TCONS_00073406 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073406
Unique NameTCONS_00073406
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1303

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073406 ID=TCONS_00073406|Name=TCONS_00073406|organism=Clytia hemisphaerica|type=transcript|length=1303bp
aaggtaTCGGCGTGGATGATGTCTTTGTCATTATTCAAAATTGGGACAAC
ATTGGTGGCCCTAAAAATCGTGACCGCTCGATCGCCGAAAATGTTTCTCT
CGCATTGAGAACTGCTGGCGTATCCATCCTGGTCACGTCAATCACGGACG
TTTGCGCTTTCTTGATCGGAGCAACTACAATCCTTCCCGCCTTACGATCG
TTCTGTATTTTCGCTGGCATTGGTGTTTTAGCCGTCTTCATTTTAACATG
TACATTTTATGTGGCTTGGTTGGCTTTGGATAGCAGGAGACAACGTGACC
ACCGTGACGCGTGTTGTTGTTGTGCGTCTTTACCGACGGATTGGCAACCG
TTGGAATGTTCAAAGAGAATGTACCTTCAAGAGTTCATGAGAGGAACTTA
TTCAAAAGCAATTCTCTCTACGCCTGGTCGGATTGTTTTGATGTTGGTAT
GGGCTGGTTTATTAGCGGGAGGTGCATACGGTCTTTCACAATTGAAACAA
GATTTCGATCCTGAATGGTTTTTACCGGAAGATTCGAACGCCAGGATTTA
CAGCTCCGTGGATGATAAGTATTTCTCGAATGATGGTATCCAAGCCTATG
CGTACATTGAAGATGTTGactattttgcagaccaggaCAAGTTAGTGAGC
ATGTATAACACACTGGAGAATAACCAGTACACTGTTAAGGGAGAAACTCA
GAGTTGGTATCAAACCTATATCGCATGGATGGCAGCCAATCACGCCGCTG
ATTTGACCAACGGTAAACCAAGTACGAAAGATATATTTTACAATCGATTA
GATGAGTTTACGAAAACACAAGTTGGGAAAGTTTTCGAGAAGGAGATCAA
AGGAAACATAACGGAACAAAAGATTGAGGCTTCTCGTATCAAATACAAAC
ATATCAAATTGGAAGGCGCTTCGGTTGAAGTCAAGGCAATGGACAGTGTG
CAAGATGAGCTTGCCAAAATCACATTCACTAATGACTTCAGTCCTTTCGG
TTACACAAGGTTCTACGTTGGCTGGGAAACAAATAAGGTCATTTCTGAAG
AATTGATACGTAATTTGTTGTTGGCTGGTGTTATTGTGTTCTTGGTGACA
TTGTTCTTGATCGCCAACGTCTGGGTCTCCTTACTCGTCCTCACATGTGT
TGTCTTCACTCTGATCAACATTGCGGGTTACATGCATTTCTGGGGATTGA
CGGTTGATACGGTGACCACTATCCAGTTGATTCTGGCTATCGGTCTGTCA
GTCGATTATTCCGCTCATATCGGGCATGGTTTCATGGCTGCACGCGAAGG
AAA
Run BLAST on NCBI

transcript from alignment at scaffold_91:326960..339604-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073406 ID=TCONS_00073406|Name=TCONS_00073406|organism=Clytia hemisphaerica|type=transcript|length=12645bp|location=Sequence derived from alignment at scaffold_91:326960..339604- (Clytia hemisphaerica)
AAGGTATCGGCGTGGATGATGTCTTTGTCATTATTCAAAATTGGGACAAC
ATTGGTGGCCCTAAAAATCGTGACCGCTCGATCGCCGAAAATGTTTCTCT
CGCATTGAGAACTGCTGTAAGAACATTACAATTACATGTTAATTTTTTCC
TACATTAACAACATTAACAATTTCCAATTAACACACACTCGCTCGAAAAG
GAGGAAACTTCTAATTAGCGGACAGTTTCATTTTCTCCGGCCGTTTGAGT
CGAGTCGATATTTTACGTGGATAACCCAGTAATCTAGGACTTTTCGACAG
TCTTTCGATTGTTTCGATTTCGATTCACGGGGTCCACGGCCAACCGGCTC
GGCTATCTATGAACTGAACAGGACATTGAAAGGAGCGGGGATTCGAACCG
TGAATCCCTGGTTTGAGACGCTGATGCCTTTGACCACTTGGCCATCGTTC
CTTTCCTAGAAATACTTATAAAACAGTTGGCGGTCACTGACCTGTTTGCA
CGCCATGTGTCCATTAATTAGAAGTGTCACTCTATTCTTAAGAAAGGGGA
CCCCGCAAGAAAGGGCTCGAAGAACAGACTTTTTTTCAAATGGAATTTGC
AGATTTGACAAGATCTTGATACTTAGATCTATAGCTACACACAAGGTTTT
GCTATCAATTAAAACATTTTCTATTCCCTTAAGCGTCTTAGCTTTAAACC
TTTAAAAACTTAAGTCAAATTACACAAAAAGCGTTATTATTGCAAATGGA
AACATTAATCTAATAATTTAATTAACGACTACCTATTTTAGGGCGTATCC
ATCCTGGTCACGTCAATCACGGACGTTTGCGCTTTCTTGATCGGAGCAAC
TACAATCCTTCCCGCCTTACGATCGTTCTGTATTTTCGCTGGCATTGGTG
TTTTAGCCGTCTTCATTTTAACATGTACATTTTATGTGGCTTGGTTGGCT
TTGGATAGCAGGAGGTAAGGTTTCCTTAAAGGGACATAAAAGTACTGACG
AAATTTGTAAACAAACCGTATGCAGCGAGATACAAAATCAAAACAAATAT
CACATGTCAAAATAAAAATAAAAACAAATGTTACATGTCAAAATAAAAAA
TAAAGACAAATATGGCTGATTTTGATTGTTTCTTGAAATTATTGTTTTAC
AAGTTTGTTTTGAACACGTGATTTTAATTGTTCTCTTTTAATGACACATG
GTTCGCGCAATGCTTACATTTTACTACTCAGTGACTTGGACAAAATCCAA
TTTATTTCTTTAAACCTACCAAACCTGATAAGGTAATGAGATAGGAACTA
AATTATCCAGATGAGATGGAGTTTTTATAAGATACTTTAATAATTAGTCA
TTTGAAGTAATAGAAATGACGCGTTCTTTAGAAAAAGTAACAAAATTGTT
TTATTACTGGTTAGCGACCAACCAAATCAAATAAGAGCTTGTAAAAACTT
CATCTCGTCCGAATTACCTTCTCAACCTAAATTTTTTTTCTTTATCGAAA
CATAAAAGACTGGGTCCTTCTCTCCGCGGCATTTGATAACCATCCAATCT
TTACAGCTCAAAATACTCCTAAAATGGTGCAAGTTTCATGTTTTCATGTT
TCAAATTTGAATAAGTATAAGCTTGTTCGCTTTATATTTGTAACCACTCC
CCACTAAACCTTGATACATTTTCGCCCAGCTAATTCTTTTGACCAATCAA
AATTGTTCTTTTAGACAACGTGACCACCGTGACGCGTGTTGTTGTTGTGC
GTCTTTACCGACGGATTGGCAACCGTTGGAATGTTCAAAGAGAATGTACC
TTCAAGAGTTCATGAGAGGAACTTATTCAAAAGCAATTCTCTCTACGCCT
GGTCGGGTAAGCTAATTTTCTATTTCTATTCGGTTGAGTTGATGAGGATG
CTCTGAGGCAACTGTTGATGCTTTCAAGAGTGTATCTCACGTTCGCTTCG
TAGTACACTCTATTCGCATTGTCTGTACAGAAACCTCTGCGATGAGGCTT
GATTTATACTTAGCAACTCTTATCTCGTCGTCTCCCCTCTCTCACCAACA
CTCCATCGCAGCGGTCGGTTTGAAAAATCTTAAATGAGAAAAGACAATGA
CAACAGACCCTCTACAGCATTGAATTTTGAAATAAGCCGTAGATACTGGG
TTTGTGTACAGACAATGAGCGCCCAATCAGCACCTTATACTGACAACCCG
ATTCCCCCGCCCCATGCCACGCCTGAGTGAAGGTTATAAAGTGAAGCGCT
GCTAGTGGGAATCGAACCATAGTCGCTTGTACAGCAACCAAGGTTAATAA
CTACCGTGGCTTGTTAGTGCCATGTGTAAGCTACTTATACTTATAGGTTC
TTGCTAAGTCGACTTAATAGGGCTAAGTTGTAAGTCAACTTATAAGTGCT
AAGTCGACATAGAACCTCTAAGTATAAGTAGTTTACACATGGCACTAACA
AGCCACGGTAAATAACCGCTTTGCCACAGCGCCTGTATACCATTTACGCT
CTTCCATAGTACAGTTACCGTCTTCGAAAGAATTATATGGGTGTAGACAC
TCTTGGTGCTTTTGAAGTTGTACCCCTTAGGCGTACAAACTTTCGCGAGC
AGAATTTTTTGCGAGCTCGAAAAATCGCGAAATTTACAATATTTGCTTTC
GCGAATTTGAGGAAAAAATGTTTTTCGCGAATAAACTTTCATATTTAGAA
GTTTTTTTACAAAATTTGGAGGATGTACCGTGTTTCAATCCCGACTTATG
GAAGATTTTGAAAATCGTTAAAAATTCATTTTCGGTATTAACCACCTGTC
ACTCTTTTGTCAATAACTTTTTTTGCCCAAGGTGTAAAAATTGACTCTAC
CTCACATCCGAAAGCTGATAAAATTATCTTTCCAACGGTGTATAGAAACC
TTCTATTCGTTTTTTTTCTAGGTTGACTCTATTTTCGACAAAGTTCTACA
GGACTAGAATCGTTGGTTAGAATGAGAATTTTCGAATGAAAAAGTGAAAA
ACATTCCTTAAATCCGATAAAGACGGTTGCTCTTCGACTTTAAAAAGGGA
TTTTAGGATAAGAAAATGCTAAAATTTTGATATTTATTACGATTTCGAGG
TTTTATAGAAACTTTCGCGAATTGCCCTGTTAAGAATTTTCAAAGACATT
TACTCTCGCGAAAAAGGCCAAAATTCGCGTAAAGTTTGTACGCCTAAAGT
GCTGTTTCAATCAGTTTTAAGGTTTCTTGCCAATGTGAGACTTTTCTTGA
CTCATGTGTTGGTTTTTTAAGCAATGAAATTAGTTGACAGCTTTATATCC
AACTTTCATTTTCAAATCGTATTAGTATACTGTTTTCAGGCTTATTCGCG
AAATTAAATCCACGCGAAAATTTTCAAACCCTGACTCTCGAAATAAACTC
CAGAAATACATGTCTGAGTTTCTGAACCCTCTTTTCCTTTCTGTTTAAGA
TTGTTTTGATGTTGGTATGGGCTGGTTTATTAGCGGGAGGTGCATACGGT
CTTTCACAATTGAAACAAGATTTCGATCCTGAATGGTTTTTACCGGAAGA
TTCGAACGCCAGGATTTACAGCTCCGTGGATGATAAGGTAAATGATAACC
CTGGGTTAGTATCTGGTGCATATATTTCTTATACTAGATGGAGCTTCTTC
TTTTATCTCTCTGGGTCAGGTTTCAGAGGTATCGGCCACTTTTTAATGTA
CTTTTTATGCACAGTAACTTCGTGTCATGCCGACATACCTTGTCTAATTC
CGTCATAGCAACTATCTGGTCTTTAAAAATGTTTATAAATAAAACATTTT
AAGTAAGCTGTTAAAAAATTCACTTTAATTACTTTGCAGACCAGATAGTT
GCTATGACGGAATTAGACAAGGTATGTCGACGTTAGACGAAGTGACGGTA
CTTTTTATGTAGTGATTTGCTGGTCAACCTGAAATGGGCAGTTCCAGAAA
AACCATTACCCCCCCCCCCCTGTGGACGACAGGGTTTTTTTGGATTCTTT
TTCACTTGGAAATCCTGAGAAATTTTGAAAAAGGTTACGGAAAAGGCACG
ATTTTCCTGATTATTTGGTCATCCGTATCGGAAAATCCTTAAAATTTGCT
CTATTTTCTTGTTAAGTATCGGAAAATCCAAGATTTAGAATTCCTTAAAA
ATTCTTTAAAAATTCTTGAATAGCATAAGTGAATTGTTACGGAAAATCCA
TGTCGTCCACATGGGGTAACGAACTATAACTGGAACCGCCCAATCAATTC
CAATAACGTTTCGTTTAATAGTATTTCTCGAATGATGGTATCCAAGCCTA
TGCGTACATTGAAGATGTTGACTATTTTGCAGACCAGGACAAGTTAGTGA
GCATGTATAACACACTGGAGAATAACCAGTACACTGTTAAGGGAGAAACT
CAGAGTTGGTATCAAACCTATATCGCATGGATGGCAGCCAATCACGCCGC
TGATTTGACCAACGGTTTGTTGTTGTACTTTTTGTTTTTCATTTGTGAGA
TTTTACTTAGGTGAGACTAATTTAATTTGTTGTTTTACGGGACAAGTAGC
AAGCACATCATCAAAAACCGAGATTATTCATCCCGTTTCTACACTGTAAC
GTCTGTTCCACTTTGCGACTTTTTCGAATGTTTTGAGCCCAGGTTTTCGG
GCTCTAAACATTCGATTTTTTGACGTCACTTTAAACGTTTGAAGCTCTTG
TAGTATCAAAAAATCGAATTTGCGTCAAAACACTTGAAAGGCTTCTTTTT
TTTCGAAAATCGTGAAAGTGGAACTCACTAACACTAAGAAACGGGATGAA
AAATCCCGGTTTTTGGTGAGGTGCTCTCTATAGTGAGTTCCACTTTGACG
ATTTTTCTCAAAACATACGAAAAAGTCGCAAAGTGGAATAGACGTTAATT
GTGTAGAAAAAGCGCGGGTGACGTCTAGTATAGTCTACGGGACAAGCTAC
CCAAAAAAGAGGGTCGGTCGGTCGGTCGGTCTGTCGGTCGGTCGGTCGGT
CGGTGAAAAAATAAGAATAAAATATACTTCCACTTTTAAATGAGAGTAAC
GCATCAATACCAACATCACATTTATTATGATGTCCTTTATCAAAATCTTG
ATTTATTTCTTTGTCTAGGTAAACCAAGTACGAAAGATATATTTTACAAT
CGATTAGATGAGTTTACGAAAACACAAGTTGGGAAAGTTTTCGAGAAGGA
GATCAAAGGAAACATAACGGAACAAAAGATTGAGGTTTGTATGATTACAC
GTTTTTTTATAAGGTACTTTAGCCCGGCTCCGAGCCTGGAGCTCCTCATT
AGCGACATTATGTATCAAAGATATTCTGCGGCTATGGTTGCGGGGCTGCC
CATGCGGGTCGTCACCAAAGGCGACATGTTGTTGTCTATTTTGCTCTGTA
CGGGAACAACACCAAAAAACCGTATAAGCAATAAGTCGACATAATGCCGT
ACGTCAAATATCGAACTTGCTTTCACCCGCCATTACTTGCCTCGCCGCTT
TAACTGTAGCCGTAGAGAATTCCAGATACATAATCTCTTTATTTTTCCAG
AGGGTTTAGCCTTAAAGTTCCCTATCGAGTTCCTTATTTACTTAGCTACT
TAGTTTAGACTGATATGATGCTTTGTTTAACAATGTTATACTACAATACA
TAAAAAAGACGTTTATTGAACGTTGTTTCGTCAATATTCTATAAATTTTT
TTGTTTAGGTTGTTGTAAATGAGTGCAAGTCTAAATCGTACTGTTCCTTA
ACTTGTCTTGTTATTCTCAGCCTGAATAATTCCTTAACAATTCCTTATTT
TTTGGACCATTTCCAGCCTCAAGTTCCTTATAAACGTGTTCCTTAAAAAA
AGATGTAGTGTCAAAAGCTAAAAATTGATCAAATCGATTAAGTAAAAAAG
TCATTATAAGGGTAATTCTTATTGAACTACTTTCTTAACCAAAAAGGGGG
GGTTTTATACTAACTGTTAACACCTTCTCTCCGGGCCCGGCGGGGTACTA
CCCTTGCCGACCGACGGGGGTGCTCCGCTGAGGTTCGAAAAATGGTCCCT
ACGTTGGACTCGTTTTTTCAAAAATTTTGCCCAAATTTGCGTAAAAAGTG
ACCCTGAATGGGGCTGAAATTCCAAAATTATCTCAAATTTTTTACTTTTT
CCCCAAATTTTCCAAAAAAGACACCCTACGAGGGACTGATTTTTCTATTT
TGAAGTTTTTGCGACCCTAACCGGGACTCGTGGAGGTTAAAAAAGGTACC
CTCACCAGCGGCGCATCCCCGTAACCCATTTTGCCCTAGTATCCCCCGGG
ACACCTCTCTTGGCACCCATAACGTGGTTCGTTTGGTTTGGTTTCGTTTA
CAGGCTTCTCGTATCAAATACAAACATATCAAATTGGAAGGCGCTTCGGT
TGAAGTCAAGGCAATGGACAGTGTGCAAGATGAGCTTGCCAAAATCACAT
TCACTAATGACTTCAGTCCTTTCGGTTACACAAGGTTCTACGTTGGCTGG
GAAACAAATAAGGTATTGTCTTATTTGGTTATTAGGTAATCATCATCGAG
TTTGAAAGCCCTGAAGGCTAAAACTCTTTGATGGGAAATTGGCTATTCGA
GAAAAAAAATTGTACCCCCTAAGTTGAGAAGGTCTTTTTCGGAAAGATGA
CCCCCTGGATTTTTTCAATTTTTCAGGACCCCCTGGATTTTTTTTCTCTC
ATTCTTTTTACCACCACTTTTCGACCTCGTCTTACTGAACACCTTGGATT
TTCTACCTCATTTTACTAACCACCCTGGATTTTTACACTCGAAAAACTAG
ACCCCTTTGATTTTTAATTTTACCGACCACCCTAGACTATTTCTGGAATA
GCCACTTATTTACCATATGAAACCTGTGACTCGCGTGGTTTTTGCACAAA
CGCCAAATTAAAAGGAAAATCCATTCACAGATTTTGAACACTATATGTCA
CTTCAAAATAAAAAGCGTTAGATTCAATCTCTCATTTTAAAAGCGGNAGG
TAATTCTTATTGAACTACTTTCTTAACCAAAAAGGGGGGGGTTCTATACT
AACTGTTAACACCTTCTCTCCGGGCCCGGCGGGGTACTACCCTTGCCGAC
CGACGGGGGTGCTCCGCTGAGGTTCGAAAAATTTTGCCCAAATTTGCGTA
AAAAGTGACCCTGAATGGGGCTGAAATTCCAAAATTTTATCAAATTTTTT
ACTTTTCCCCCAAATTTTCCAAAAAGGACACCCTACGAGGGACTGATTTT
TCTATTTTGAAGTTTTTGCGACCCTACCTGGGACTCGTGAAGGTTAAAAA
AGGTACCCTCACCAGCGGCGCATCCCCGTAACCCATTTTGCCCTAGTATC
CCCCGGGACACCTCTCTTGGCACTCCTTAACGTGGTTCGTTTGGTTTGGT
TTCGTTTACAGGCTTCTCGTATCAAATACAAACATATCAAATTGGAAGGC
GCTTCGGTTGAAGTCAAGGCAATGGACAGTGTGCAAGATGAGCTTGCCAA
AATCACATTCACTAATGACTTCAGTCCTTTCGGTTACACAAGGTTCTACG
TTGGCTGGGAAACAAATAAGGTATTGTCTTATTTGGTTATTAGGTAATCA
TCATCGAGTTTGAAAGCCCTGAAGGCTAAAACTCTTTGATGGGAAATTGG
CTATTCGAGAAAAAAAATTGTACCCCCTAAGTTGAGAAGGTCTTTTTCGG
AAAGATGACCCCCTGGATTTTTTCAATTTTTCAGGACCCCCTGGATTTTT
TTTCTCTCATTCTTTTTACCACCACTTTTCGACCTCGTCTTACTGAACAC
CTTGGATTTTCTACCTCATTTTACTAACCACCCTGGATTTTTACACTCGA
AAAACTAGACCCCCTTGATTTTTAATTTTACCGACCACCCTAGACTATTT
CTGGAATAGCCACTTATTTACCATATGAAACCTGTGACTCGTGTGGTTTT
TGCACAAACGCAAAATTAAAAGGAAAATCCATTCACAGATTTTGAACACT
ATATGTCACTTCAAAATAAAAAGCGTTAGATTCAATCTCTCATTTTAAAA
GCGGCGCAAATCTTATTAAGGCTTTAAACCCAATGATCGTCTTATAAAAA
TGTTTTAAAACCTTGCCTTTTATTTTGCCTCAAACAAAGAAATAAACTTG
CAAAAGTATACTTTAAGGAAAGAAATTTTAGCGGGAATTTAATCTGGCGT
GTAGTCGAAAAAGTTTTTTCAGAGGGAATTTAATTTTGACGGATGGTGGG
AAAAGTTAAAATATCGGCGTTAACTTAATTTGGCGGAATTTGGCCAAATT
TCACTTTCTTTCCACCAAAATTTCTTCCCTTAAGGTGAATAATAGTGCAA
TCTGGATGTGCCAAAAAGTCATTAAAACATTGTGCACAAAGGTGAATGGT
CCTGGAGTTTTTGCTGACGTCAACAATTACGTCATTTTTCAAAAAGCNTT
GAAAGCCCTGAAGGCTAAAACTCTTTGATGGGAAATTGGCTATTCGAGAA
AAAAAATTGTACCCCCTAAGTTGAGAAGGTCTTTTTCGGAAAGATGACCC
CCTGGATTTTTTCAATTTTTCAGGACCCCCTGGATTTTTTTTCTCTCATT
CTTTTTACCACCACTTTTCGACCTCGTCTTACTGAACACCTTGGATTTTC
TACCTCATTTTACTAACCACCCTGGATTTTTACACTCGAAAAACTAGACC
CCTTTGATTTTTAATTTTACCGACCACCCTAGACTATTTCTGGAATAGCC
ACTTATTTACCATATGAAACCTGTGACTCGCGTGGTTTTTGCACAAACGC
CAAATTAAAAGGAAAATCCATTCACAGATTTTGAACACTATATGTCACTT
CAAAATAAAAAGCGTTAGATTCAATCTCTCATTTTAAAAGCGGCGCAAAT
CTTATTAAGGCTTTAAACCCAATGATCTTCGTATAAAAATGTTTTGAAAC
CTTGCCTTTTATTTTGCCTCAAACAAAGAAATAAACTTGCAAAAGTATAC
TTTAAGGAAAGAAATTTTAGCGGGAATTTAATCTGGCGTGTAGTCGAAAA
AGTTTTTTCAGAGGGAATTTAATTTTGACGGATGGTGGGGAAAATTAAAA
TATCGGCGGGAACTTAATTTGGCGGAATTTGGCCAAATTTCACTTTCTTT
CCACCAAAATTTCTTCCCTTAAGGTGAATAAAAGTGCAATCTGAATGTGC
CAAAAAGTCATTAAAACATTGTGCACAAAGGTGAATGGTCCTGGAGTTTT
TGCTGACGTCAACAATTACGTCATTTTTCAAAAAGCCTTCCGCAATAACT
TTTATTGGCTTCATTTTCTGATGTAGGTAATGTATTTCTAAACGAGCATG
AAAAACGCTTTCCAACGGTGTGTAAAATGACATACTTTGGAGAAAAAAAT
CATTTTAGCCTGGGAACCTGTTCTGGTCTGTAAAATACACAAACAGGTGC
CAATTTTTCGGGTCTGAGATTTAAATCCATTTTTGACCCCTAAATTACAA
TTGTACAAAATCTCATGCTTGTACGCCTTTGTGCACAATTTTTACACAAC
TAGACCGTACTAAATTTTTTTCTTCTTTGACAGGTCATTTCTGAAGAATT
GATACGTAATTTGTTGTTGGCTGGTGTTATTGTGTTCTTGGTGACATTGT
TCTTGATCGCCAACGTCTGGGTCTCCTTACTCGTCCTCACATGTGTTGTC
TTCACTCTGGTAAGCAGAAAAAAAATTTACCCCTACTGTTTTGGATATTG
ACTTTTCGAAGTATCGAACCCCCTGGCAGTCTGTGCCACTAACTCGATCG
GGAAGATTTTTCCGAAATGGGAGGTTGAAAATTGACTGAATCTTCGGCGA
AGCTTACGATGACCTGCTAAAGTTGAAACTTTTTGGAGGTGAAAAAGCAT
CAAATTTTAAGATTTTGCACTGAAAGAGAAATAAACTTTACCGTAGAAAT
CTTGTTAAATTGTGAAAAAACTGCGTAGGCTACCCGAACGGGAAGTTCCA
ACCCGATCGAGTTTTCCTTATTTTCTCGCTTCTTCCCGATCTGGAAGTCC
GTTTTTTAACTCTTACCCATTCATTACCCGTTGGGTGTCAAGTTAATTTC
CTGTTCGGGAAGGCTCTTCCCATTTCGGAAGAATCTTCCCGATCTAGTTA
GTGGCACAGACTGCCTGGATATCCACTTTTAAAAATATGCTCAACTCCTT
TGGATATCCTCTCTTATAAAGATGCTTACCTCTGGATATCGTACTTTTTA
CTTGAAAAGACACTTTACCCCCTGGATATCCGCTCCCTTGTAGATATTTG
AAATTTAAGATATTTGAACAAAAATCGTTAAACCCCTTTGATATCCGATA
TCTTCAAAAGGAGGGGACGGACTTTTTCTGGAAAAGCTCATTATGGCGTA
ACATAAAAGTTGGTTAATTTTCGCGTGGGCGTTTTTCTTGAATTGAGAAT
CTAAAATTTTCGCATTGACGAAATTTGGCGAATCGGCCTCTTTTTCACAC
TACAGTATATGGCCCCCAAAACGGAGACGGCCCCCAAAACGGAGGTTTTC
ATTAATATGAAGATTCTGACTTGTAGATTTATCAGAATTAAACAATTGTT
GTTTATTTTGAAAGAATGATGGTTATACTTAAAAATGAGCATGTTTTTGA
TGGTTTGATACAGATTCAAAATAACATATTTGCGTCTAAAGGAAATATTT
TAACACCATAATTAGATAAAAATTGGATATAACTCACTCTAGCTCCTTGG
ATATTGAAAATAAGTTATGAAAACGGGGTATAGAAAACTTTCTACACCTA
ATGCCGTTCAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATCTTAAAGATAT
CTCGAGAAATCGCTAAAATTGCAAACCTCCGTTTTGGGGGCCATTAGAAA
AAAGCTACCTATCTTTAAGCGATTGAAAAAATTGTTGAAATTGAAAATTT
TGAAAAAGAACTTCCAGGAAATAAAGTAGAGATGTTAAAGGGGTTCGTTC
ATGCAGCAAAAATTTTTGTAAAAATCTCTTTTCCTCTAGATTTGAGAGAA
ATTTCAAATTTGATCGCCGTTTTGGGGGCCACATACTGTATATCTTTCAT
TTTCCTAGGGGTTTTTGGCCAAAATTCGGATTTTAAAATTATTTCGCGAG
GACTAATGTTTGCGAAAACCGCGAAGATTGATCAACGGGAAATTTGATTC
AGTCAATTTTTTTAAAGAGGGTTTTGGTAAAGTCTTGTATTTTAACAGTT
TCCTTATATTGTGATCAATACTATGTGCTAGACCTTCGGTGAAATTGTTT
TTGTGCTTCTCTTGGTAGGCATGCTTGACTCAAGGTGCCTTTTTCTTTAT
CGATGCCTTATCTTTCTGACATTCACAAGACCTTTTATTGTTTCAGCATA
AAAAAGACGGAATTGAGGAAATTTTTTCAAATAAATGATACATCCCCTAG
TGTTTTATACACCTTTTCGACGGTAGCCGCCAATTGCCGTGCGGGCATTT
TTATCCCACTAAAACCGTCCCAGTCCTTTTTTTCGTACCTATAGACAATA
AAAAAATGTGTCAAAAAAGAACTTGGACGGATAAAAATGCCCGCGCGGCA
ATTGGCGGCTACGGTCGAAAAGGTGTATTGAATGATTGTTTCGAAATTCT
TTTAGATCAACATTGCGGGTTACATGCATTTCTGGGGATTGACGGTTGAT
ACGGTGACCACTATCCAGTTGATTCTGGCTATCGGTCTGTCAGTCGATTA
TTCCGCTCATATCGGGCATGGTTTCATGGCTGCACGCGAAGGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045553XLOC_045553Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073406-exon-scaffold_91-1575043694:339489..339604TCONS_00073406-exon-scaffold_91-1575043694:339489..339604Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1575043694:338641..338813TCONS_00073406-exon-scaffold_91-1575043694:338641..338813Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1575043694:337749..337890TCONS_00073406-exon-scaffold_91-1575043694:337749..337890Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1575043694:336018..336155TCONS_00073406-exon-scaffold_91-1575043694:336018..336155Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1575043694:335141..335333TCONS_00073406-exon-scaffold_91-1575043694:335141..335333Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1575043694:334371..334486TCONS_00073406-exon-scaffold_91-1575043694:334371..334486Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1575043694:333195..333251TCONS_00073406-exon-scaffold_91-1575043694:333195..333251Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1575043694:332035..332136TCONS_00073406-exon-scaffold_91-1575043694:332035..332136Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1575043694:329896..330021TCONS_00073406-exon-scaffold_91-1575043694:329896..330021Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1575043694:326960..327099TCONS_00073406-exon-scaffold_91-1575043694:326960..327099Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1510915933:339489..339604TCONS_00073406-exon-scaffold_91-1510915933:339489..339604Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1510915933:338641..338813TCONS_00073406-exon-scaffold_91-1510915933:338641..338813Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1510915933:337749..337890TCONS_00073406-exon-scaffold_91-1510915933:337749..337890Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1510915933:336018..336155TCONS_00073406-exon-scaffold_91-1510915933:336018..336155Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1510915933:335141..335333TCONS_00073406-exon-scaffold_91-1510915933:335141..335333Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1510915933:334371..334486TCONS_00073406-exon-scaffold_91-1510915933:334371..334486Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1510915933:333195..333251TCONS_00073406-exon-scaffold_91-1510915933:333195..333251Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1510915933:332035..332136TCONS_00073406-exon-scaffold_91-1510915933:332035..332136Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1510915933:329896..330021TCONS_00073406-exon-scaffold_91-1510915933:329896..330021Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1510915933:326960..327099TCONS_00073406-exon-scaffold_91-1510915933:326960..327099Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1491911889:339489..339604TCONS_00073406-exon-scaffold_91-1491911889:339489..339604Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1491911889:338641..338813TCONS_00073406-exon-scaffold_91-1491911889:338641..338813Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1491911889:337749..337890TCONS_00073406-exon-scaffold_91-1491911889:337749..337890Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1491911889:336018..336155TCONS_00073406-exon-scaffold_91-1491911889:336018..336155Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1491911889:335141..335333TCONS_00073406-exon-scaffold_91-1491911889:335141..335333Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1491911889:334371..334486TCONS_00073406-exon-scaffold_91-1491911889:334371..334486Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1491911889:333195..333251TCONS_00073406-exon-scaffold_91-1491911889:333195..333251Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1491911889:332035..332136TCONS_00073406-exon-scaffold_91-1491911889:332035..332136Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1491911889:329896..330021TCONS_00073406-exon-scaffold_91-1491911889:329896..330021Clytia hemisphaericaexon
TCONS_00073406-exon-scaffold_91-1491911889:326960..327099TCONS_00073406-exon-scaffold_91-1491911889:326960..327099Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_91supercontigscaffold_91:326960..339604 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (2.12791 tpm) - - (69.5244 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.43656	5.80501	5.35343	8.48717	13.5515	17.9199	4.91635	8.71728	9.27689	9.98833	15.9943	10.9146	16.0064	16.4454	4.42235	9.91351	25.8781	26.3061	18.2033	16.6103	69.5244	52.6257	12.9529	14.3922	48.9524	31.1929	12.7602	9.4818	2.14336	2.12791
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073406 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
1002003004005006007008009001000110012001300Expect = 1.54e-28 / Id = 21.68SequenceNPC1
Match NameE-valueIdentityDescription
NPC11.536e-2821.68Niemann-Pick C1 protein OS=Homo sapiens GN=NPC1 PE... [more]
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