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TCONS_00073402 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073402
Unique NameTCONS_00073402
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1357

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073402 ID=TCONS_00073402|Name=TCONS_00073402|organism=Clytia hemisphaerica|type=transcript|length=1357bp
aTAGCTAGAAGAAAACATTATGGCGTTGAATAGCGGTTTCAATTCTTCAG
AAATGAATTTAACGTCTGGTACAGGACAAAGCAAAAGGGGAGAATACCAG
AGAGAAAACTTTCTAAGAAACACGAATCAAGTGACGGATCATTAcccgaa
aaataaaaaaccatgGTATTGTAaattgaagaatattttatggttggttg
tattttttttattgattgcTACCATAAGTTTGAGTTTGTCTTTGTATCGC
GACCGCAAGATGCAAACAATGGAAGGAAATTTTGCCACACAAAATATAGG
AGCAGTAAAAAGTAGTGGTGGAACATTGAAACTAAAGGCAGACCCGTTAA
CGATTGGTAATATCAATGGGCGTGAAATTGAATTTTGTGGCagtaatgaa
atgaaaagATCGTTTCCCGATTTTGATTATGCGTTATATGGATACAACAT
TGTCTTTGGATATCCGCTAGCTGTCGGTCATGACCCCGGATTAACTCGGC
CTATCTTTGTGGCTGATTATTCGAACTCGAAACGAACGGCTGATTGTAGA
TATCAAATTCCAAAGGGATATAACCTTGcTCCAGATGTATCGTGTGTGAC
GTCATTCTCGAGTGAAGAAATCAGCAACTCACGACAATTTACGCGCGAAC
TTTCAACTTCCGCAAATATAGGGGGCGGAGGATGGGGTGCTTCATTTTCC
GCCAGTGCGAgctacaaagaaaaagaatcatTCATGTCGACAgGGAAATC
AATATATATTATATCAACTGCATCCTGCAATTACTATTTCTCGCAAATGA
AGGAAGAGAATCCGCCATCTTTAACAAAAGATTTCATAAAAtacgcaaaa
aaattgaaaaacacaGACGATGTTTTTAAATTCTTCAAATATTATGGCAC
ACATTTTATGACGTATACTTTATTTGGCGCCCGATTTGTATacgaaaata
aaatgaaacaagaaTCAACGAAAACTGAAAGTGAAACAGGATATAGTCTT
TCAGCACAAGCAAGCTACTCCGGTGCTTTCAGCTTGAGTGGAGGTTTTAG
TATGTCAGGTTCTCAACGTAAAGCTGCAGAAGATTTTCAATCAAAGGTCG
AAACAACAACCGTCTCAATAGGTGCACCCCCACCCGCAGATGGTAACACG
ATGACTTGGGCGTCTACCGTTAAGGACACGCCCGTTCCTGTTAAATACAA
GTTAAGAGAGATTGACGAGTTGTTTACACCGAATTTCATGAAAGATGTTA
GTGATTTCAGAGATTACGAACGCGTCAGGAGTCTGATCAAGAAAAGCAAA
CCTTTGTATTGCAGGTATCTTACAGCCTTAGGTGAGTGTTATATTttaag
cgtacaa
Run BLAST on NCBI

protein sequence of TCONS_00073402-protein

>TCONS_00073402-protein ID=TCONS_00073402-protein|Name=TCONS_00073402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=446bp
MALNSGFNSSEMNLTSGTGQSKRGEYQRENFLRNTNQVTDHYPKNKKPWY
CKLKNILWLVVFFLLIATISLSLSLYRDRKMQTMEGNFATQNIGAVKSSG
GTLKLKADPLTIGNINGREIEFCGSNEMKRSFPDFDYALYGYNIVFGYPL
AVGHDPGLTRPIFVADYSNSKRTADCRYQIPKGYNLAPDVSCVTSFSSEE
ISNSRQFTRELSTSANIGGGGWGASFSASASYKEKESFMSTGKSIYIIST
ASCNYYFSQMKEENPPSLTKDFIKYAKKLKNTDDVFKFFKYYGTHFMTYT
LFGARFVYENKMKQESTKTESETGYSLSAQASYSGAFSLSGGFSMSGSQR
KAAEDFQSKVETTTVSIGAPPPADGNTMTWASTVKDTPVPVKYKLREIDE
LFTPNFMKDVSDFRDYERVRSLIKKSKPLYCRYLTALGECYILSVQ
Run BLAST on NCBI

transcript from alignment at scaffold_91:281283..287864-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073402 ID=TCONS_00073402|Name=TCONS_00073402|organism=Clytia hemisphaerica|type=transcript|length=6582bp|location=Sequence derived from alignment at scaffold_91:281283..287864- (Clytia hemisphaerica)
ATAGCTAGAAGAAAACATTATGGCGTTGAATAGCGGTTTCAATTCTTCAG AAATGAATTTAACGTCTGGTACAGGACAAAGCAAAAGGGGAGAATACCAG AGAGAAAACTTTCTAAGAAACACGAATCAAGTGACGGATCATTACCCGAA AAATAAAAAACCATGGTATTGTAAATTGAAGAATATTTTATGGTTGGTTG TATTTTTTTTATTGATTGCTACCATAAGTTTGAGTTTGTCTTTGTATCGC GACCGCAAGATGCAAACAATGGAAGGAAATTTTGCCACACAAAATATAGG AGCAGGTTTGTATTTCATCTTAATAATAAGAATTCACAATTAGGAATCTC ATCTTTTTGGCTAGCCGCTGATGTTCGACAATAACTCAGGCCCGCCGGAA GCGGGTAGGCTGAAGCCTCCCTACTTATGAGCAAAATAGACGTTTTTCTC CTATTCCTGGCAATCTCATTTTGAGCCTTTAGCATCTCCACTTTTACGGT TGTTCCGCCGGGAAGGGGGCTGTAACTGCTGGTGAAGCGGGATTTTTTGT TGAGTTTTGATGACCAGGGGGTGGTGACCACTGACCTTTATATACCCTGA ACACAATTTTCATACCAGCCAAGTCTAATCTCTGATTGGAGTTTTTTGAA AGTGGTACTCATCAATGCTAGTGAAAAAAAAAATTTTAAACGAAAGATTT CATTGAATTGCACAGGAAAAAATCTTAACATCCCAGAACCATGAGATTTT TTAATGATTACATAAAATATTTCTAATAAATTTCGGGGGTGAATTTGGCC ATTTTACAAACCTGGGAGAATTTTTATGCAACATTTTCCCACCCCAAAAA TGGCCATTATCCAGGCCTGGGATTTCTCGAGGTGTAAAATGGTCATTTTC GGGGTGGGATTTACTTTGCAAAAAATCGGAGATTTGAAAACTCACCCCGA AAATGGGCATATCCCAGGCCTGGTATTTCTTGGGATGTAAAATGTACGCA TGCGCAAGAATTTTCAAAAGGAGGATCTGTTCAAACCCACAAGCCACAAG TGGTTATTTAGTTAAAAGTGTTTAGCTTGTATCTAAACCAAAGCATTCTA TGGTTGTATTCGGTTAGTGTGTAACACAAAGCTGGTAAGGCGTCCCGCAA GGGCGGCCTCATTAGGGCGGCCTCATTCGTTCACAATGGATTTACGTCGC ATGGACTCAGTGGATCGGTGAGACGGGTTTGAGGTCATTAAGTTGGCTCT CAGGTGTAGCTCCACTTGTGTGACAAAAGTGCCGGTATTCTCAAAGTAGC GCAAGTACATGACAAAACGAATGGGAGCTATCGAGCCAATGCTCACAAAA TGATCAAATCCATTTAACAAATAATTAAAACGTAATTCATTTTCGTCATT TTCGCCCCCGAATATATAAATAACCAATCCAACCTGGAATCACGTTATTT TCAACCCTGAATAAGTAAATTTCCAACCTGGAAAAATGCTTTCCACCCTG GAAATAAGACCTTTTCGAACCTGGAAATACTGTTTTCTGAATTATATCGA GTCTGGAAAACTATTTTCTCTGGTGTGAATAAAGCACTTTTCTTACCCTG GAAAAAAGCGTTTTTCAAAGGCTGGAAGGGGCGCAACGCACTCCAGGGCT GGACAAGGATTTAGCGATTTTCCAGGTGGGAAAGTGGTCAATTTTCAACC CTGGAATTTGAAAGTTTAAAAGTGTATGGTACCACTTTTTTTTAAATCGC ACTCAAAGATGGCGGATATAGCTTGGTCTATGGTATATAAAGATTAGTGG GAGTAACAACCCTCGAATGCCCCTCCAATGGTTGCAAAGGAACAATTCAT TCTCTGAAAGAGTCCAAATGTCACGCTCATCGAAAGTTCTCCCTCTCAAA GGGTTGCGATTCTCAGAAATTTAGACCAAAATGAGTGCAAATTGACAAAA ATTTTGACGGGTGTTAAACATATAAAGCATTAAAAATCTCTTTTTTATCC CATTATTAGTAAAAAGTAGTGGTGGAACATTGAAACTAAAGGCAGACCCG TTAACGATTGGTAATATCAATGGGCGTGAAATTGAATTTTGTGGCAGTAA TGAAATGAAAAGGTATTATATTAATTAGTCTTGGGTACTTACTAGCCGGA GGGGGGGGGGGGAATTAATTTTTCGACCACCCAGGACATTCTTATTCCAA CCCCCCTCCCCCGCTTATTGATTTTTGGGAAAATCTTTTTGAAAGTTCCC TTTTGCCCTAATTCTGCTGTATTAGCCTTCTTTTCGAAATTTTCCACCCC GGACATTTTTATTCCAACCCGGCCGGCTATTAGGTACTCGAGAGGAATTT TGCACCCAGGCTGGTAACCTTGGAATGAAAATGTCCTTTGGTTGAATTTT TTTGAAAAGGCGGCTAATACAGCAGAATTATGACAAAAGAGGAAACTTTC AAAAACATTTTCCCAAAAATTTGTAAGCAGGGGGGGAGGGGTGTTGGAAT AAGAATGTCCTGGTTGGAAAATCTTCAAAAAATTAATTAGCGGGGGACTC TTAAGGGAAGAAATCTTCGCCGAATTTAATTTCGCGGTTTTTTTGACAAA TTAAATTCCGCGAAACACGAATTTTCTCAGGATTTGAAAAACCATCTCTA AAATTGAGCTTTTTAAGGAAAAATTGGCCAAAATGTAAACAAAAAATTCT CTTAACCACGAAATTAAATTCTGAGAAACTTCCGAATTTTGAGCTGTGAA CCGCTCCGATAAGATTTATTGTTACAATAGAACATTTATTACAATAGAAT TCCCTCGAGGAATTCCTAAGTGATTTCTATTGTAATACTCTCGAAACAAT CCCACAATGCATCGCTTTATTAAAAGAAACTTAAATTGGAATAAAAAAAT AATGTACTTTTAATAAAGTTATCAAATACACCTTTTTTTATAAGAACAAA CTATATAGGAACACAAAGCTTCGGTGGCTAAAATGTTAGGAACAAGCTTA GAACATTTTAAGGTTTTGTGGACTCTAAAACACAATTTCTTGGGAAATTT GGCAAAAACACTCACAAAATGGTGAAAATAAGAAAATTTTGGATGTTCTT ATAAAAAAAACTGAAATCTTGATAATCGATTTTTCTTTCTTTCTTCAATC CACTCAGATCGTTTCCCGATTTTGATTATGCGTTATATGGATACAACATT GTCTTTGGATATCCGCTAGCTGTCGGTCATGACCCCGGATTAACTCGGCC TATCTTTGTGGCTGATTATTCGAACTCGAAACGAACGGCTGATTGTAGAT ATCAAATTCCAAAGGGATATAACCTTGGTAAGAATTTTTCTGTAACTTTA ATCTAATTTTTTAATTTTTGGTTAATTCCTCGTTTTCAGCAATTTAAAGT TCGGGCGAAAAAGTCGCTTTTGGGCAAATTGATAAATTTAGTCGAATATT TTAGTTCGTGAGGGGTTCATAGACTTCCAGGCTATATTCTGAGCCCTATT GGACCATTCTTGGACTTTTAGTTCCTCAGATCCTAGGCTCGCAGGTCTTA AGTCTAGCGTTAAAACTCAGAGTTAAAACTCTACCCGCCCAACCTAATTA AGAATCCCAAATCGTTTGTGGTTGTAAGATTTCCTGGGAATTTCCCTTTT TTCTCAAATATTATGACTTTGATTGTAACTCGTGCGATATTTATTACATG TCATTATGCCAGAATATCATTATGTTTAGAACGAAAATTTGGGTTTTTGG CAGAATCATTCATTTACCAAAATAAGTGAATTCAGATTTAGAATTAAGAA GAAGTAACTGTTAAGAATTTGTTTACCTATGTATGAGAAATTAAAGAATA CTGGCTCCGTAATAGCTTAAATGATAACTTTATAGAAATAGGTAGGGATT ATTTTGCGCATAGCTTATGCGAGACTAATTTATTTTTTTGTTTTACGGGA CAAGCTACCCAAAAAAGAGGGTCGGTCGGTCGGCGAAAAAATAAGAATAA AAGTAAAATTTCATCCTTTAAAATCTCCTAAGTAAAGGCAGCAAAAACTA CTAGAAATTGACGAAAAAAATAGAAAATTAAAAAGATATAGAAAGTAAAA AGACACAAAGAGCTCGAATTCACGAATAGAATGAAACCATAAAATCAATT TTATTTTCATTTCGATTTTCGCAATTTCAGAGTCGGCCGGGCCCGTAAAA CAACTAATCAAATTGGTCTCGCCAATAAATTTGAATAAATAAATACGAAT AAATCCGAATAAATAAATTCCTACGCTCACTTGATACGCGTGATACCGTT CCAGCCCGACTAACGTGCCAGTCTAGGTTTCGCAGAAATATGACGGTTAA TTTGAATTTTCTTTTAGCTCCAGATGTATCGTGTGTGACGTCATTCTCGA GTGAAGAAATCAGCAACTCACGACAATTTACGCGCGAACTTTCAACTTCC GCAAATATAGGGGGCGGAGGATGGGGTGCTTCATTTTCCGCCAGTGCGAG CTACAAAGAAAAAGAATCATTCATGTCGACAGGTAATTGAATTTTTTTCA TTGAAAAATTGAAAATAAGGAAATCTTCGTTCTTCAATTAATGTTTTAAT TCAAATTAAGCATAAACCCTGAAAAGATAATTCAGATTACTTTAATTTTC GAGAAAAATAATTTCTCATTTTGAAAATGAGGATAAAAAAATGAAACAGG AAAATATGCTATCGAATAGTTACCGTAGTAGCAAGGATGACTTTAATACC AAACAAAAAATTCAAAAATATTTTCTCCAAGAACCAGCCGATATAAAAAG GTAAGTTTTATGGAAAATCTATACCTTATCGGGGAAAAAAATGTCGGGGT TTTAATTAGTCGAGGTAAAAATTTCGTCACCTAGAGGCATTTTCGTCACT TTTCCCCGACCAAGATTTCAAATTCGTCACTTTCACCCGACTAAATTGTC GAAAGGAAATTCCTTCACTAGCTCGAAAATGGATCTTGTACTTCGACATT TAAAGCACTAATTTCAGTAAATAAAGGTGTAGAAAAATTAGATTTGAATT TTGGTTGCGGTATAAAATTTCGGGTAAATGTTTCGGTCGGTGATGAAAAA ATCGCTTACAAGTTTTGGTCGGGTGATAAAATGTCGGGAAAATATTTCGT CGGAGAAAAAATTCGTCATCCCTTCAAAATTTTCGTCACTTTCCCCCGAC ATTCTTTTCCCCGATAAGTTATTCTATATTATATTCTATTATTATGTTCA CAGGGAAATCAATATATATTATATCAACTGCATCCTGCAATTACTATTTC TCGCAAATGAAGGAAGAGAATCCGCCATCTTTAACAAAAGATTTCATAAA ATACGCAAAAAAATTGAAAAACACAGACGATGTTTTTAAATTCTTCAAAT ATTATGGCACACATTTTATGACGTATACTTTATTTGGCGCCCGATTTGTA TACGAAAATAAAATGAAACAAGAATCAACGAAAACTGAAAGTGAAACAGG ATATAGTCTTTCAGCACAAGCAAGCTACTCCGGTGCTTTCAGCTTGAGTG GAGGTTTTAGTATGTCAGGTTCTCAACGTAAAGCTGCAGAAGATTTTCAA TCAAAGGTCGAAACAACAACCGTCTCAATAGGTATAATTTTGTTCAAAGT GTAGAACTACTATTAACTCTCGCTAATAATATGAACTTAATTTAAACTAG TACTTAAACTATGCTCCTGTAACTTATGACATTTCCAAAAAGGACATAAG TTTTTGGCAAAAGACTGGGGGCCTTAGGCATGGTCATTTATACATCAAAA GAAGCGTATTATGGTGTAGATTTTTAATAAAATCTACTTTTTGACTTTTC TGAGAAATTAGAAAAAAAGTACGTTATGACGTCATAATTGACGACGTCAT AGAACTTAAAATTTGAATATGTCAAAACGTAAAAGTGTCAAAAGATTATG AAATTTTGCCTAGTGACTACTCTGTACCAGAGTGTATCTCACGTTTATCG CTTCGTAGTACCAAGCTGTTTGATAAAAAAATTCCCGTACAGAGACCTCT GCGATAAAGTATGATTTACAAATAGCAACACAACTCTTATTGTCTCCCCT CTCTCGCCAACACTCCATCGCAGCAGTTGGTTTGAAAAATCTCAAAAAAA GACAATGAGAAAAGACAATGACAACAGACCCTCTACGGCAATCTCCAACT TTTGAAACAAAACTTTTTAAATTTTTCTAATAACATCAGCTGAAATTGAT CTTTGATATTCGATTTTGAAAAAATGATTTGCCGCTAGTTTTAATTAGAG TGGTTTAATATGTTACCTAATACGATATTCTCTGTTACCAAACTAGGTGC ACCCCCACCCGCAGATGGTAACACGATGACTTGGGCGTCTACCGTTAAGG ACACGCCCGTTCCTGTTAAATACAAGTTAAGAGAGATTGACGAGTTGTTT ACACCGAATTTCATGAAAGATGTTAGTGATTTCAGAGATTACGAACGCGT CAGGAGTCTGATCAAGAAAAGCAAACCTTTGTATTGCAGGTATCTTACAG CCTTAGGTGAGTGTTATATTTTAAGCGTACAA

Coding sequence (CDS) from alignment at scaffold_91:281283..287864-

>TCONS_00073402 ID=TCONS_00073402|Name=TCONS_00073402|organism=Clytia hemisphaerica|type=CDS|length=8028bp|location=Sequence derived from alignment at scaffold_91:281283..287864- (Clytia hemisphaerica)
GTGCACCCCCACCCGCAGATGGTAACACGATGACTTGGGCGTCTACCGTT
AAGGACACGCCCGTTCCTGTTAAATACAAGTTAAGAGAGATTGACGAGTT
GTTTACACCGAATTTCATGAAAGATGTTAGTGATTTCAGAGATTACGAAC
GCGTCAGGAGTCTGATCAAGAAAAGCAAACCTTTGTATTGCAGGTATCTT
ACAGCCTTAGGTGAGTGTTATATTTTAAGCGTACAAGGAAATCAATATAT
ATTATATCAACTGCATCCTGCAATTACTATTTCTCGCAAATGAAGGAAGA
GAATCCGCCATCTTTAACAAAAGATTTCATAAAATACGCAAAAAAATTGA
AAAACACAGACGATGTTTTTAAATTCTTCAAATATTATGGCACACATTTT
ATGACGTATACTTTATTTGGCGCCCGATTTGTATACGAAAATAAAATGAA
ACAAGAATCAACGAAAACTGAAAGTGAAACAGGATATAGTCTTTCAGCAC
AAGCAAGCTACTCCGGTGCTTTCAGCTTGAGTGGAGGTTTTAGTATGTCA
GGTTCTCAACGTAAAGCTGCAGAAGATTTTCAATCAAAGGTCGAAACAAC
AACCGTCTCAATAGCTCCAGATGTATCGTGTGTGACGTCATTCTCGAGTG
AAGAAATCAGCAACTCACGACAATTTACGCGCGAACTTTCAACTTCCGCA
AATATAGGGGGCGGAGGATGGGGTGCTTCATTTTCCGCCAGTGCGAGCTA
CAAAGAAAAAGAATCATTCATGTCGACAGATCGTTTCCCGATTTTGATTA
TGCGTTATATGGATACAACATTGTCTTTGGATATCCGCTAGCTGTCGGTC
ATGACCCCGGATTAACTCGGCCTATCTTTGTGGCTGATTATTCGAACTCG
AAACGAACGGCTGATTGTAGATATCAAATTCCAAAGGGATATAACCTTGT
AAAAAGTAGTGGTGGAACATTGAAACTAAAGGCAGACCCGTTAACGATTG
GTAATATCAATGGGCGTGAAATTGAATTTTGTGGCAGTAATGAAATGAAA
AGATGGCGTTGAATAGCGGTTTCAATTCTTCAGAAATGAATTTAACGTCT
GGTACAGGACAAAGCAAAAGGGGAGAATACCAGAGAGAAAACTTTCTAAG
AAACACGAATCAAGTGACGGATCATTACCCGAAAAATAAAAAACCATGGT
ATTGTAAATTGAAGAATATTTTATGGTTGGTTGTATTTTTTTTATTGATT
GCTACCATAAGTTTGAGTTTGTCTTTGTATCGCGACCGCAAGATGCAAAC
AATGGAAGGAAATTTTGCCACACAAAATATAGGAGCAGGTGCACCCCCAC
CCGCAGATGGTAACACGATGACTTGGGCGTCTACCGTTAAGGACACGCCC
GTTCCTGTTAAATACAAGTTAAGAGAGATTGACGAGTTGTTTACACCGAA
TTTCATGAAAGATGTTAGTGATTTCAGAGATTACGAACGCGTCAGGAGTC
TGATCAAGAAAAGCAAACCTTTGTATTGCAGGTATCTTACAGCCTTAGGT
GAGTGTTATATTTTAAGCGTACAAGGAAATCAATATATATTATATCAACT
GCATCCTGCAATTACTATTTCTCGCAAATGAAGGAAGAGAATCCGCCATC
TTTAACAAAAGATTTCATAAAATACGCAAAAAAATTGAAAAACACAGACG
ATGTTTTTAAATTCTTCAAATATTATGGCACACATTTTATGACGTATACT
TTATTTGGCGCCCGATTTGTATACGAAAATAAAATGAAACAAGAATCAAC
GAAAACTGAAAGTGAAACAGGATATAGTCTTTCAGCACAAGCAAGCTACT
CCGGTGCTTTCAGCTTGAGTGGAGGTTTTAGTATGTCAGGTTCTCAACGT
AAAGCTGCAGAAGATTTTCAATCAAAGGTCGAAACAACAACCGTCTCAAT
AGCTCCAGATGTATCGTGTGTGACGTCATTCTCGAGTGAAGAAATCAGCA
ACTCACGACAATTTACGCGCGAACTTTCAACTTCCGCAAATATAGGGGGC
GGAGGATGGGGTGCTTCATTTTCCGCCAGTGCGAGCTACAAAGAAAAAGA
ATCATTCATGTCGACAGATCGTTTCCCGATTTTGATTATGCGTTATATGG
ATACAACATTGTCTTTGGATATCCGCTAGCTGTCGGTCATGACCCCGGAT
TAACTCGGCCTATCTTTGTGGCTGATTATTCGAACTCGAAACGAACGGCT
GATTGTAGATATCAAATTCCAAAGGGATATAACCTTGTAAAAAGTAGTGG
TGGAACATTGAAACTAAAGGCAGACCCGTTAACGATTGGTAATATCAATG
GGCGTGAAATTGAATTTTGTGGCAGTAATGAAATGAAAAGATGGCGTTGA
ATAGCGGTTTCAATTCTTCAGAAATGAATTTAACGTCTGGTACAGGACAA
AGCAAAAGGGGAGAATACCAGAGAGAAAACTTTCTAAGAAACACGAATCA
AGTGACGGATCATTACCCGAAAAATAAAAAACCATGGTATTGTAAATTGA
AGAATATTTTATGGTTGGTTGTATTTTTTTTATTGATTGCTACCATAAGT
TTGAGTTTGTCTTTGTATCGCGACCGCAAGATGCAAACAATGGAAGGAAA
TTTTGCCACACAAAATATAGGAGCAGGTGCACCCCCACCCGCAGATGGTA
ACACGATGACTTGGGCGTCTACCGTTAAGGACACGCCCGTTCCTGTTAAA
TACAAGTTAAGAGAGATTGACGAGTTGTTTACACCGAATTTCATGAAAGA
TGTTAGTGATTTCAGAGATTACGAACGCGTCAGGAGTCTGATCAAGAAAA
GCAAACCTTTGTATTGCAGGTATCTTACAGCCTTAGGTGAGTGTTATATT
TTAAGCGTACAAGGAAATCAATATATATTATATCAACTGCATCCTGCAAT
TACTATTTCTCGCAAATGAAGGAAGAGAATCCGCCATCTTTAACAAAAGA
TTTCATAAAATACGCAAAAAAATTGAAAAACACAGACGATGTTTTTAAAT
TCTTCAAATATTATGGCACACATTTTATGACGTATACTTTATTTGGCGCC
CGATTTGTATACGAAAATAAAATGAAACAAGAATCAACGAAAACTGAAAG
TGAAACAGGATATAGTCTTTCAGCACAAGCAAGCTACTCCGGTGCTTTCA
GCTTGAGTGGAGGTTTTAGTATGTCAGGTTCTCAACGTAAAGCTGCAGAA
GATTTTCAATCAAAGGTCGAAACAACAACCGTCTCAATAGCTCCAGATGT
ATCGTGTGTGACGTCATTCTCGAGTGAAGAAATCAGCAACTCACGACAAT
TTACGCGCGAACTTTCAACTTCCGCAAATATAGGGGGCGGAGGATGGGGT
GCTTCATTTTCCGCCAGTGCGAGCTACAAAGAAAAAGAATCATTCATGTC
GACAGATCGTTTCCCGATTTTGATTATGCGTTATATGGATACAACATTGT
CTTTGGATATCCGCTAGCTGTCGGTCATGACCCCGGATTAACTCGGCCTA
TCTTTGTGGCTGATTATTCGAACTCGAAACGAACGGCTGATTGTAGATAT
CAAATTCCAAAGGGATATAACCTTGTAAAAAGTAGTGGTGGAACATTGAA
ACTAAAGGCAGACCCGTTAACGATTGGTAATATCAATGGGCGTGAAATTG
AATTTTGTGGCAGTAATGAAATGAAAAGATGGCGTTGAATAGCGGTTTCA
ATTCTTCAGAAATGAATTTAACGTCTGGTACAGGACAAAGCAAAAGGGGA
GAATACCAGAGAGAAAACTTTCTAAGAAACACGAATCAAGTGACGGATCA
TTACCCGAAAAATAAAAAACCATGGTATTGTAAATTGAAGAATATTTTAT
GGTTGGTTGTATTTTTTTTATTGATTGCTACCATAAGTTTGAGTTTGTCT
TTGTATCGCGACCGCAAGATGCAAACAATGGAAGGAAATTTTGCCACACA
AAATATAGGAGCAGGTGCACCCCCACCCGCAGATGGTAACACGATGACTT
GGGCGTCTACCGTTAAGGACACGCCCGTTCCTGTTAAATACAAGTTAAGA
GAGATTGACGAGTTGTTTACACCGAATTTCATGAAAGATGTTAGTGATTT
CAGAGATTACGAACGCGTCAGGAGTCTGATCAAGAAAAGCAAACCTTTGT
ATTGCAGGTATCTTACAGCCTTAGGTGAGTGTTATATTTTAAGCGTACAA
GGAAATCAATATATATTATATCAACTGCATCCTGCAATTACTATTTCTCG
CAAATGAAGGAAGAGAATCCGCCATCTTTAACAAAAGATTTCATAAAATA
CGCAAAAAAATTGAAAAACACAGACGATGTTTTTAAATTCTTCAAATATT
ATGGCACACATTTTATGACGTATACTTTATTTGGCGCCCGATTTGTATAC
GAAAATAAAATGAAACAAGAATCAACGAAAACTGAAAGTGAAACAGGATA
TAGTCTTTCAGCACAAGCAAGCTACTCCGGTGCTTTCAGCTTGAGTGGAG
GTTTTAGTATGTCAGGTTCTCAACGTAAAGCTGCAGAAGATTTTCAATCA
AAGGTCGAAACAACAACCGTCTCAATAGCTCCAGATGTATCGTGTGTGAC
GTCATTCTCGAGTGAAGAAATCAGCAACTCACGACAATTTACGCGCGAAC
TTTCAACTTCCGCAAATATAGGGGGCGGAGGATGGGGTGCTTCATTTTCC
GCCAGTGCGAGCTACAAAGAAAAAGAATCATTCATGTCGACAGATCGTTT
CCCGATTTTGATTATGCGTTATATGGATACAACATTGTCTTTGGATATCC
GCTAGCTGTCGGTCATGACCCCGGATTAACTCGGCCTATCTTTGTGGCTG
ATTATTCGAACTCGAAACGAACGGCTGATTGTAGATATCAAATTCCAAAG
GGATATAACCTTGTAAAAAGTAGTGGTGGAACATTGAAACTAAAGGCAGA
CCCGTTAACGATTGGTAATATCAATGGGCGTGAAATTGAATTTTGTGGCA
GTAATGAAATGAAAAGATGGCGTTGAATAGCGGTTTCAATTCTTCAGAAA
TGAATTTAACGTCTGGTACAGGACAAAGCAAAAGGGGAGAATACCAGAGA
GAAAACTTTCTAAGAAACACGAATCAAGTGACGGATCATTACCCGAAAAA
TAAAAAACCATGGTATTGTAAATTGAAGAATATTTTATGGTTGGTTGTAT
TTTTTTTATTGATTGCTACCATAAGTTTGAGTTTGTCTTTGTATCGCGAC
CGCAAGATGCAAACAATGGAAGGAAATTTTGCCACACAAAATATAGGAGC
AGGTGCACCCCCACCCGCAGATGGTAACACGATGACTTGGGCGTCTACCG
TTAAGGACACGCCCGTTCCTGTTAAATACAAGTTAAGAGAGATTGACGAG
TTGTTTACACCGAATTTCATGAAAGATGTTAGTGATTTCAGAGATTACGA
ACGCGTCAGGAGTCTGATCAAGAAAAGCAAACCTTTGTATTGCAGGTATC
TTACAGCCTTAGGTGAGTGTTATATTTTAAGCGTACAAGGAAATCAATAT
ATATTATATCAACTGCATCCTGCAATTACTATTTCTCGCAAATGAAGGAA
GAGAATCCGCCATCTTTAACAAAAGATTTCATAAAATACGCAAAAAAATT
GAAAAACACAGACGATGTTTTTAAATTCTTCAAATATTATGGCACACATT
TTATGACGTATACTTTATTTGGCGCCCGATTTGTATACGAAAATAAAATG
AAACAAGAATCAACGAAAACTGAAAGTGAAACAGGATATAGTCTTTCAGC
ACAAGCAAGCTACTCCGGTGCTTTCAGCTTGAGTGGAGGTTTTAGTATGT
CAGGTTCTCAACGTAAAGCTGCAGAAGATTTTCAATCAAAGGTCGAAACA
ACAACCGTCTCAATAGCTCCAGATGTATCGTGTGTGACGTCATTCTCGAG
TGAAGAAATCAGCAACTCACGACAATTTACGCGCGAACTTTCAACTTCCG
CAAATATAGGGGGCGGAGGATGGGGTGCTTCATTTTCCGCCAGTGCGAGC
TACAAAGAAAAAGAATCATTCATGTCGACAGATCGTTTCCCGATTTTGAT
TATGCGTTATATGGATACAACATTGTCTTTGGATATCCGCTAGCTGTCGG
TCATGACCCCGGATTAACTCGGCCTATCTTTGTGGCTGATTATTCGAACT
CGAAACGAACGGCTGATTGTAGATATCAAATTCCAAAGGGATATAACCTT
GTAAAAAGTAGTGGTGGAACATTGAAACTAAAGGCAGACCCGTTAACGAT
TGGTAATATCAATGGGCGTGAAATTGAATTTTGTGGCAGTAATGAAATGA
AAAGATGGCGTTGAATAGCGGTTTCAATTCTTCAGAAATGAATTTAACGT
CTGGTACAGGACAAAGCAAAAGGGGAGAATACCAGAGAGAAAACTTTCTA
AGAAACACGAATCAAGTGACGGATCATTACCCGAAAAATAAAAAACCATG
GTATTGTAAATTGAAGAATATTTTATGGTTGGTTGTATTTTTTTTATTGA
TTGCTACCATAAGTTTGAGTTTGTCTTTGTATCGCGACCGCAAGATGCAA
ACAATGGAAGGAAATTTTGCCACACAAAATATAGGAGCAGGTGCACCCCC
ACCCGCAGATGGTAACACGATGACTTGGGCGTCTACCGTTAAGGACACGC
CCGTTCCTGTTAAATACAAGTTAAGAGAGATTGACGAGTTGTTTACACCG
AATTTCATGAAAGATGTTAGTGATTTCAGAGATTACGAACGCGTCAGGAG
TCTGATCAAGAAAAGCAAACCTTTGTATTGCAGGTATCTTACAGCCTTAG
GTGAGTGTTATATTTTAAGCGTACAAGGAAATCAATATATATTATATCAA
CTGCATCCTGCAATTACTATTTCTCGCAAATGAAGGAAGAGAATCCGCCA
TCTTTAACAAAAGATTTCATAAAATACGCAAAAAAATTGAAAAACACAGA
CGATGTTTTTAAATTCTTCAAATATTATGGCACACATTTTATGACGTATA
CTTTATTTGGCGCCCGATTTGTATACGAAAATAAAATGAAACAAGAATCA
ACGAAAACTGAAAGTGAAACAGGATATAGTCTTTCAGCACAAGCAAGCTA
CTCCGGTGCTTTCAGCTTGAGTGGAGGTTTTAGTATGTCAGGTTCTCAAC
GTAAAGCTGCAGAAGATTTTCAATCAAAGGTCGAAACAACAACCGTCTCA
ATAGCTCCAGATGTATCGTGTGTGACGTCATTCTCGAGTGAAGAAATCAG
CAACTCACGACAATTTACGCGCGAACTTTCAACTTCCGCAAATATAGGGG
GCGGAGGATGGGGTGCTTCATTTTCCGCCAGTGCGAGCTACAAAGAAAAA
GAATCATTCATGTCGACAGATCGTTTCCCGATTTTGATTATGCGTTATAT
GGATACAACATTGTCTTTGGATATCCGCTAGCTGTCGGTCATGACCCCGG
ATTAACTCGGCCTATCTTTGTGGCTGATTATTCGAACTCGAAACGAACGG
CTGATTGTAGATATCAAATTCCAAAGGGATATAACCTTGTAAAAAGTAGT
GGTGGAACATTGAAACTAAAGGCAGACCCGTTAACGATTGGTAATATCAA
TGGGCGTGAAATTGAATTTTGTGGCAGTAATGAAATGAAAAGATGGCGTT
GAATAGCGGTTTCAATTCTTCAGAAATGAATTTAACGTCTGGTACAGGAC
AAAGCAAAAGGGGAGAATACCAGAGAGAAAACTTTCTAAGAAACACGAAT
CAAGTGACGGATCATTACCCGAAAAATAAAAAACCATGGTATTGTAAATT
GAAGAATATTTTATGGTTGGTTGTATTTTTTTTATTGATTGCTACCATAA
GTTTGAGTTTGTCTTTGTATCGCGACCGCAAGATGCAAACAATGGAAGGA
AATTTTGCCACACAAAATATAGGAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045552XLOC_045552Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073402-proteinTCONS_00073402-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073402-exon-scaffold_91-1575043694:287560..287864TCONS_00073402-exon-scaffold_91-1575043694:287560..287864Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1575043694:285753..285855TCONS_00073402-exon-scaffold_91-1575043694:285753..285855Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1575043694:284538..284707TCONS_00073402-exon-scaffold_91-1575043694:284538..284707Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1575043694:283333..283497TCONS_00073402-exon-scaffold_91-1575043694:283333..283497Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1575043694:282234..282611TCONS_00073402-exon-scaffold_91-1575043694:282234..282611Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1575043694:281283..281518TCONS_00073402-exon-scaffold_91-1575043694:281283..281518Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1510915933:287560..287864TCONS_00073402-exon-scaffold_91-1510915933:287560..287864Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1510915933:285753..285855TCONS_00073402-exon-scaffold_91-1510915933:285753..285855Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1510915933:284538..284707TCONS_00073402-exon-scaffold_91-1510915933:284538..284707Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1510915933:283333..283497TCONS_00073402-exon-scaffold_91-1510915933:283333..283497Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1510915933:282234..282611TCONS_00073402-exon-scaffold_91-1510915933:282234..282611Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1510915933:281283..281518TCONS_00073402-exon-scaffold_91-1510915933:281283..281518Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1491911889:287560..287864TCONS_00073402-exon-scaffold_91-1491911889:287560..287864Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1491911889:285753..285855TCONS_00073402-exon-scaffold_91-1491911889:285753..285855Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1491911889:284538..284707TCONS_00073402-exon-scaffold_91-1491911889:284538..284707Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1491911889:283333..283497TCONS_00073402-exon-scaffold_91-1491911889:283333..283497Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1491911889:282234..282611TCONS_00073402-exon-scaffold_91-1491911889:282234..282611Clytia hemisphaericaexon
TCONS_00073402-exon-scaffold_91-1491911889:281283..281518TCONS_00073402-exon-scaffold_91-1491911889:281283..281518Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_91supercontigscaffold_91:281283..287864 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.030904 0.0301362 0 0 0.29173 0.164664 0.317855 0.409162 1.09377 6.77406 1.06453 1.23491 1.56205 4.54643 30.0251 7.90944 6.44946 8.06099 15.1117 12.8226 1.01591 1.18052 5.06704 8.56907 6.43696 10.7197 5.33931 7.00976 25.6571 19.2909
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020864MACPF
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073402 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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