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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073392 ID=TCONS_00073392|Name=TCONS_00073392|organism=Clytia hemisphaerica|type=transcript|length=1503bp
CTTGTGTGTAGCTATAGATCTAAGTATCAAGATCTTGTCAAATCTGCAAA
TTccatttgaaaaaaagtctGTTCTTCGAGCCCTTTCTTGCGGGGTCCCC
TTTCTTAAGAATAGAGTGACACTTCTAATTAATGGACACATGGCGTGCAA
ACAGGTCAGTGACCGCCAACTGTTTTATAAGTATTTCTAGGAAAGGaacg
atggccaagtggtcaaaggcatcagcgtctcaaaccagggattcacggtt
cgaatccccgctcctttcAATGTcctgttcagttcatagatagccgagcc
ggttggccgtggaccccgtgaatcGAAATcgaaacaatcgaaagactgtc
gaaaagtcctagattactgggttatccacgtaaaatatcgactcgaCTCA
AACGGCCGGAGAAAATGAAactgtccgctaattagaagtttCCTCCTTTT
CGAGCGAGTGTGTGTTAATTGGAAATTGTTAATGTTGTTAATGTAGGAAA
AAATTAACATGTAATTGTAATGTTCTTACAGCAGTTCTCAATGCGAGAGA
AACATTTTCGGCGATCGAGCGGTCACGATTTTTAGGGCCACCAATGTTGT
CCCAATTTTGAATAATGACAAAGACATCATCCACGCCGATACCTAGGAGC
AAGAAGGGTAGAACACTGTGGACGGGTGTTGAAAAGAGTTGGAATGCACT
TGATAATCCATAAGCAATACCAATTGCAAGGCCAATGTTCAAAACACCAC
ACAATGCTAACCAAAcctatcaaaaaagaaatttgaatgagTGAATTTGG
ACgaaatggagtttttacaaattCTAActagtaataaaacaattttaata
ctttttctaaagaatgcgtcatttttattacttcaaatgaccaattatta
aagtaacAATGCTTACAACTCCATCTCATCCGAGTGAATTAGAATCTTAT
GTCAAAGATCGGCAACATGGAAACAGTATTTTCTTAAGATTTTTTCCAAT
GCCAAGAAAATTGTAAATTGAAAAAAAATCGTAGATAATGATGCATCTGA
TATTATTCAAAACAGTTAATACCATTCTCGTTCGACCGATGTTAGATGCA
TGCGTTACATTATATATGTAGATAATTTTAGAAATAAATAAAAAGTTTAT
CATAACGTGGGTATCTATGAATAAAATTGTTAACATCTTTAAACCTATCG
TTGATACTAGGCTTTTAGGGGCGGTTCAAAACTAGGGGGGTGTTCCTGTA
CCACCCCTTAACTTTTGATCTAGTGGGTCTTTTTGGATGAAATCTTGGCA
CACAAGATCTTTGTCACATAAGGTAACTTTTGACAAATAATTTTTTTGAT
GACGTCACTCACCATGCCCACAGTGATCAAAAACCGAGAATTTCCTTTGT
TCTTACAAATAGCTATTGTTTTCTAACAAAAGCTTTAAAAAAGTTCCCTG
AGTCTAAAATGCTTATTTTTATCCTAAATATTCAATAAATTACGGTTTAA
ACG Run BLAST on NCBI transcript from alignment at scaffold_91:338960..341672+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073392 ID=TCONS_00073392|Name=TCONS_00073392|organism=Clytia hemisphaerica|type=transcript|length=2713bp|location=Sequence derived from alignment at scaffold_91:338960..341672+ (Clytia hemisphaerica)
CTTGTGTGTAGCTATAGATCTAAGTATCAAGATCTTGTCAAATCTGCAAA
TTccatttgaaaaaaagtctGTTCTTCGAGCCCTTTCTTGCGGGGTCCCC
TTTCTTAAGAATAGAGTGACACTTCTAATTAATGGACACATGGCGTGCAA
ACAGGTCAGTGACCGCCAACTGTTTTATAAGTATTTCTAGGAAAGGaacg
atggccaagtggtcaaaggcatcagcgtctcaaaccagggattcacggtt
cgaatccccgctcctttcAATGTcctgttcagttcatagatagccgagcc
ggttggccgtggaccccgtgaatcGAAATcgaaacaatcgaaagactgtc
gaaaagtcctagattactgggttatccacgtaaaatatcgactcgaCTCA
AACGGCCGGAGAAAATGAAactgtccgctaattagaagtttCCTCCTTTT
CGAGCGAGTGTGTGTTAATTGGAAATTGTTAATGTTGTTAATGTAGGAAA
AAATTAACATGTAATTGTAATGTTCTTACAGCAGTTCTCAATGCGAGAGA
AACATTTTCGGCGATCGAGCGGTCACGATTTTTAGGGCCACCAATGTTGT
CCCAATTTTGAATAATGACAAAGACATCATCCACGCCGAtaccttgaaaa
aaaaacgtagtcgcacggtcaggcgcgtgccactttattatttaatcatc
cccctaaactcgatccaatccttttttgacacatttttctacagtctata
ggtgcgaaaaaaggactgggacggttttagtaagataaagcggacaaaaa
tgcccacgcggcaattggtggctacgttCGAAAAGGTGTATGAAACTCCT
GTCAAAAAATATCTAGCGCCGGGGTCAGCGAGGTTTTGCAAAGAGCAGAA
CAGGTTAtcacagtggagtctccataactcgaacgcgcacggggaataca
aatttgctcgagttatagaggttcgagttaaagagactcaactgtatAAC
AAGAAAATTGAGACGGCTTGCAAAAGCAAGTTAACACAGCTGACAAACAA
AGTCTAATCCTATCGGCTGTAAACTCGCTTCAACAGCGAACCCCGTTCAT
AAGTTTTATTTTGGCTTTGATCTTATTCCTTTAGTGACTTTCAATAACAc
agatgagctggagtttttataagattctttaataattggtcatttgaagt
aataaaaatgacgcattctttagaaaaagtaacaaaattattttattact
ggttaacgaccaaccaaatcgaataaaagcttgtaaaaacttcatctcGT
CCCCAATAACATTTCGAATATAATAACATTTAACATTTTCATTTAGAGAC
AACCAACCATTACAGTGTGCCCCAAAAAATGCAGacaactttttataaaa
gtaaAACTTATGTGAAATTCTATGACTTGTTTCCTTAGGTATTTCAATCT
CTAAAACTTATTCAATCATCTTAGTAATTGAATATAtattgattgaacag
agaattttaaaatctaatttcaatTGCATACCGtggcgaatctaaaaata
gagattaatttttctgtttgaccgaaattctatcccatcaccctttgcgT
TAATTACGCTTacacgcaaattacactcaattaaaaataaaaaataaatg
actttcaagacttttgaattaagacgaaaaggattgtgggattgaatttc
ggtcaaatgggAGATGAAATAATGATGACGTTTGCATAACGAAGCGCTAT
TATTCTAAGCCCAGTTTAGATATTGAagtttgaggattttactttatata
aagaTTTATCCgctttttttttgggacacactgtatttgTAGTGGAACAT
ACCTAGGAGCAAGAAGGGTAGAACACTGTGGACGGGTGTTGAAAAGAGTT
GGAATGCACTTGATAATCCATAAGCAATACCAATTGCAAGGCCAATGTTC
AAAACACCACACAATGCTAACCAAAcctatcaaaaaagaaatttgaatga
gTGAATTTGGACgaaatggagtttttacaaattCTAActagtaataaaac
aattttaatactttttctaaagaatgcgtcatttttattacttcaaatga
ccaattattaaagtaacAATGCTTACAACTCCATCTCATCCGAGTGAATT
AGAATCTTATGTCAAAGATCGGCAACATGGAAACAGTATTTTCTTAAGAT
TTTTTCCAATGCCAAGAAAATTGTAAATTGAAAAAAAATCGTAGATAATG
ATGCATCTGATATTATTCAAAACAGTTAATACCATTCTCGTTCGACCGAT
GTTAGATGCATGCGTTACATTATATATGTAGATAATTTTAGAAATAAATA
AAAAGTTTATCATAACGTGGGTATCTATGAATAAAATTGTTAACATCTTT
AAACCTATCGTTGATACTAGGCTTTTAGGGGCGGTTCAAAACTAGGGGGG
TGTTCCTGTACCACCCCTTAACTTTTGATCTAGTGGGTCTTTTTGGATGA
AATCTTGGCACACAAGATCTTTGTCACATAAGGTAACTTTTGACAAATAA
TTTTTTTGATGACGTCACTCACCATGCCCACAGTGATCAAAAACCGAGAA
TTTCCTTTGTTCTTACAAATAGCTATTGTTTTCTAACAAAAGCTTTAAAA
AAGTTCCCTGAGTCTAAAATGCTTATTTTTATCCTAAATATTCAATAAAT
TACGGTTTAAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073392-exon-scaffold_91-1491911889:338960..339597 | TCONS_00073392-exon-scaffold_91-1491911889:338960..339597 | Clytia hemisphaerica | exon |
| TCONS_00073392-exon-scaffold_91-1510915933:338960..339597 | TCONS_00073392-exon-scaffold_91-1510915933:338960..339597 | Clytia hemisphaerica | exon |
| TCONS_00073392-exon-scaffold_91-1575043694:338960..339597 | TCONS_00073392-exon-scaffold_91-1575043694:338960..339597 | Clytia hemisphaerica | exon |
| TCONS_00073392-exon-scaffold_91-1491911889:340808..341672 | TCONS_00073392-exon-scaffold_91-1491911889:340808..341672 | Clytia hemisphaerica | exon |
| TCONS_00073392-exon-scaffold_91-1510915933:340808..341672 | TCONS_00073392-exon-scaffold_91-1510915933:340808..341672 | Clytia hemisphaerica | exon |
| TCONS_00073392-exon-scaffold_91-1575043694:340808..341672 | TCONS_00073392-exon-scaffold_91-1575043694:340808..341672 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_91 | supercontig | scaffold_91:338960..341672 + |
Blast
The following BLAST results are available for this feature:
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