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TCONS_00073509 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073509
Unique NameTCONS_00073509
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3656

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073509 ID=TCONS_00073509|Name=TCONS_00073509|organism=Clytia hemisphaerica|type=transcript|length=3656bp
GCGGAGAGAGATATTTTCggacaagtatcaacccttTCAAGGTTCGTTTT
CTCATGACTCTCAGAAAAAATTTATACCACACTTTGTTGAATCGTTTGTC
GGCATGCTTCTCCATGGTACGAACTTTAATAAGAACAATGAATACTTGGA
GCAAAATAAGCTTACTGTATCACAACTCATCGTGCAAAATTCTATAAAAC
GTACACGAAAAGACTCAACTTCATGTGTCTTTAACAAAAGCCGAGAATCA
CCGATGTCTACCTACCTTGGATTAATGGTCCATGCCAAGACAAGAAAAAA
AGGACTTATCGAAGAGCTTAACGAATTGGGACTCTCGATTCCACATAGGC
GTGTTTTGAGCTTGACAGATTCACTTTGCGCAACTGTATTGAAGGAATAC
AAAGAAGATAAAGTTGTGAGTCCCAGAAATCTAAAGAAAGGCGAGTTCAC
TGCTGGAGCATTGGATAACTTGGATATAGACCCATCATCGTCAACATCCA
AGGGCTCATTTCATGGAACAGCGATATCATTGTTTCAACGAAAAACCGAC
GACCATAATAGCAGTGAGAACAGAAGAACTTCTTTGGAAAAAGGTGATAA
GCTAGCCTCACTACCAACATCTTATTCGGAGGTGACACCCGTTTCATATT
TCAACCAACACCCTGAAACAAGAGATTACTCAAACGTTCAAATAGATTCA
ACGACTTCTGAAGAAGCTACAACGAGCGCTCAAGAAGATTCAACGATTCA
AACTGACAATCAAGAGAAAAGATGGTTGGATCATGTCGAAGAGCAACTTT
CAGTTGATGAGGAGGAGAGATCAAAGAATATGTCGTGGTCAGCTTTCAAC
GCAGCTGAAGAAACCACCGAAAAACCTACAGATATTTCAGCACTCTTACC
ACTGTTTCCCGATGACTCGAAATCCATCGCGATGATGAAACATGGAATGG
ACGTCATCAAACAAGCGGTCCAGCATTTGAATGGTGATCAATCTCCTGTC
ATCGCGTTTGATCAGCCTCTCTTTGCCAACGCCAAACTCGTTCAGTGGAA
TTGGAAAGAAGATTACGGTGAAGATAAGTTTGTTGCCATGATGGGCCCCT
TACACATTGAAATGGCGTTTATGAATGTTATTGAAAAGACGTGACATGAC
TCTATAAACAAGTTAATGACAATGACAGTAACAGGTGACAAAACGTTAGA
CGTAACTAAATTGTGACGAAAATACAAAACCAAAATGGTGACTGGCTGGA
GGAAGCTGGATGGTGCCACGTCATCTCGGAGGCTGATATCGCTACTTCAG
GGAAAGCAGAATCGTTTCTCAACGCATCGCACGTCAAACGGACACGTTAC
GGTCACGAAGTTACAGCTGCTGTGCTTCACATCCTGATGAATAAGTCATA
TCAAGAACACTGGTTCTCAACTAAAGTGCCACGGAATTTTGAAGATTGGA
AAAAGTCACAAGAAAAGGAATTCCCTCAATTCCGGTTTTGGTCGACAACA
CTCAAAATGGAATTGCTGTTACTAGAGTTTGTTCGGTCCATCAGGAGTGC
AGACTTTGCCCTCTATAAAGAGTCAATCAGCAAGCTGCTTCCATGGTTTT
TTGCGATGGATCATACAAACTATGCTCGTTGGCTATCGATTCATCTATAC
GATATGTTGGAGTTGCCCCAAACCAACCCGATAGTCAACGAGTATTTTGA
AGCTGGTCGATTTGTTATTACCAAAACAAAACGAAAATTCTCCTCTATCG
GCATCGACCACGCCCATGAGCAAAACAACAAATGTGTCAAAGGAGATGGA
GGTGCTGTTGGATTGACTGAAAATCCCTCTCAGCTTCTAAAGTGGATGGT
TGCAGGACCTGAATTAGCTCGATTCGTAAACGAATTCGAAGATAGCCTAC
CTTTCAATAAAGTTAAGGAAATCACAGATGAAACGAAGCATCATGAGCAA
ACCGAAGGTATGCAACAACGATTTGCGACGCATGTGTCAACCTTCTTATC
CTGTTTTGAAGATATTGGTAATCCATTCCTTGAAGAAACACAAGATCTAA
TCGCCTTAGACACAAAAGATGTTGCTGAGGAGGTAGCCATCATAAACCTC
AACAAAGCAGAGATGGTAGGAAAAGAAATGTTCGATGTTTTCGTGAAGGA
TCATATCAAGGGGAAGGACAAAAGTATATTTGACACAATCTCAAAGAACA
AGCTAGCCATTTTCAACCAACCAAAGCAGAGAAGTATAAGCAACAAAGAT
GAATTAACAACACTCAAGAAAAGTTGCCACCTATTTTCCCAGTTGTACAT
TGCGTGTCAAGTCCGAGATAGCAACttggacgagttttttgcccaTGAGA
ACACAGCTTTTCCACCATCGCTATCAAAGAACGGAAATTTAAGATCTGGA
AATAAAGCTGATTTAACGACATGTTTGCGTAAAGTGGTGACGGAAACTGG
TCCACAAAAAGTTGATACTGATTGCCTCATCCTTGATGGTGCAGCTATTG
TTAACATCTTGAAACCGACTAGAGCTTCGACATTTCACGAATACTCCAAA
GAATTCACACAGTTCGTCAAAAATCAAATCACTAGCGTCAATCGTCTCGA
TATTGTTTGGGACGTCTACATCGAGAAATCACTAAAACTTTCCGCCAGAA
CAAAGAGAGGTAAAGGAACTCGGAGAAAGGTGTTAGAAGATACACGAATC
CCTGGAAATTGGCAATCATTCTTACGAGTGGACAAAAACAAAGAGGAGCT
TTTCAGATTTTTGGCTCGCGAATCGATCAAAATTTCCACAAGGAAAGCGA
TAATCAGCAGTATTGACGATTCTGCAATTTCCAACCACCACGATTGTTCT
TTTCTCTCCGTTTGCAACCACGAAGAAGCCGATACCAGAATGTTTCTTCA
CGCTAAAGATGCGAGTAATTCAGGAATCAAGAAAATTTGTATCCGAACCG
TTGATACCGATGTGGTTACAATCGCTGTTGGAATGTTTTCACAACTTGGC
ATAAGGGAGCTGTGGATATCTTTCGGTGTCGGTAAGAATCACCACATGAT
ACCAATCCACTCAATTTGTAAAAGTCTTGGTGATGTCAAAAGTAGATGCC
TCCCACTTTTCCATGCTCTTACGGGCTGTGATCAAGTCTCGTTTTTCAGT
GGTAGAGGTAAAAAGAATGCTTGGAATACATGGCAAAAGTTCGATGATTT
GACAACGTGTCTTCTATCACTTATTGGAAAACCATCGATCCAAGTTGTTG
AATCATCCTTTCCAACAATCGAAAGGTTTATCGTCCTTCTTTACGATCGA
ACGAGTCAAGATACGGAGGTCAATGTCTTGAGAAAACACCTGTTTGCAAT
CAAAGGTCGGTCGTTAGAATGTATTCCACCAACACAAGATGCTCTTTTCG
AACAGGTCAAACGCATGGTATATCAAGGTGGCTACTGCTGGGGTCAATCG
ATTGTGCCAGTGCAAGATCTTCCAAAGCCTGAAAACTGGGGCTGGAATGA
TAATGGTAACAAATATGATGTTAAATGGACAACTTTGCCTGAAGCCTCAA
AGATCTGTAAAGAGCTTGTAAAATGTGGTTGTAATAAAGAGAAAGGATGC
AAAGGTAGATGCAAATGTAAAAAGGCTAACCTAAAATGTACAGAACTTTG
TAAATG
Run BLAST on NCBI

protein sequence of TCONS_00073509-protein

>TCONS_00073509-protein ID=TCONS_00073509-protein|Name=TCONS_00073509-protein|organism=Clytia hemisphaerica|type=polypeptide|length=756bp
MNKSYQEHWFSTKVPRNFEDWKKSQEKEFPQFRFWSTTLKMELLLLEFVR
SIRSADFALYKESISKLLPWFFAMDHTNYARWLSIHLYDMLELPQTNPIV
NEYFEAGRFVITKTKRKFSSIGIDHAHEQNNKCVKGDGGAVGLTENPSQL
LKWMVAGPELARFVNEFEDSLPFNKVKEITDETKHHEQTEGMQQRFATHV
STFLSCFEDIGNPFLEETQDLIALDTKDVAEEVAIINLNKAEMVGKEMFD
VFVKDHIKGKDKSIFDTISKNKLAIFNQPKQRSISNKDELTTLKKSCHLF
SQLYIACQVRDSNLDEFFAHENTAFPPSLSKNGNLRSGNKADLTTCLRKV
VTETGPQKVDTDCLILDGAAIVNILKPTRASTFHEYSKEFTQFVKNQITS
VNRLDIVWDVYIEKSLKLSARTKRGKGTRRKVLEDTRIPGNWQSFLRVDK
NKEELFRFLARESIKISTRKAIISSIDDSAISNHHDCSFLSVCNHEEADT
RMFLHAKDASNSGIKKICIRTVDTDVVTIAVGMFSQLGIRELWISFGVGK
NHHMIPIHSICKSLGDVKSRCLPLFHALTGCDQVSFFSGRGKKNAWNTWQ
KFDDLTTCLLSLIGKPSIQVVESSFPTIERFIVLLYDRTSQDTEVNVLRK
HLFAIKGRSLECIPPTQDALFEQVKRMVYQGGYCWGQSIVPVQDLPKPEN
WGWNDNGNKYDVKWTTLPEASKICKELVKCGCNKEKGCKGRCKCKKANLK
CTELCK
Run BLAST on NCBI

transcript from alignment at scaffold_93:214235..218621-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073509 ID=TCONS_00073509|Name=TCONS_00073509|organism=Clytia hemisphaerica|type=transcript|length=4387bp|location=Sequence derived from alignment at scaffold_93:214235..218621- (Clytia hemisphaerica)
GCGGAGAGAGATATTTTCGGACAAGTATCAACCCTTTCAAGGTTCGTTTT CTCATGACTCTCAGAAAAAATTTATACCACACTTTGTTGAATCGTTTGTC GGCATGCTTCTCCATGGTACGAACTTTAATAAGAACAATGAATACTTGGA GCAAAATAAGCTTACTGTATCACAACTCATCGTGCAAAATTCTATAAAAC GTACACGAAAAGACTCAACTTCATGTGTCTTTAACAAAAGCCGAGAATCA CCGATGTCTACCTACCTTGGATTAATGGTCCATGCCAAGACAAGAAAAAA AGGACTTATCGAAGAGCTTAACGAATTGGGACTCTCGATTCCACATAGGC GTGTTTTGAGCTTGACAGATTCACTTTGCGCAACTGTATTGAAGGAATAC AAAGAAGATAAAGTTGTGAGTCCCAGAAATCTAAAGAAAGGCGAGTTCAC TGCTGGAGCATTGGATAACTTGGATATAGACCCATCATCGTCAACATCCA AGGGCTCATTTCATGGAACAGCGATATCATTGTTTCAACGAAAAACCGAC GACCATAATAGCAGTGAGAACAGAAGAACTTCTTTGGAAAAAGGTGATAA GCTAGCCTCACTACCAACATCTTATTCGGAGGTGACACCCGTTTCATATT TCAACCAACACCCTGAAACAAGAGATTACTCAAACGTTCAAATAGATTCA ACGACTTCTGAAGAAGCTACAACGAGCGCTCAAGAAGATTCAACGATTCA AACTGACAATCAAGAGAAAAGGTACTTCAATTCAATTTTGGAACTAGGTT AACGTTCGTATAACAACTTACTAACAATTAGAATATGGTGTTTTCAATCT ATAGAGAAGTTAGGAAAGTCTTGTAATATTTATATTTAGTATTTGGTGAA TAAGATAAATAAATTTTCTCTACTCAGATGGTTGGATCATGTCGAAGAGC AACTTTCAGTTGATGAGGAGGAGAGATCAAAGAATATGTCGTGGTCAGCT TTCAACGCAGCTGAAGAAACCACCGAAAAACCTACAGATATTTCAGCACT CTTACCACTGTTTCCCGATGACTCGAAATCCATCGCGATGATGAAACATG GAATGGACGTCATCAAACAAGCGGTCCAGCATTTGAATGGTGATCAATCT CCTGTCATCGCGTTTGATCAGCCTCTCTTTGCCAACGCCAAACTCGTTCA GTGGAATTGGAAAGAAGATTACGGTGAAGATAAGTTTGTTGCCATGATGG GCCCCTTACACATTGAAATGGCGTTTATGAATGTTATTGGTAAGTCTAAC TTTCAGCATTTCGCTTTCCTTTAATTTCAATCACCTTCATCAGCGATGAC GATCTAAAGTTGTACACCTTAACTTAAAATCTTGTATCTTCTTCCTTAGA AAAGACGTGACATGACTCTATAAACAAGTTAATGACAATGACAGTAACAG GTGACAAAACGTTAGACGTAACTAAATTGTGACGAAAATACAAAACCAAA ATGGTATGACTATGATTGACATTTGAATAAAACTGAAACTATGACAAATA GGAAATTCCTTAACACTGTTAATAACAGGGTTTTTGGATAATTTATTTTG CAATAAACTCTTATTCCAACTCTTTTCTCCAGGTGACTGGCTGGAGGAAG CTGGATGGTGCCACGTCATCTCGGAGGCTGATATCGCTACTTCAGGGAAA GCAGAATCGTTTCTCAACGCATCGCACGTCAAACGGACACGTTACGGTCA CGAAGTTACAGCTGCTGTGCTTCACATCCTGATGAATAAGTCATATCAAG AACACTGGTTCTCAACTAAAGTGCCACGGAATTTTGAAGATTGGAAAAAG TCACAAGAAAAGGAATTCCCTCAATTCCGGTTTTGGTCGACAACACTCAA AATGGAATTGCTGTTACTAGAGTTTGTTCGGTCCATCAGGAGTGCAGACT TTGCCCTCTATAAAGAGTCAATCAGCAAGCTGCTTCCATGGTTTTTTGCG ATGGATCATACAAACTATGCTCGTTGGCTATCGATTCATCTATACGATAT GTTGGAGTTGCCCCAAACCAACCCGATAGTCAACGAGTATTTTGAAGCTG GTCGATTTGTTATTACCAAAACAAAACGAAAATTCTCCTCTATCGGCATC GACCACGCCCATGAGCAAAACAACAAATGTGTCAAAGGAGATGGAGGTAT GAATCCATTTTTGGGGGGATAAAACTGAAAGTAGTATTTCATAGTAAATT AATTTGCTTGACTGTTTTTTTTGTTCCTTTATGCAATTATGTAATTGTTA CTAAAAGCATGCAGCAACATTGCCATATCTTCAGAAAAAGGCATAAATAA ATTTCAAAACCGGTTGCCTTGTAGGTGCTGTTGGATTGACTGAAAATCCC TCTCAGCTTCTAAAGTGGATGGTTGCAGGACCTGAATTAGCTCGATTCGT AAACGAATTCGAAGATAGCCTACCTTTCAATAAAGTTAAGGAAATCACAG ATGAAACGAAGCATCATGAGCAAACCGAAGGTATGCAACAACGATTTGCG ACGCATGTGTCAACCTTCTTATCCTGTTTTGAAGATATTGGTAATCCATT CCTTGAAGAAACACAAGATCTAATCGCCTTAGACACAAAAGATGTTGCTG AGGAGGTAGCCATCATAAACCTCAACAAAGCAGAGATGGTAGGAAAAGAA ATGTTCGATGTTTTCGTGAAGGATCATATCAAGGGGAAGGACAAAAGTAT ATTTGACACAATCTCAAAGAACAAGCTAGCCATTTTCAACCAACCAAAGC AGAGAAGTATAAGCAACAAAGATGAATTAACAACACTCAAGAAAAGTTGC CACCTATTTTCCCAGTTGTACATTGCGTGTCAAGTCCGAGATAGCAACTT GGACGAGTTTTTTGCCCATGAGAACACAGCTTTTCCACCATCGCTATCAA AGAACGGAAATTTAAGATCTGGAAATAAAGCTGATTTAACGACATGTTTG CGTAAAGTGGTGACGGAAACTGGTCCACAAAAAGTTGATACTGATTGCCT CATCCTTGATGGTGCAGCTATTGTTAACATCTTGAAACCGACTAGAGCTT CGACATTTCACGAATACTCCAAAGAATTCACACAGTTCGTCAAAAATCAA ATCACTAGCGTCAATCGTCTCGATATTGTTTGGGACGTCTACATCGAGAA ATCACTAAAACTTTCCGCCAGAACAAAGAGAGGTTTGTAACAATCTTTTA CATTTTGGAGATATTTTATTTCTACTTTAACTAGCAAGTAAACATTAATG GATTGCTCTGTTTTATTACACCTCGAATTTCTTAAAAACTTTCTTACGCA TTCAAATTTCTTAAAATCTTAATAATTTTGCGCTTTTTAGGTAAAGGAAC TCGGAGAAAGGTGTTAGAAGATACACGAATCCCTGGAAATTGGCAATCAT TCTTACGAGTGGACAAAAACAAAGAGGAGCTTTTCAGATTTTTGGCTCGC GAATCGATCAAAATTTCCACAAGGAAAGCGATAATCAGCAGTATTGACGA TTCTGCAATTTCCAACCACCACGATTGTTCTTTTCTCTCCGTTTGCAACC ACGAAGAAGCCGATACCAGAATGTTTCTTCACGCTAAAGATGCGAGTAAT TCAGGAATCAAGAAAATTTGTATCCGAACCGTTGATACCGATGTGGTTAC AATCGCTGTTGGAATGTTTTCACAACTTGGCATAAGGGAGCTGTGGATAT CTTTCGGTGTCGGTAAGAATCACCACATGATACCAATCCACTCAATTTGT AAAAGTCTTGGTGATGTCAAAAGTAGATGCCTCCCACTTTTCCATGCTCT TACGGGCTGTGATCAAGTCTCGTTTTTCAGTGGTAGAGGTAAAAAGAATG CTTGGAATACATGGCAAAAGTTCGATGATTTGACAACGTGTCTTCTATCA CTTATTGGAAAACCATCGATCCAAGTTGTTGAATCATCCTTTCCAACAAT CGAAAGGTTTATCGTCCTTCTTTACGATCGAACGAGTCAAGATACGGAGG TCAATGTCTTGAGAAAACACCTGTTTGCAATCAAAGGTCGGTCGTTAGAA TGTATTCCACCAACACAAGATGCTCTTTTCGAACAGGTCAAACGCATGGT ATATCAAGGTGGCTACTGCTGGGGTCAATCGATTGTGCCAGTGCAAGATC TTCCAAAGCCTGAAAACTGGGGCTGGAATGATAATGGTAACAAATATGAT GTTAAATGGACAACTTTGCCTGAAGCCTCAAAGATCTGTAAAGAGCTTGT AAAATGTGGTTGTAATAAAGAGAAAGGATGCAAAGGTAGATGCAAATGTA AAAAGGCTAACCTAAAATGTACAGAACTTTGTAAATG

Coding sequence (CDS) from alignment at scaffold_93:214235..218621-

>TCONS_00073509 ID=TCONS_00073509|Name=TCONS_00073509|organism=Clytia hemisphaerica|type=CDS|length=6804bp|location=Sequence derived from alignment at scaffold_93:214235..218621- (Clytia hemisphaerica)
GTAAAGGAACTCGGAGAAAGGTGTTAGAAGATACACGAATCCCTGGAAAT
TGGCAATCATTCTTACGAGTGGACAAAAACAAAGAGGAGCTTTTCAGATT
TTTGGCTCGCGAATCGATCAAAATTTCCACAAGGAAAGCGATAATCAGCA
GTATTGACGATTCTGCAATTTCCAACCACCACGATTGTTCTTTTCTCTCC
GTTTGCAACCACGAAGAAGCCGATACCAGAATGTTTCTTCACGCTAAAGA
TGCGAGTAATTCAGGAATCAAGAAAATTTGTATCCGAACCGTTGATACCG
ATGTGGTTACAATCGCTGTTGGAATGTTTTCACAACTTGGCATAAGGGAG
CTGTGGATATCTTTCGGTGTCGGTAAGAATCACCACATGATACCAATCCA
CTCAATTTGTAAAAGTCTTGGTGATGTCAAAAGTAGATGCCTCCCACTTT
TCCATGCTCTTACGGGCTGTGATCAAGTCTCGTTTTTCAGTGGTAGAGGT
AAAAAGAATGCTTGGAATACATGGCAAAAGTTCGATGATTTGACAACGTG
TCTTCTATCACTTATTGGAAAACCATCGATCCAAGTTGTTGAATCATCCT
TTCCAACAATCGAAAGGTTTATCGTCCTTCTTTACGATCGAACGAGTCAA
GATACGGAGGTCAATGTCTTGAGAAAACACCTGTTTGCAATCAAAGGTCG
GTCGTTAGAATGTATTCCACCAACACAAGATGCTCTTTTCGAACAGGTCA
AACGCATGGTATATCAAGGTGGCTACTGCTGGGGTCAATCGATTGTGCCA
GTGCAAGATCTTCCAAAGCCTGAAAACTGGGGCTGGAATGATAATGGTAA
CAAATATGATGTTAAATGGACAACTTTGCCTGAAGCCTCAAAGATCTGTA
AAGAGCTTGTAAAATGTGGTTGTAATAAAGAGAAAGGATGCAAAGGTAGA
TGCAAATGTAAAAAGGCTAACCTAAAATGTACAGAACTTTGTAAAGTGCT
GTTGGATTGACTGAAAATCCCTCTCAGCTTCTAAAGTGGATGGTTGCAGG
ACCTGAATTAGCTCGATTCGTAAACGAATTCGAAGATAGCCTACCTTTCA
ATAAAGTTAAGGAAATCACAGATGAAACGAAGCATCATGAGCAAACCGAA
GGTATGCAACAACGATTTGCGACGCATGTGTCAACCTTCTTATCCTGTTT
TGAAGATATTGGTAATCCATTCCTTGAAGAAACACAAGATCTAATCGCCT
TAGACACAAAAGATGTTGCTGAGGAGGTAGCCATCATAAACCTCAACAAA
GCAGAGATGGTAGGAAAAGAAATGTTCGATGTTTTCGTGAAGGATCATAT
CAAGGGGAAGGACAAAAGTATATTTGACACAATCTCAAAGAACAAGCTAG
CCATTTTCAACCAACCAAAGCAGAGAAGTATAAGCAACAAAGATGAATTA
ACAACACTCAAGAAAAGTTGCCACCTATTTTCCCAGTTGTACATTGCGTG
TCAAGTCCGAGATAGCAACTTGGACGAGTTTTTTGCCCATGAGAACACAG
CTTTTCCACCATCGCTATCAAAGAACGGAAATTTAAGATCTGGAAATAAA
GCTGATTTAACGACATGTTTGCGTAAAGTGGTGACGGAAACTGGTCCACA
AAAAGTTGATACTGATTGCCTCATCCTTGATGGTGCAGCTATTGTTAACA
TCTTGAAACCGACTAGAGCTTCGACATTTCACGAATACTCCAAAGAATTC
ACACAGTTCGTCAAAAATCAAATCACTAGCGTCAATCGTCTCGATATTGT
TTGGGACGTCTACATCGAGAAATCACTAAAACTTTCCGCCAGAACAAAGA
GAGATGAATAAGTCATATCAAGAACACTGGTTCTCAACTAAAGTGCCACG
GAATTTTGAAGATTGGAAAAAGTCACAAGAAAAGGAATTCCCTCAATTCC
GGTTTTGGTCGACAACACTCAAAATGGAATTGCTGTTACTAGAGTTTGTT
CGGTCCATCAGGAGTGCAGACTTTGCCCTCTATAAAGAGTCAATCAGCAA
GCTGCTTCCATGGTTTTTTGCGATGGATCATACAAACTATGCTCGTTGGC
TATCGATTCATCTATACGATATGTTGGAGTTGCCCCAAACCAACCCGATA
GTCAACGAGTATTTTGAAGCTGGTCGATTTGTTATTACCAAAACAAAACG
AAAATTCTCCTCTATCGGCATCGACCACGCCCATGAGCAAAACAACAAAT
GTGTCAAAGGAGATGGAGGTAAAGGAACTCGGAGAAAGGTGTTAGAAGAT
ACACGAATCCCTGGAAATTGGCAATCATTCTTACGAGTGGACAAAAACAA
AGAGGAGCTTTTCAGATTTTTGGCTCGCGAATCGATCAAAATTTCCACAA
GGAAAGCGATAATCAGCAGTATTGACGATTCTGCAATTTCCAACCACCAC
GATTGTTCTTTTCTCTCCGTTTGCAACCACGAAGAAGCCGATACCAGAAT
GTTTCTTCACGCTAAAGATGCGAGTAATTCAGGAATCAAGAAAATTTGTA
TCCGAACCGTTGATACCGATGTGGTTACAATCGCTGTTGGAATGTTTTCA
CAACTTGGCATAAGGGAGCTGTGGATATCTTTCGGTGTCGGTAAGAATCA
CCACATGATACCAATCCACTCAATTTGTAAAAGTCTTGGTGATGTCAAAA
GTAGATGCCTCCCACTTTTCCATGCTCTTACGGGCTGTGATCAAGTCTCG
TTTTTCAGTGGTAGAGGTAAAAAGAATGCTTGGAATACATGGCAAAAGTT
CGATGATTTGACAACGTGTCTTCTATCACTTATTGGAAAACCATCGATCC
AAGTTGTTGAATCATCCTTTCCAACAATCGAAAGGTTTATCGTCCTTCTT
TACGATCGAACGAGTCAAGATACGGAGGTCAATGTCTTGAGAAAACACCT
GTTTGCAATCAAAGGTCGGTCGTTAGAATGTATTCCACCAACACAAGATG
CTCTTTTCGAACAGGTCAAACGCATGGTATATCAAGGTGGCTACTGCTGG
GGTCAATCGATTGTGCCAGTGCAAGATCTTCCAAAGCCTGAAAACTGGGG
CTGGAATGATAATGGTAACAAATATGATGTTAAATGGACAACTTTGCCTG
AAGCCTCAAAGATCTGTAAAGAGCTTGTAAAATGTGGTTGTAATAAAGAG
AAAGGATGCAAAGGTAGATGCAAATGTAAAAAGGCTAACCTAAAATGTAC
AGAACTTTGTAAAGTGCTGTTGGATTGACTGAAAATCCCTCTCAGCTTCT
AAAGTGGATGGTTGCAGGACCTGAATTAGCTCGATTCGTAAACGAATTCG
AAGATAGCCTACCTTTCAATAAAGTTAAGGAAATCACAGATGAAACGAAG
CATCATGAGCAAACCGAAGGTATGCAACAACGATTTGCGACGCATGTGTC
AACCTTCTTATCCTGTTTTGAAGATATTGGTAATCCATTCCTTGAAGAAA
CACAAGATCTAATCGCCTTAGACACAAAAGATGTTGCTGAGGAGGTAGCC
ATCATAAACCTCAACAAAGCAGAGATGGTAGGAAAAGAAATGTTCGATGT
TTTCGTGAAGGATCATATCAAGGGGAAGGACAAAAGTATATTTGACACAA
TCTCAAAGAACAAGCTAGCCATTTTCAACCAACCAAAGCAGAGAAGTATA
AGCAACAAAGATGAATTAACAACACTCAAGAAAAGTTGCCACCTATTTTC
CCAGTTGTACATTGCGTGTCAAGTCCGAGATAGCAACTTGGACGAGTTTT
TTGCCCATGAGAACACAGCTTTTCCACCATCGCTATCAAAGAACGGAAAT
TTAAGATCTGGAAATAAAGCTGATTTAACGACATGTTTGCGTAAAGTGGT
GACGGAAACTGGTCCACAAAAAGTTGATACTGATTGCCTCATCCTTGATG
GTGCAGCTATTGTTAACATCTTGAAACCGACTAGAGCTTCGACATTTCAC
GAATACTCCAAAGAATTCACACAGTTCGTCAAAAATCAAATCACTAGCGT
CAATCGTCTCGATATTGTTTGGGACGTCTACATCGAGAAATCACTAAAAC
TTTCCGCCAGAACAAAGAGAGATGAATAAGTCATATCAAGAACACTGGTT
CTCAACTAAAGTGCCACGGAATTTTGAAGATTGGAAAAAGTCACAAGAAA
AGGAATTCCCTCAATTCCGGTTTTGGTCGACAACACTCAAAATGGAATTG
CTGTTACTAGAGTTTGTTCGGTCCATCAGGAGTGCAGACTTTGCCCTCTA
TAAAGAGTCAATCAGCAAGCTGCTTCCATGGTTTTTTGCGATGGATCATA
CAAACTATGCTCGTTGGCTATCGATTCATCTATACGATATGTTGGAGTTG
CCCCAAACCAACCCGATAGTCAACGAGTATTTTGAAGCTGGTCGATTTGT
TATTACCAAAACAAAACGAAAATTCTCCTCTATCGGCATCGACCACGCCC
ATGAGCAAAACAACAAATGTGTCAAAGGAGATGGAGGTAAAGGAACTCGG
AGAAAGGTGTTAGAAGATACACGAATCCCTGGAAATTGGCAATCATTCTT
ACGAGTGGACAAAAACAAAGAGGAGCTTTTCAGATTTTTGGCTCGCGAAT
CGATCAAAATTTCCACAAGGAAAGCGATAATCAGCAGTATTGACGATTCT
GCAATTTCCAACCACCACGATTGTTCTTTTCTCTCCGTTTGCAACCACGA
AGAAGCCGATACCAGAATGTTTCTTCACGCTAAAGATGCGAGTAATTCAG
GAATCAAGAAAATTTGTATCCGAACCGTTGATACCGATGTGGTTACAATC
GCTGTTGGAATGTTTTCACAACTTGGCATAAGGGAGCTGTGGATATCTTT
CGGTGTCGGTAAGAATCACCACATGATACCAATCCACTCAATTTGTAAAA
GTCTTGGTGATGTCAAAAGTAGATGCCTCCCACTTTTCCATGCTCTTACG
GGCTGTGATCAAGTCTCGTTTTTCAGTGGTAGAGGTAAAAAGAATGCTTG
GAATACATGGCAAAAGTTCGATGATTTGACAACGTGTCTTCTATCACTTA
TTGGAAAACCATCGATCCAAGTTGTTGAATCATCCTTTCCAACAATCGAA
AGGTTTATCGTCCTTCTTTACGATCGAACGAGTCAAGATACGGAGGTCAA
TGTCTTGAGAAAACACCTGTTTGCAATCAAAGGTCGGTCGTTAGAATGTA
TTCCACCAACACAAGATGCTCTTTTCGAACAGGTCAAACGCATGGTATAT
CAAGGTGGCTACTGCTGGGGTCAATCGATTGTGCCAGTGCAAGATCTTCC
AAAGCCTGAAAACTGGGGCTGGAATGATAATGGTAACAAATATGATGTTA
AATGGACAACTTTGCCTGAAGCCTCAAAGATCTGTAAAGAGCTTGTAAAA
TGTGGTTGTAATAAAGAGAAAGGATGCAAAGGTAGATGCAAATGTAAAAA
GGCTAACCTAAAATGTACAGAACTTTGTAAAGTGCTGTTGGATTGACTGA
AAATCCCTCTCAGCTTCTAAAGTGGATGGTTGCAGGACCTGAATTAGCTC
GATTCGTAAACGAATTCGAAGATAGCCTACCTTTCAATAAAGTTAAGGAA
ATCACAGATGAAACGAAGCATCATGAGCAAACCGAAGGTATGCAACAACG
ATTTGCGACGCATGTGTCAACCTTCTTATCCTGTTTTGAAGATATTGGTA
ATCCATTCCTTGAAGAAACACAAGATCTAATCGCCTTAGACACAAAAGAT
GTTGCTGAGGAGGTAGCCATCATAAACCTCAACAAAGCAGAGATGGTAGG
AAAAGAAATGTTCGATGTTTTCGTGAAGGATCATATCAAGGGGAAGGACA
AAAGTATATTTGACACAATCTCAAAGAACAAGCTAGCCATTTTCAACCAA
CCAAAGCAGAGAAGTATAAGCAACAAAGATGAATTAACAACACTCAAGAA
AAGTTGCCACCTATTTTCCCAGTTGTACATTGCGTGTCAAGTCCGAGATA
GCAACTTGGACGAGTTTTTTGCCCATGAGAACACAGCTTTTCCACCATCG
CTATCAAAGAACGGAAATTTAAGATCTGGAAATAAAGCTGATTTAACGAC
ATGTTTGCGTAAAGTGGTGACGGAAACTGGTCCACAAAAAGTTGATACTG
ATTGCCTCATCCTTGATGGTGCAGCTATTGTTAACATCTTGAAACCGACT
AGAGCTTCGACATTTCACGAATACTCCAAAGAATTCACACAGTTCGTCAA
AAATCAAATCACTAGCGTCAATCGTCTCGATATTGTTTGGGACGTCTACA
TCGAGAAATCACTAAAACTTTCCGCCAGAACAAAGAGAGATGAATAAGTC
ATATCAAGAACACTGGTTCTCAACTAAAGTGCCACGGAATTTTGAAGATT
GGAAAAAGTCACAAGAAAAGGAATTCCCTCAATTCCGGTTTTGGTCGACA
ACACTCAAAATGGAATTGCTGTTACTAGAGTTTGTTCGGTCCATCAGGAG
TGCAGACTTTGCCCTCTATAAAGAGTCAATCAGCAAGCTGCTTCCATGGT
TTTTTGCGATGGATCATACAAACTATGCTCGTTGGCTATCGATTCATCTA
TACGATATGTTGGAGTTGCCCCAAACCAACCCGATAGTCAACGAGTATTT
TGAAGCTGGTCGATTTGTTATTACCAAAACAAAACGAAAATTCTCCTCTA
TCGGCATCGACCACGCCCATGAGCAAAACAACAAATGTGTCAAAGGAGAT
GGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045623XLOC_045623Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073509-proteinTCONS_00073509-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073509-exon-scaffold_93-1575043694:217851..218621TCONS_00073509-exon-scaffold_93-1575043694:217851..218621Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1575043694:217333..217694TCONS_00073509-exon-scaffold_93-1575043694:217333..217694Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1575043694:217119..217222TCONS_00073509-exon-scaffold_93-1575043694:217119..217222Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1575043694:216426..216989TCONS_00073509-exon-scaffold_93-1575043694:216426..216989Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1575043694:215390..216247TCONS_00073509-exon-scaffold_93-1575043694:215390..216247Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1575043694:214235..215231TCONS_00073509-exon-scaffold_93-1575043694:214235..215231Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1510915933:217851..218621TCONS_00073509-exon-scaffold_93-1510915933:217851..218621Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1510915933:217333..217694TCONS_00073509-exon-scaffold_93-1510915933:217333..217694Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1510915933:217119..217222TCONS_00073509-exon-scaffold_93-1510915933:217119..217222Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1510915933:216426..216989TCONS_00073509-exon-scaffold_93-1510915933:216426..216989Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1510915933:215390..216247TCONS_00073509-exon-scaffold_93-1510915933:215390..216247Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1510915933:214235..215231TCONS_00073509-exon-scaffold_93-1510915933:214235..215231Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1491911889:217851..218621TCONS_00073509-exon-scaffold_93-1491911889:217851..218621Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1491911889:217333..217694TCONS_00073509-exon-scaffold_93-1491911889:217333..217694Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1491911889:217119..217222TCONS_00073509-exon-scaffold_93-1491911889:217119..217222Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1491911889:216426..216989TCONS_00073509-exon-scaffold_93-1491911889:216426..216989Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1491911889:215390..216247TCONS_00073509-exon-scaffold_93-1491911889:215390..216247Clytia hemisphaericaexon
TCONS_00073509-exon-scaffold_93-1491911889:214235..215231TCONS_00073509-exon-scaffold_93-1491911889:214235..215231Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_93supercontigscaffold_93:214235..218621 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0514618 0 0.104882 0.10261 0.0832789 0.0548401 0.10586 0.0619403 0.0433658 0.0322294 0.0312826 0.0685465 0.0342256 0.0142175 0.0233774 0.0250875 0.00772643 0.023758 0 0 0.0696586 0.0582463 0.059005 0.18239 0.0773531 0.0788981 1.70766 1.20493 0.0342711 0.0465558
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073509 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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