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TCONS_00073373 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073373
Unique NameTCONS_00073373
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length282

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073373 ID=TCONS_00073373|Name=TCONS_00073373|organism=Clytia hemisphaerica|type=transcript|length=282bp
AGAAAGGTCAACTTCGTAAAATGTTAAACTTCGGAATGATTTGCCGTCAC
TCCAACGATCTACCATCATGACTGGATGCTGCgccatttcaaaacaaaaa
catttaatttgaaGTGCTAAAAAATACCAAGAGACAAATTTGTGTGAGCC
GAGAAATTAACGACATAAAGATACGGATTGCGCTTAATTGGTCAATTAAT
TTTCTGGGCGTGCGATGGAAGTGTGAATAATAAAACTCATCAACCAATCA
TTAGTTTTTGCACGTAATTTTTTGTGGACGCT
Run BLAST on NCBI

transcript from alignment at scaffold_90:114675..114956

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073373 ID=TCONS_00073373|Name=TCONS_00073373|organism=Clytia hemisphaerica|type=transcript|length=282bp|location=Sequence derived from alignment at scaffold_90:114675..114956 (Clytia hemisphaerica)
AGCGTCCACAAAAAATTACGTGCAAAAACTAATGATTGGTTGATGAGTTT TATTATTCACACTTCCATCGCACGCCCAGAAAATTAATTGACCAATTAAG CGCAATCCGTATCTTTATGTCGTTAATTTCTCGGCTCACACAAATTTGTC TCTTGGTATTTTTTAGCACttcaaattaaatgtttttgttttgaaatggc GCAGCATCCAGTCATGATGGTAGATCGTTGGAGTGACGGCAAATCATTCC GAAGTTTAACATTTTACGAAGTTGACCTTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045527XLOC_045527Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073373-exon-scaffold_90-1491911889:114675..114956TCONS_00073373-exon-scaffold_90-1491911889:114675..114956Clytia hemisphaericaexon
TCONS_00073373-exon-scaffold_90-1510915933:114675..114956TCONS_00073373-exon-scaffold_90-1510915933:114675..114956Clytia hemisphaericaexon
TCONS_00073373-exon-scaffold_90-1575043694:114675..114956TCONS_00073373-exon-scaffold_90-1575043694:114675..114956Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_90supercontigscaffold_90:114675..114956 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 7.41703 4.76006 3.86491 18.104 10.2335 13.3132 20.6023 4.02928 5.46405 6.17945 1.63374 1.81333 3.0746 0.981604 4.88131 0 2.45391 5.59113 0.859734 3.52908 0 10.3698 2.26891 4.65467 8.28009 1.79657 1.46428 5.7842 0.846798
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073373 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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