TCONS_00073375 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073375
Unique NameTCONS_00073375
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073375 ID=TCONS_00073375|Name=TCONS_00073375|organism=Clytia hemisphaerica|type=transcript|length=294bp
CGCTCAATCATGTTTTTCACTAAGGACCCCTTGTTTCTCTGACAACTTTT
GATTCGATTCTCCTTCAACATGGAGATTAGTTTCTGAGCTATTCATAGAC
GGGCTGATATAAATGTAGAGCTCTTCGTGTGACGCGTTGGATAAAGATGT
CATGCTGTTCGCCAGCAAGGATAGAATCTCATTGCGCATGTTTACAGCGA
TATCTAGCGTATTACTACTCGTTGAGGTAGCGCTTTTTAGTGTTTCTTGA
TGTGTTGAAGAGAGAGTGGCTTTCTTTCGATGAAACGGCACACA
Run BLAST on NCBI

transcript from alignment at scaffold_90:178637..178930

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073375 ID=TCONS_00073375|Name=TCONS_00073375|organism=Clytia hemisphaerica|type=transcript|length=294bp|location=Sequence derived from alignment at scaffold_90:178637..178930 (Clytia hemisphaerica)
TGTGTGCCGTTTCATCGAAAGAAAGCCACTCTCTCTTCAACACATCAAGA
AACACTAAAAAGCGCTACCTCAACGAGTAGTAATACGCTAGATATCGCTG
TAAACATGCGCAATGAGATTCTATCCTTGCTGGCGAACAGCATGACATCT
TTATCCAACGCGTCACACGAAGAGCTCTACATTTATATCAGCCCGTCTAT
GAATAGCTCAGAAACTAATCTCCATGTTGAAGGAGAATCGAATCAAAAGT
TGTCAGAGAAACAAGGGGTCCTTAGTGAAAAACATGATTGAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045529XLOC_045529Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073375-exon-scaffold_90-1491911889:178637..178930TCONS_00073375-exon-scaffold_90-1491911889:178637..178930Clytia hemisphaericaexon
TCONS_00073375-exon-scaffold_90-1510915933:178637..178930TCONS_00073375-exon-scaffold_90-1510915933:178637..178930Clytia hemisphaericaexon
TCONS_00073375-exon-scaffold_90-1575043694:178637..178930TCONS_00073375-exon-scaffold_90-1575043694:178637..178930Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_90supercontigscaffold_90:178637..178930 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.471326	0.461119	1.12274	0.8872	7.49259	7.01447	10.8743	9.9936	2.53044	5.26748	3.3222	2.30009	2.12736	1.52199	1.56247	2.24208	3.09755	6.48273	2.41486	1.76683	1.43187	3.90534	3.12854	0.797756	1.14159	0.609166	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073375 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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