTCGGCTTTAAACTTAACACTTATAGTCTTT
AAAACATTGAAATGGTTTCTGCATGAAAGTTGGAGTAAGCGCCAACTAAA
ATCATATATACTAATTCGCTTCTAACCTAGCTGGCACACagcgtcgtttc
aacgtttatctaatgttcataacgtccatataacgttagttgaacgttga
aacaatgttgtgtgccagctgggaacttACTTTGATTGTAAACAACGTGA
AGTCCTTCGTTTGTCAAATGTGATGGGAggtaaatgacgtcatcaaagaa
TGTTGGTGTCGTTCCGCCGAAATAAAACGCATTTAAATCAGCTTGGGTAT
GAACACCGACTGAGGCCTCGAATAACTCATTgttgaaaatacaatgaaat
tTTCCATCATGTGAGTTATATGTTAACCCAAACAACATCCATTCTTTGAA
CTGCTTATCTTTGAACTGGTTTAATTGACAAAAAGCGTAATCGGTGTTTG
TATGGAATTCAATGGATATCTTTTTTCCAAACCAAATAGAGAACCCTTGT
TGAGTTGATCGAAAGCCTTGGCTAACTAGAACAGCATATCCAGTTTCAAC
ATCAATATTGCGTGGATAAAGAGCTCTTACCCAGAAAGCAAGAGTGAATC
CGTTTGGACAAGCAGTTGGTAAAGCTGACAAAGAAGTAACGAATGAAGAT
TGCCtattaaaaag Run BLAST on NCBI protein sequence of TCONS_00073510-protein >TCONS_00073510-protein ID=TCONS_00073510-protein|Name=TCONS_00073510-protein|organism=Clytia hemisphaerica|type=polypeptide|length=184bp
LFNRQSSFVTSLSALPTACPNGFTLAFWVRALYPRNIDVETGYAVLVSQG
FRSTQQGFSIWFGKKISIEFHTNTDYAFCQLNQFKDKQFKEWMLFGLTYN
SHDGKFHCIFNNELFEASVGVHTQADLNAFYFGGTTPTFFDDVIYLPSHL
TNEGLHVVYNQSKFPAGTQHCFNVQLTLYGRYEH Run BLAST on NCBI transcript from alignment at scaffold_93:194..1007 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073510 ID=TCONS_00073510|Name=TCONS_00073510|organism=Clytia hemisphaerica|type=transcript|length=814bp|location=Sequence derived from alignment at scaffold_93:194..1007 (Clytia hemisphaerica)
ctttttaataGGCAATCTTCATTCGTTACTTCTTTGTCAGCTTTACCAAC
TGCTTGTCCAAACGGATTCACTCTTGCTTTCTGGGTAAGAGCTCTTTATC
CACGCAATATTGATGTTGAAACTGGATATGCTGTTCTAGTTAGCCAAGGC
TTTCGATCAACTCAACAAGGGTTCTCTATTTGGTTTGGAAAAAAGATATC
CATTGAATTCCATACAAACACCGATTACGCTTTTTGTCAATTAAACCAGT
TCAAAGATAAGCAGTTCAAAGAATGGATGTTGTTTGGGTTAACATATAAC
TCACATGATGGAAaatttcattgtattttcaacAATGAGTTATTCGAGGC
CTCAGTCGGTGTTCATACCCAAGCTGATTTAAATGCGTTTTATTTCGGCG
GAACGACACCAACAttctttgatgacgtcatttaccTCCCATCACATTTG
ACAAACGAAGGACTTCACGTTGTTTACAATCAAAGTaagttcccagctgg
cacacaacattgtttcaacgttcaactaacgttatatggacgttatgaac
attagataaacgttgaaacgacgctGTGTGCCAGCTAGGTTAGAAGCGAA
TTAGTATATATGATTTTAGTTGGCGCTTACTCCAACTTTCATGCAGAAAC
CATTTCAATGTTTTAAAGACTATAAGTGTTAAGTTTAAAGCCGAAGGTTA
GAGGTGAATCTTTAACCAAAGGTTAGAGGTGAATCTTTAACCAAAGGTTA
GAggtgaatcttcaacctttctcaagcaagaaaaagtgtagacgatgcta
tcgtccgtttagag Coding sequence (CDS) from alignment at scaffold_93:194..1007 >TCONS_00073510 ID=TCONS_00073510|Name=TCONS_00073510|organism=Clytia hemisphaerica|type=CDS|length=555bp|location=Sequence derived from alignment at scaffold_93:194..1007 (Clytia hemisphaerica)
ctttttaataGGCAATCTTCATTCGTTACTTCTTTGTCAGCTTTACCAAC
TGCTTGTCCAAACGGATTCACTCTTGCTTTCTGGGTAAGAGCTCTTTATC
CACGCAATATTGATGTTGAAACTGGATATGCTGTTCTAGTTAGCCAAGGC
TTTCGATCAACTCAACAAGGGTTCTCTATTTGGTTTGGAAAAAAGATATC
CATTGAATTCCATACAAACACCGATTACGCTTTTTGTCAATTAAACCAGT
TCAAAGATAAGCAGTTCAAAGAATGGATGTTGTTTGGGTTAACATATAAC
TCACATGATGGAAaatttcattgtattttcaacAATGAGTTATTCGAGGC
CTCAGTCGGTGTTCATACCCAAGCTGATTTAAATGCGTTTTATTTCGGCG
GAACGACACCAACAttctttgatgacgtcatttaccTCCCATCACATTTG
ACAAACGAAGGACTTCACGTTGTTTACAATCAAAGTaagttcccagctgg
cacacaacattgtttcaacgttcaactaacgttatatggacgttatgaac
attag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073510-exon-scaffold_93-1491911889:194..1007 | TCONS_00073510-exon-scaffold_93-1491911889:194..1007 | Clytia hemisphaerica | exon |
| TCONS_00073510-exon-scaffold_93-1510915933:194..1007 | TCONS_00073510-exon-scaffold_93-1510915933:194..1007 | Clytia hemisphaerica | exon |
| TCONS_00073510-exon-scaffold_93-1575043694:194..1007 | TCONS_00073510-exon-scaffold_93-1575043694:194..1007 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_93 | supercontig | scaffold_93:194..1007 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013320 | ConA-like_dom |
Blast
The following BLAST results are available for this feature:
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