TCONS_00073485 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073485
Unique NameTCONS_00073485
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3012

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073485 ID=TCONS_00073485|Name=TCONS_00073485|organism=Clytia hemisphaerica|type=transcript|length=3012bp
TAATATTACGTTTTGATAGGCCAATCAAAATGCTTCACAGGAATTCCGAG
AACTGAAAAAACTGTTATAGCTGAGATGGCGCCTTATAATTTCACATGTA
AACAATATGGCGGAAATTCCTAACTGGAAAACCACAGGAAGACAAAAAGC
AATTTGGGGATGATTCTTCGTGGATTTTGGAAGAGATGGACTCTGCTTTT
ATTCTTTGTTATCGTTCTAATCATATTGATTTTCCAGCTATCTCAGAATA
AGGAAACTACTCCTGCCACTGTCAACTCAAAATTTACATGGCTTCATTCT
TTTAATACTTCATCCCTCAAACACTGTCGAAATTCAAAGCAAGGACCAAA
CCTTATCACAGATGAAAAAGGGTATATATGTCGACTTCAAGATGTCCAAT
ATAATGGATGTTGTAATAAAAAGTCAAACTTCACAGAACAGTATTCTTGT
TTGAGTTGCCAAAACAACCGATGTTGTAAGGTTTATGAGAATTGCATCTC
ATGCTGCTTGCATCCGCATAAGAGAAAATTATTGGAGTTGGTATTACAGC
ATGCGCAAACAGTACACAATCCGTTGTTGAGCTCAGTGCAAGATAATTTC
GAATTGTGTTTACATAAATGTCGAACATCTTCAACGAGCATTCGACAAGA
CAACACTTACCGAAATCTTCTTTACAAGTATTGTTTCGGAATGGAATCAC
CTCATATAACGCATGGTCGAAACAGATGAATTCTGGGGTGGTGTGATGGA
ATTAAGGCTAAAGAAAAAGGGAGGAGCGGAGGCTTTAATTTGTATGCTGT
TGAGACCTGATTTTCACTTTGATGTGGGTGACTTGCACGATCGATCGAAA
TAACCAGCTTCGAATCAACGAATATGAAGAAACTAAatcaaattctgaaa
atcgtAAAGAAGCACGATAACACGGAAACCAACCATTTGAGGAGACTGGA
AGTTTCTTACTACGAATACAATCCGAATGTTTAAACTATTTATAACCACC
CGGCGAAGGAAACGATAGAGAGAACTATAAAATGTTCAACGAAACAACTT
TTTTCTGAGCTACTCTCCCGCTTTCAAACATTCTTTTGAAGCTATTTTCG
ACACTGTAGCGTTTAATAAGTGCAGCTCTGGAGGCTATACGGACATGGTT
ATTTAGAATTTGGATATTCTAGAATACATATAACATTACGCAATGTTAAG
TTGTTGGGAAAACAAGGAGGTGTGCAATTCAGGATGTCAACGAACATTCA
AGAAATTGGGTTGTTTTGCATTCCAAGAAGAAACCACTCCGAACCTGTTG
ATCACTGATCTGGTGGCCAATGAATTCACTTCTTCAGGGATACTTATTGA
CCAGTCCAAGGATCTAGAGGCTTCCATTTTGAGCTTATTATGCAGATGTC
TCACCAAAACTAAAGCCATGGGCTACACCATCTTTGGACTAACCAATCGT
GGTCAATGCCATGCTGGTAACCAGGAAACCAAACTAAACAAGCTTGCTAA
AGATGGTAGATTTGCTCCGCCTCTTGCATGTTCGAATACCAATAAAGGTT
TATGCAACGTTTTAAATGAAACGGAAAATTGTTTTGGCAAAGATATGCAT
TCATTTTATTATCAGGTCATGAAGACAGTCGATGGTCAATGGGGTTCTTG
GTCCCTCTTCACGAAATGTAATACGACGTGTGGAAAGGCTTTTAAAACGC
GTCAACGATCGTGTGACCAACCTAAACCTCTGTATGGGGGCAAGATGTGC
CAAGGGCCTTCTGTTGAAGTCCAAGAATGTCATTTGGGTGGATGTCCAAG
AGACGGTGGATATACAAGTTGGTCAACTTTCAGTTCATGCACTTTATCTT
GCGGTGGAGGTGTTCAAAGCAGAACACGTTCTTGCACTCAACCACCACCT
TTGAATGGAGGGAAGAAATGCTCTGGTCCTTCCAGTGAAACCAAGGCTTG
TAATACACAACCTTGCCCAGCACCTTGGACTTGCCAACAGAAAACTACGC
AATGGGATGTAGATGGAAATGGAGATGCTCGTTATTTCGATCGCCATCAA
TTGAAATGTCCTTCTGCAACCGCTATCAACCTCCTTCGTCTCGAACGAGA
TAGCACTCTCACCAAATATCGATTTGTATACAAGTGCTGTTCCATTGGAG
CGACAGCATGCAACTCTACAAAATTGACACGCAACAGCTTTTCATATGAT
GGTACAGGGAGTGCGCGGTATTTAGATCGCCAATATGTCGAGTGTAACAA
GCATTTGATCTCTTCTTTACGTCTTGAAACCAATCTATTGAATTTCCAAG
GTGACAAAATTCGTTATGTCTACAACTGCTGTCAAGCACCCAATCAACAC
CGAACATGTTACTCGGCCATGACGAAATTCTCCGACGATGGAGGTGGCAG
TGCCATTTATCTTGATCGACAAAAGATCGAATGTAACCGAGAATTTTCGT
TGTCGGCATTTCGTCTGGTGAGGGATACAAACACAATGAAACATTGGAGT
TATAAATACACTTGTTGTAAAACAACACCTAAGTCTTTGGTCAAAACTGT
TGTTTAACACATCAATCCTCTATGATATTTTATAATACATATGAAGAAGT
AATTTTCTTGTTCTCATCTTGAACCTTTATAACTCGATTGTCTACTAATA
AACTTAACAAGTTTTCTATCTATTCCGGTTAGTTAACAAAAACTTATAAA
CCTTAATCCatgtttcgaattttcaatAACTCGAACATATTTCAcggttc
cccgtgcgtgttcgagttatgggaCTCAtctgtatttttttgtattctCT
TGAAATTTCTCTCGAAATTTCTCTCGAGTGCGCTTCCAgtaattcttcat
ttttctttccatATGATTTACTAAATTCTCATAACGAAAGACGATTGCAC
TGTATagttttttaagtttattttagGAACCTTAGAAAAATAGTCGAATA
TGATGACTCATAATGTAACTATTTTGATGATTTCCAAATGAATAATAAAT
TGTTCTAACCGT
Run BLAST on NCBI

transcript from alignment at scaffold_93:18913..33364+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073485 ID=TCONS_00073485|Name=TCONS_00073485|organism=Clytia hemisphaerica|type=transcript|length=14452bp|location=Sequence derived from alignment at scaffold_93:18913..33364+ (Clytia hemisphaerica)
TAATATTACGTTTTGATAGGCCAATCAAAATGCTTCACAGGAATTCCGAG
AACTGAAAAAACTGTTATAGCTGAGATGGCGCCTTATAATTTCACATGTA
AACAATATGGCGGAAATTCCTAACTGGAAAACCACAGGAAGACAAAAAGC
AATTTGGGGATGATTCTTCGTGGATTTTGGAAGAGATGGACTCTGCTTTT
ATTCTTTGTTATCGTTCTAATCATATTGATTTTCCAGCTATCTCAGAATA
AGGTAATTGTTTCTTTTAAAACAACTTGCTTGCTTGTGTGTTTTAAcctt
agttttttttttcattttatagctacactcttttcttttttatatatagA
ACCAGTACTACTTTTACCCTTTTACCCCTAACGACCCCTAAgttgcttga
aattttcagactcaGCATTGTTGTTaaaacttgttcttatttttttgaca
attttcagcCACTTTGGCTCTCTTGGGGGAGCTTAGTCTGTATGtaaact
tacaccacataagcaaaaatcccgcgagtatggtatttttgaccctgttt
gaatttgtttacatttggtttgaattttgtGCCAAAAAAGCTGTTGATAA
GGTTAGCAAATCAGGTTCGTGCACTTCCAATTGAAACAACATATCACGTG
ATTTCAGCAAatgtttaacagccaatagaattctgcgaaAAGAttatttg
gcatctacaaaaatacccagCTAACTCTTTTAACGACCCTGGACACTGCC
GTACATTGCACGGTGGAGTCCGGTGGGCGTCCGATGGGTGTACGGTGGTA
TTTTAGGTTAGATCGAAAACACCGTACAACCCCACCGTACAGAATCCCAC
CGTACACGGAATTGCCACCGTACGATTGTCCGGtggatgtatgcatgctc
acaAGGGTGTTGTGGTCAGTCGGAGTCAAGGAAAAATTTGTAATCTTTCC
GAAAAATAATTTAGTTTGTGTGAGCACAGAACGCTAGTTCTATATCTCAA
AAGAAGAAGCatgtgttttgaaaaagttcgaaacaaacaAAGCTGTGGTG
AAAATATCTGGCGTCTAATCAGTAGACGTCGAAAAGCCGATAGTTACGCT
GGGAATGAAGTTGATGAAATACTTTCCATTCGCTCGGCTTTTGTTTCGAC
ATTCGaggagtttttcttttagtttttgaCNTTTTGTTTCGACATTCGag
gagtttttcttttagtttttcttttagtttttgatCGTTCGGCGATTGAG
GGAATCAGAGAAAACACGCACCTAGTCCGCCCTTATTCCGCCTAAGGTGT
ATACAAGAAGGCCGCCTGACATATTTTGTACGGTGGGAATTCAGAAACCT
GATCGACTTCccaccgtacaatgtacggcggtATATTTCGTGTACANGGC
TTAACTTTAGTTTTTTTAGTATACCTTGCTTATTGGTAttaaaaatttcg
cgattcgctATTTTTTTTCGAGGAAATGTATTTTGTGTGTATTAATTTAG
CGATTGCcagtttttggaaatttttgcgTGTATTAGATTTCTTTGCAATT
TACTAAATTTGGCATTCTCAAAAAGCGGGaataaagcaagaaaatgactg
atttcgCTTGAAACTCAACGTATTAGGTGGAAACATaccaaaaatagtaa
caaaactagtgacaaaatagtacacaagtgtttcaaccggtattccaacg
aagccatattttggttggtACAGAAATTTCACCCGCTCAAAatccaaaac
aacaaaatggtcaatctcactaaagcaaaacattgcggccacggcatttc
cctggataaaaattctggtcacgtgaccatccgtgattttagaccaatga
aaacgcttcatatccccggattaaagttgtgtctacactaacacacggga
aatggctagaaaaagagagaaaaagagagaaaaaaccgggggtcaaatta
aatttttctcccttcttgcagCACATACAGTATGAAAggctttaagaggc
catttatttaagaataAGGGGTGTTacatcataaataaattatgtaagta
agtgatattttaagtaaaatgatcattaacaattttattttgaagtttgt
ttttaaaaacaaaacccccgtgctagatgatagtctcattttcttaactt
atggacccatttggaagtctttgtaatacagatcatttggcagtgtagtt
gcagcctacagtatacaagaattggaatctaaagtctgaagtcgtaactc
cttgccagtgaccctgcagagaaatttttagttggcagacactgacttta
ggttggtttggaaatcgttttattttgaaatgtaatcttcactttagatg
aatactttaatttatttggattcatgaaaggttcaaggtttgtttacttt
ttatttcaaattatctcattgaaaaacaaagatttttgatagctatcagc
gtgggcttggccgccattttgaatttcgatttcttTTCTTCTGTagtcgg
caatttagaggttgttcgtaatacgcgatttggcttacgcgtaacacttg
tgagTAATTAAGTGTTACAAAtaagtattttcaattttcggcctattttg
aaaatttttcgcgtgtatttaatttcacaatttttattttttttagattt
aaacagtattaaattttgcaaaatttgaccTAAAAAATTGCCATTACATA
CTAAATACCATTACAAATATggtatatatacgttttttgtttaatttttg
tttgggaGAATGTGACAACCTATTATTGTCTCAGTTCTGCATATTAAATA
GCTCCATCCATTCAGGCCAGAAATTATCCGCTCCGTATTAAGGAAACGAA
ACCCTAATACTGCGCAGGAAGATTCACAGTATTATGTATTGCATGCTGCT
AATTTGGGAGAATGCTAGAGTGCcaattttgaacaaaacttattTATAGG
TAATGTCTAATTTCCCGCTTGTTTTAATTGACATCCACTGAAGTGTGGAG
TAATTATACTTAAGCCAGTATACATGGATTCTGTGAAAATGTACTCATTT
GAGTGTACTTATTTTTTGAATGGTTCTTCTAGACCTTTCCCTATTTAAGA
TATTatgttgaatatttttcaattttaatttcaatttcaatatcttttat
aatagaaataataataacaaagctttacaggtttgcaggccacaGTGagg
acacatgggcctctataaaccgcttgtactttttacaataatctttttga
aatagagtttttttcgcgggctcccccggactttccattttgtgttgtct
cctttgattttagcatttttttcggcttccttacaccattctttgattat
ttgtctttcatttttggtcaaatcctctgtcactcggtaaggaaagcctt
ttgcttttgttattgcttgcaacactgtgttcgtgtcctcttcgttcgta
aatttgactttgattggtcggtatctcgctttatcttctctttctttcgt
aaatttcccAATCCACTGCGTCTCAGTAGTCTTTATATTCCTCAGACAGA
GCCGCCaaccaataattttgtcatggatAAATTCTACATCCTTGATTTTC
GTTTCTTCTTCAGATTCATCTGTTGATTCATCTATCCCATGAAAAATAAG
GTTGCATGCTGTCGATCGAATCAGCTGCTCCTCCtgcttttctttttgaa
ttgcatctccaatgtttttctcgatgtgtttgaatgtgattttagcgtag
ctcattggtggtcttccctcttctttcttttcgatgatgTTTTCAATCTT
CTTCTCAAGCGTGGTTTTTCTGGTGTcgatagtttctttcatttcgttga
ccataacattgacgtcttgtgctttcaaatggtttatttcttcgtcctgc
ttttcattatattctcacaggctttaatttcgtttttgaattctttaatt
tttaatgtttcatttgaattatacctttccattacctgtggtgtgatttt
ggtacagttttgACACTGGAAACTTCTTGATTTGTATGACAAGCATATCT
GGATTTGGTAAAGTGGCAGTTCTGTACAAAGATAATGGACTAAGCGGTGG
CACTTCCTGTATTGTAGGGTATCTTTTGGtgcgttttcttcatttatgat
gcactttgacgggctgcaaaagtcgtttattgatggtgatttttgatttt
tttcctggatttttttccgccatctttgtgcatttttcagacGACAACCG
TTCAGTTTTGTATTTGACGTCAGAATGAATATATTAGTTAAGTTAAGTTA
AGAATAGGATGGAAGATACAAGCCCATGAATAAAAATATCCCCAGAATGT
ACCAAAATGACTTTTCAGagatgttttaaaaatatatttttttgcgacat
ctttgtcaattttaggaatttttggaCCTTATTTCATAAATGACATATTT
TTCCCTGATGATTCCAATGATATAGGTTTCGGGAGTAATTTGGGATGAAA
TATTCCAGAAAATCAAGATTTGCAGATTCTTTAAAAtggttttattttat
taaattttcaaatttgaatttcaaagagTAGAAAAGTATGAagaattcca
aaatttttgattttgggtGACATTAAAAGTGGAATATTTCATCCTATCCA
CTCTTTCGGTGAATATATTGCTATTTTCTGAAAGATACACTCTTTACTAT
TACACTTATGTAATTTTCATCCTTAAAATAATATCCAttagtttttaaaa
catttttttggacaacccgttttttatcaatatttttggaatatctcatC
CTTTTCTACTCCTTTCATCATTTTGCTTACATTTTCTAATAATTTATATG
GTACACTATCTGAGAGTATAATTTCAAAAGGGAATCTTTTATAGATAAGG
AGTAATTAACTGTGGAATTTCTCATCCATCCGCAAATAAGAAAGCTCTCA
TCCTAGATTACTCCTAATTTTGTCCTTAAATTGTAGCTGTTCAACTCAAC
CAATTAAAGCCGgattaaaaaaatcgaaatatttcatcatatctcttttt
ctcaaaataaattgaaatactCATGTAAAAGTTTTCATTAAGAAAGGTTG
TCTTAAATAGGAGATACCCAAAAAAGACAATTTGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNta
agaaacaaatgactaattttaatagatcgtcaatatttgtgttctgaatg
attgtttaatggtcacgtcacgtagatatcaattataaatgtgttaaatg
catatccaggtaggtccataaaagtatcacttgttttgtcCTTAAATTGT
AGCTGTTCAACTCATCCGATTAAAGCcagactgaaaaaatctttttctct
aaataaattgaaatactCATGTAAAAGCTTTCATTAAGAAAGGATATCTT
AAACAGGAGTTACCCAAAAAAGACAATTTAGTACattctaaaaaaacatt
tatctaGACCAGTTATCCCACAACAcaactaggagaaaaaaaaagcataa
aatgataTGAAGtattttatcaataaaagtaaaaaactaaaaatagtATG
TGGGGAAAATAAGTTAAGCAAAATTTGTATATAAATCAGAAAACTATAAT
AATTATTACTCAGTTTTTAAATCTTTCTTCAAATGAGTAGAGAAAGCAGA
AGGAGTACAATCATCTAATTTATAATGATTCCTATAGTTCCAGAACTGAG
GTCCATGGAACATTCATAGTGGGCAGAGAGCTTGATCAAAGTTAAAAGTG
gcaacattgtttttataattttttctagcgATCATACAAAGTTCATAGCA
TAATTTACAGCCTGTAGACCAGAAAAGTCAGCTTTTTGGTGCCGATAAAA
GTTATCCCTCacttataaaaaagtaaacatgAATAAATGAGTGAAGTTTA
GAAAAGTTATAGGTAGAACGATCAACTGCTTAACATCATCGACTTCTTTC
TTTAGGAAACTACTCCTGCCACTGTCAACTCAAAATTTACATGGCTTCAT
TCTTTTAATACTTCATCCCTCAAACACTGTCGAAATTCAAAGCAAGGACC
AAACCTTATCACAGATGAAAAAGGTAATAATAGAATTTCTTTAATACTCT
CACAATGACAACAATGATCTTATTTTGCTTTTTCAGCTATTCgggttttt
tatttatttgattaccTGTTAAAATAATGAAAGCTGAATTTCACaataaa
agatagtatttttttacttaatttattagttttttaatcaaattcttcaa
tttttgacCTAAATACACGGTAATGTGATTTCCAAGTATTCCAAGGGTCA
AGTGAATTCGAAACAACGAAAAACAATTTATTTATCCATATGGGTATATA
TATATCAGGTCCTGATTCCACTTCCTAATGGACACCATCAGTAGTGCAGC
ATATTAACAATTTATGCTCTCattatttgttcttttttctGCAGGGTATA
TATGTCGACTTCAAGATGTCCAATATAATGGATGTTGTAATAAAAAGTCA
AACTTCACAGAACAGTATTCTTGTTTGAGTTGCCAAAACAACCGATGTTG
TAAGGTTTATGAGAATTGCATCTCATGCTGCTTGCATCCGCATAAGGTAT
AGAAAATAACTTTAACCTTATTTCGGTGTTTAATAAGTATCTTGATGAAa
cagtaccttaagggaagaaattttcgtgaAACAagtttttgcggaattta
attttgcggtttttgaCAATTCCGCAAAACACGAATATTCTcgagattta
aaaaatcacctccaaaagttgttttttagggcaaaatagaccatattcta
aataaaaaattctcttaaccgagaaattaaattccgtgaaactgccgaat
tttgagctgtgagtAGCGAAATTagattccgcgaaaatttcttccctcaa
gGTACCGTATTGAACAATTTGAATAAGTTGGTATTAATAGCATTACAATC
TCCAATCTACGGTCAATTATAATCAAAACTAGCCGTATGCacagcgtcgc
acgctgcgtgtcccaatccagtgaATTACTACACATCTAAAAAAATCTAA
CGAAAGAAAGATAGGCGCCGattgatgatttgattttgattataggaaat
aaaggagaaaaaagataacattgcattgcaatttttaaccacaattaaat
aaatagcttagcaaaagtatattttagatCTTCTTAACCATCGTGGCTAG
ACATCGTGGTTAGACATTtaagggtgactttgaaagacttgaaAAGTtgt
gaaagtgatagggagccgctattgtaaacagaaagttttaaaacgCATCT
GAATAAGcattctttaaaatgacaaaaagttttgggaagaaggttgattt
taacccatcaagctccaaactttgtgaatagaaaatagtatcttggggtc
tcaaagttagtctagtggtaggaaatctgcttaaggtgcaaagagatgat
ggttcaacgccatgaagagaaggctttgtagagctttgttagattttcga
aaactttttacaaaacgttgtaaacacacacgtttaagtgtattaatata
tagattagagagacaatttcaaagtgaaagtttgaaagacaCTCTTGCTA
TACCCTTGAATGAAATAACTAATTTTACGCAAGCGGCTTACTGGTTCAAA
AGAAtgcacattcttcaaaaagaccAAAGTTCAAACCGGGACGAAGTATt
atataaaaatcttttaaaaagttttgaaagtgatagggagccgctattgt
aaacagaaagttttaaagagcatctgaataagcattctttaaaatgacaa
aaagttttgggaagcaggttgattttaacccatcaagctccaaactttgt
gaatagaaaatagtattttggggtctcaaagttagtctagtggtaggaaa
tctgcttaaggtgcaaagagatgatggttcaacgccatgaagaggaggct
ttgtagaactttgttagattttcgaaaactttttacaaaacgttgtgaAC
ACACacatttaagcgtattaatatatagattgatACTTTTAAACAAGGAA
CTTGTTTTAAACTACACATAGAAATATGAGGAATGTCGCTGAAGACTGCA
AAAGAAAcaactttaaaataatttaagtTCATATTGAAACTTATTCTATC
AATTTCTTTTGACAGAGAAAATTATTGGAGTTGGTATTACAGCATGCGCA
AACAGTACACAATCCGTTGTTGAGCTCAGTGCAAGATAATTTCGAATTGT
GTTTACATAAATGTCGAACATCTTCAACGGTAAGTAGTATAATTTGTTTC
AATAACTTATGTCTTGATCAAGTGTCAACTTTGATTTCTAGAGCCATGTT
GCTCTAAAGCAGTTCAGTGCCCTCCTCTTATTGTAACAGCATAAATTTAA
GTGAGAGAGGAAGTTAATCCCTAGTAAAACACCCTTcccacagacccagt
aggattttttaagccagtggggtaaaaataacggactgaaactcgatggg
gattgatattaccatattttttatggctggggatttaaattccattgttt
taaaTTTAGTGGAGATGTGGAAAATACCACCATTTACTATTTTGgttgat
tggtttatttgattattttcagtggggacaaaaatttgagaacaatTTTC
CGCTAAGTACGATAATTTAGCCATTTTTCTTctgtgggaaggggtcccat
aGGGTCTGTTAGAAGAGGGCGTATAGTAAAATCtatgaaatattttgatt
tacttcgtaaaaaaaatataaaatccaGTGCACTAAGGATTTTACATTGG
TATGATATGAACGGTATGTCTTTTTTGTGACACCTTTAATCTACCATTTA
CAGAGCATTCGACAAGACAACACTTACCGAAATCTTCTTTACAAGTATTG
TTTCGGAATGGAATCACCTCATATAACGCATGGTCGAAACAGATGAATTC
TGGGGTGGTGTGATGGAATTAAGGCTAAAGAAAAAGGGAGGAGCGGAGGC
TTTAATTTGTATGCTGTTGAGACCTGATTTTCACTTTGATGTGGGTGACT
TGCACGATCGATCGAAATAACCAGCTTCGAATCAACGAATATGAAGAAAC
TAAatcaaattctgaaaatcgtAAAGAAGCACGATAACACGGAAACCAAC
CATTTGAGGAGACTGGAAGTTTCTTACTACGAATACAATCCGAATGTTTA
AACTATTTATAACCACCCGGCGAAGGAAACGATAGAGAGAACTATAAAAT
GTTCAACGAAACAACTTTTTTCTGAGCTACTCTCCCGCTTTCAAACATTC
TTTTGAAGCTATTTTCGACACTGTAGCGTTTAATAAGTGCAGCTCTGGAG
GCTATACGGACATGGTTATTTAGAATTTGGATATTCTAGAATACATATAA
CATTACGCAATGTTAAGTTGTTGGGAAAACAAGGAGGGTAAACAAtgagt
caactctctctaattcgaacctctattattcgaatctttctctaattcga
actaaaacatcgGTCTCCTCAGCTGGGGAGTGGTATGAATTTCTCTCTGT
Aatccgaatctttctctaattcaaagaaaatcgttggtcccttgaagatc
gaattagagagagagtcgGTTGTATCAAGCTCTGctggaaaaagggaaaa
ttccgCTTACGGATATTGCCAAGGAAAGTCACAACGAACTGTTTTCATGA
GAACATTTTATCCTTTATTGATGCGATTCAATTTTTATGCAAGGTTTCAC
CTCTTTCTGGGTTGATAATATGTAtggaaaaaattttgatggttaaaaaa
aacaagatattTTGAGCATTAGACATTGGCGTTCGAAAAGAAATAGCTCC
AACAATACTGTTTTATGTTTACAAATTCTTGACTTCAAATGACGAACGAC
CCATTTGAGATGTTTTTTTAATCCATTCGTCCAAAgatattttgactttt
cacAAGTACATTACATCTTGAGGCGGTTTTGTAAAATGATAACCTAATCC
CTTTAAGAATTGTTTTGAATCAAAATACAGTTCTGTTTGCATCAAAGTCA
ATTAGCCTAAAAATACTATTTGAACTACTCTTTTAGTTGCGCAACTCTGT
TATTTAGATTCAGTTTGGTATTAGCTGGACAGGCCAAAGGATGGCTTATT
TTTCTTTAGGGatcttatttttgttaattcCATTTGTCGCAGCTTCAGGT
AAAAGTTAAATTCCACTTATTAAATTCCGAACTTTTGGTATGTTTTTTCT
TACTCTTGTTTATTTacgaaaatgtttttattttcaaattttcaggcccg
gcggaagcggggagactggagATTTCAGTCTCCCCACTCTTGAGCAAAAT
GAggttttttctcaaattcctagcgaattttatcgCATTTTTAGCCTTCA
ACCTCCTCACTTTTATTGTTGTTCCGCAGGGCCTGattttcatatttatt
ttttccctgtAGTCTTCAGAAAATATTTAAACCGTTGCTAATACCGTTTG
TTTTAtagtttcttttcaaaatttgtattcAAATCACCGGTTCAatacat
tttttctttattcgATCATCAGTGTGCAATTCAGGATGTCAACGAACATT
CAAGAAATTGGGTTGTTTTGCATTCCAAGAAGAAACCACTCCGAACCTGT
TGATCACTGATCTGGTGGCCAATGAATTCACTTCTTCAGGGATACTTATT
GACCAGTCCAAGGATCTAGAGGCTTCCATTTTGAGGTAAAGATAAGATGC
TACATCTTATAAAATACTGAATTGTTAGATTTAGCTTATTTTTAGCTATT
TGTGATTTAGTCCATTTCGGTTAATGTTCACAGGTTTTTTGATATCATTG
TCATTTTCCCGTTTTCCTTTTAGCTTATTATGCAGATGTCTCACCAAAAC
TAAAGCCATGGGCTACACCATCTTTGGACTAACCAATCGTGGTCAATGCC
ATGCTGGTAACCAGGAAACCAAACTAAACAAGCTTGCTAAAGATGGTAGA
TTTGCTCCGCCTCTTGCATGTTCGAATACCAATAAAGGTTTATGCAACGT
TTTAAATGAAACGGAAAATTGTTTTGGCAAAGATATGCATTCATTTTATT
ATCAGGTCATGAAGACAGGTAACTTTTACCCCtgtacctttttttcattt
gaacTATGTTAATCACTACTATATAGTTTTCTAAGAATGTAATATTGTTG
AATTATTGCGTTTGTCCAAAAATAAGTCAAAAGGATGGTGTATTCTTAAT
GACTCatgaccactgacctttatataccctggacaaagcttctcaatccc
agccaagcaaaatctttgatcggtgttttttcaaaattggtaccctaatg
tcgacactactcgatagcggtgtaaatgcattgagagcgctaggtctact
tttcctcaaattcttttgatgatgtagcggcgttagacgttaatttttag
cattgcaatggcttctccttgggtaccaattctaaaaaaactccaatcaa
agatggcagatattgcttggtccagggttatataaaggtcagtgctcaTG
ACTGAAAGGTTTGGGTGACGTCTTATCTTCAAGCAGATTCTGCGGCGCAA
TGCACTTATCCACTCTAAAGGCCATagctccgtaagagaatctcCCAAGG
TTGGCGCACCGCTTTGAACTTTTTGATCCAGTTTTGGGATAAATACTtaa
aatgagcttttgagccAAAAACACGTCAATTATTAACagaaacattagaa
cccagtcgctttcggTTTCGTGTTTAAGTAAAAAGCGACTATTGAATGTT
TTTGCTGAACAACTCAGGTCAGATCATCACAATCGCCATATTCCTTTAAA
GCTGAGCGCGGTATGCGCCGATTGAacgatctgttatgagattagaGGGG
TAACGCCCAACTCTTTTGTTAAACTTCagacaagaaataaaaagtGTGAT
TTGATACCTTTAAAACATTCCAAAACTTATTGATGTCGCTAAAAGATAAA
CCTTGCCGAAAGAAAGCTTCCCAAATATCCTTCAGTAGTAAAGTCTCATT
TTATACATTTTCTTTACAGTCGATGGTCAATGGGGTTCTTGGTCCCTCTT
CACGAAATGTAATACGACGTGTGGAAAGGCTTTTAAAACGCGTCAACGAT
CGTGTGACCAACCTAAACCTCTGTATGGGGGCAAGATGTGCCAAGGGCCT
TCTGTTGAAGTCCAAGAATGTCATTTGGGTGGATGTCCAAGTAAGTTAAT
ACCGAATATAGCTCAGTGGGAGTTTAATAAATGGAGAATAAATGAACGGG
TTGAATGACTACGAGAATATAAACCACCGGTCTGAGTCAGAATTTCAAAT
TCTACTcttcataactcaaaattttagtGTCTTCCAGTGTTTTTGGTGGT
TCTCAACTTTTTAACCGTAGGCTAAGCTGCTTTGCTGTAAAAAATCTCTT
CGTCAaagtttcgcgattttcgccTCATTGCCTCATCCATTGCTTCGAGA
AGCTATTTTCATATTCCAGCAATTGATTGTAATTGTTAATAGGTAGGGGG
TTGATCTGCGCAAAGGTGGTTAGTATTCTTTAAATTTGCACTCTTTAACA
CTTTATCATTCTTTCCAGGAGACGGTGGATATACAAGTTGGTCAACTTTC
AGTTCATGCACTTTATCTTGCGGTGGAGGTGTTCAAAGCAGAACACGTTC
TTGCACTCAACCACCACCTTTGAATGGAGGGAAGAAATGCTCTGGTCCTT
CCAGTGAAACCAAGGCTTGTAATACACAACCTTGCCCAGGTATTTCTACA
TaatattttttcagttttaattccgatcaaatttgaaatctgTGTTGTAT
AAAATGTATGAAAAGATTCTATCAATTTACAACATTTATCCAAGCCAAAT
TCTTTCTATTTTATGCTAGTGGTTTCGTACCAGAAAGCCTTTAGGacaaa
actttggaaaatctttttacCTAAAAAGCACATAAAGGTTTTTTGGAAAG
CTGTGCCTTAAGCGTCAAATATTCTCCCTGTACTACACTGCAACTTATCA
AACTTTTTAGCACCTTGGACTTGCCAACAGAAAACTACGCAATGGGATGT
AGATGGAAATGGAGATGCTCGTTATTTCGATCGCCATCAATTGAAATGTC
CTTCTGCAACCGCTATCAACCTCCTTCGTCTCGAACGAGATAGCACTCTC
ACCAAATATCGATTTGTATACAAGTGCTGTTCCATTGGAGCGACAGCATG
CAACTCTACAAAATTGACACGCAACAGCTTTTCATATGATGGTACAGGGA
GTGCGCGGTATTTAGATCGCCAATATGTCGAGTGTAACAAGCATTTGATC
TCTTCTTTACGTCTTGAAACCAATCTATTGAATTTCCAAGGTGACAAAAT
TCGTTATGTCTACAACTGCTGTCAAGCACCCAATCAACACCGAACATGTT
ACTCGGCCATGACGAAATTCTCCGACGATGGAGGTGGCAGTGCCATTTAT
CTTGATCGACAAAAGATCGAATGTAACCGAGAATTTTCGTTGTCGGCATT
TCGTCTGGTGAGGGATACAAACACAATGAAACATTGGAGTTATAAATACA
CTTGTTGTAAAACAACACCTAAGTCTTTGGTCAAAACTGTTGTTTAACAC
ATCAATCCTCTATGATATTTTATAATACATATGAAGAAGTAATTTTCTTG
TTCTCATCTTGAACCTTTATAACTCGATTGTCTACTAATAAACTTAACAA
GTTTTCTATCTATTCCGGTTAGTTAACAAAAACTTATAAACCTTAATCCa
tgtttcgaattttcaatAACTCGAACATATTTCAcggttccccgtgcgtg
ttcgagttatgggaCTCAtctgtatttttttgtattctCTTGAAATTTCT
CTCGAAATTTCTCTCGAGTGCGCTTCCAgtaattcttcatttttctttcc
atATGATTTACTAAATTCTCATAACGAAAGACGATTGCACTGTATagttt
tttaagtttattttagGAACCTTAGAAAAATAGTCGAATATGATGACTCA
TAATGTAACTATTTTGATGATTTCCAAATGAATAATAAATTGTTCTAACC
GT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045611XLOC_045611Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073485-exon-scaffold_93-1491911889:18913..19164TCONS_00073485-exon-scaffold_93-1491911889:18913..19164Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1510915933:18913..19164TCONS_00073485-exon-scaffold_93-1510915933:18913..19164Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1575043694:18913..19164TCONS_00073485-exon-scaffold_93-1575043694:18913..19164Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1491911889:25218..25335TCONS_00073485-exon-scaffold_93-1491911889:25218..25335Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1510915933:25218..25335TCONS_00073485-exon-scaffold_93-1510915933:25218..25335Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1575043694:25218..25335TCONS_00073485-exon-scaffold_93-1575043694:25218..25335Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1491911889:25707..25858TCONS_00073485-exon-scaffold_93-1491911889:25707..25858Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1510915933:25707..25858TCONS_00073485-exon-scaffold_93-1510915933:25707..25858Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1575043694:25707..25858TCONS_00073485-exon-scaffold_93-1575043694:25707..25858Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1491911889:27428..27541TCONS_00073485-exon-scaffold_93-1491911889:27428..27541Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1510915933:27428..27541TCONS_00073485-exon-scaffold_93-1510915933:27428..27541Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1575043694:27428..27541TCONS_00073485-exon-scaffold_93-1575043694:27428..27541Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1491911889:28116..28699TCONS_00073485-exon-scaffold_93-1491911889:28116..28699Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1510915933:28116..28699TCONS_00073485-exon-scaffold_93-1510915933:28116..28699Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1575043694:28116..28699TCONS_00073485-exon-scaffold_93-1575043694:28116..28699Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1491911889:29835..29997TCONS_00073485-exon-scaffold_93-1491911889:29835..29997Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1510915933:29835..29997TCONS_00073485-exon-scaffold_93-1510915933:29835..29997Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1575043694:29835..29997TCONS_00073485-exon-scaffold_93-1575043694:29835..29997Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1491911889:30136..30380TCONS_00073485-exon-scaffold_93-1491911889:30136..30380Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1510915933:30136..30380TCONS_00073485-exon-scaffold_93-1510915933:30136..30380Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1575043694:30136..30380TCONS_00073485-exon-scaffold_93-1575043694:30136..30380Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1491911889:31332..31502TCONS_00073485-exon-scaffold_93-1491911889:31332..31502Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1510915933:31332..31502TCONS_00073485-exon-scaffold_93-1510915933:31332..31502Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1575043694:31332..31502TCONS_00073485-exon-scaffold_93-1575043694:31332..31502Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1491911889:31881..32051TCONS_00073485-exon-scaffold_93-1491911889:31881..32051Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1510915933:31881..32051TCONS_00073485-exon-scaffold_93-1510915933:31881..32051Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1575043694:31881..32051TCONS_00073485-exon-scaffold_93-1575043694:31881..32051Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1491911889:32323..33364TCONS_00073485-exon-scaffold_93-1491911889:32323..33364Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1510915933:32323..33364TCONS_00073485-exon-scaffold_93-1510915933:32323..33364Clytia hemisphaericaexon
TCONS_00073485-exon-scaffold_93-1575043694:32323..33364TCONS_00073485-exon-scaffold_93-1575043694:32323..33364Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_93supercontigscaffold_93:18913..33364 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.32099	2.43085	0.455146	0.756011	2.10147	1.94905	2.88893	3.33204	3.73844	3.27171	3.68628	6.01486	15.368	13.6911	6.42737	6.6069	3.39787	3.48945	12.4292	9.05139	2.83287	4.25793	4.77087	5.41782	5.11233	4.36948	1.42206	3.19156	7.53386	6.75318
Blast
[Close]
BLAST of TCONS_00073485 vs. Swiss-Prot (Human)
Match: CL049 (UPF0454 protein C12orf49 OS=Homo sapiens GN=C12orf49 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.182e-36
Identity = 70/149 (46.98%), Postives = 89/149 (59.73%), Query Frame = 1 
Query:  274 NSKFTWLHSFNTSSLK----HCRNSKQGPNLITDEKGYICRLQDVQYNGCCNKKSNFTEQYSCLSCQNNRCCKVYENCISCCLHPHKRKLLELVLQHAQTVHNPLLSSVQDNFELCLHKCRTSSTSIRQDNTYRNLLYKYCFGMESPHI 708
            N    W   FN  +       CRNS QG +LITDE GY+C  +D+  NGCCN     T+QY C  C  N CC  YE C+SCCL P+K+ LLE  L  A      L  +V+D+FELCL KCRTSS S++ +NTYR+ + KYC+G   P +
Sbjct:   54 NQPIPWKVQFNLGNSSRPSNQCRNSIQGKHLITDELGYVCERKDLLVNGCCNVNVPSTKQYCCDGCWPNGCCSAYEYCVSCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTYRDPIAKYCYGESPPEL 202
The following BLAST results are available for this feature:
BLAST of TCONS_00073485 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CL0492.182e-3646.98UPF0454 protein C12orf49 OS=Homo sapiens GN=C12orf... [more]
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