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TCONS_00073354 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073354
Unique NameTCONS_00073354
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3099

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073354 ID=TCONS_00073354|Name=TCONS_00073354|organism=Clytia hemisphaerica|type=transcript|length=3099bp
gttttgtttttttgatatTGTAAATAAGAGAGAATAATGTAACAACGTAA
CGAGTAGGATTTCTTCATAAACAAGAAATGTCTGGAAGCTTATCGAATAA
AAACTTTATACTATTCCAAGCTTTGCATAAGGTTATGCAAGATGACTCGA
TTACAATGGAGAAAGATTCTAAAGTGAATAGCTACTACCATAACACACAA
GGCAATGTTCATGACAATTACGCGAAACGCCCCACACCAACCAAAGAACG
AAATATCATCGACGAACCGTTTAAACCCAGTGAAAGTAACCAcaaatatc
aaaacaataataacaacaataacATTAATCGATTTTTCGATCGTCCAGCT
CCTCATCTGGACCCACTTAAAGGTCGTGAATATGCGCATCCCTCGCATGT
CTACGAAAATAAACGTCGTGAATTAGACTCGAAAGTCTTCGATACTTCAA
GGCATCCTGCTTTATCGTCAACTAGAGATCATTCACCTCATCGCTACGAT
CCACGATACCCTACATCAAGAGACGAGCTTAATAATAGACTATCGGAACC
ACCTCATTTAAGAGTTGAAACTGCGGAAGGATTAGCTAGCGGTTCAGCTC
TTTCTCCAAACAGAAAACGTCCACGACCTGGACCTATTATAATACCTCCG
GCTGTTAACAACCGGTCAATACCAACCACCATCTCTCCTTCTCGTCATTT
CGCTGCGTTTCCGAAAGGAATTTACACTCCACCTGCCATGTTGAGTCCGC
GAAGTATTTTCTTTAATCCACCCTTCAATGCACCGAGACACCATCCCAAC
GCCCCACATACGCCAGGGCGAATGCAGTTATCCAAAAGGCGTTCTTCGAG
TTTCAACGAACCACAACCTCTCAACACATCTCAACAACAACTCCAACTAA
AACAACTCGAACAACAACAAATTCAACAACAGCAGCAATCTGTTGTACAG
CAAACGCCGAAACAAACAACACCTGTCTCTGCTGAACCTTCTACTGTGAC
ACCCACAAACGAAGAGGAAATAAACGTTACAACTGTCGCTTCTGACCCAA
CTGAACCGAAAATCAATGTTGGGCCAGAGTTTCAAGCAGTTCTTCCTCAT
GTTTTAAATCGAACGGAAGCACAGAAAGACAGTCACCGTGCATCTCTGAT
GTGGTCACCTCTCAAAGAAGATGaacaaaagcaaaaagaagTTGAAGCTT
ACTTAGACATGGCTTGTTCTCTCGTCTTATACGGTGGATCGAACAATAAA
GAATATGCTTTACATATCTTACAAAGGACACGTGGTAATGTCAAGGAAGC
TGTAAGGCTGCTTCTTTCACGGAGACATATTCTACGAGCAGACGATCCCA
ATGCAGATTATCATTACTCCGGATCAGTACGCTGGACGGCCAAAGAAAGG
CTTGCATTCAGGCAAGCTTACAGATCGAAAGGCAAAATCTTCATGGGTAT
TCAAAAAGAGGTTGAAACGAAGTCTGTACAACAATGCGTGGAGTTCTATT
ACCTTTGGAAAGCAATGCATCCTGAGAGCTTTCGAGCTCGCACGCGAATG
GTTGAAGTGGAATCAGAGCAGGACGACGAAGAAGTTCCTCCAACTCCAAC
AGCAGCTGTTGCACCGCTATCCACTCTTCGTGAACCTGTATTCGAATGTG
ATTATCCTGAATGTCGGGCACGCTTTGTTTCCAGACAAGCGCTCAATGGT
CATATTCGAGTTCATGGTGGAAGTTTTACAAAACCATCGGATACGCGACG
AGCAAAAACGAAAGCAGCAGATGGCTCCTCACCTCGTCCTCCCGGTGATG
GCTTACCAAGTCCGCCCAAGAAAAAGAAAGTGGCGGCGCCCGACCCCTCC
ATTATCATCACGAACACGAGTGAAGGCCCTCAACAGCAGTTCCAATGTAA
AGTGTGTGGAAGGGTGTTCAGCAAAGTGAAAAGTCGATCAGCGCACATGA
AAACTCACGTTAAGAGGGACGAGAACAATAAACCTATCAAATCAGCGAAA
GCCACTGCAAAGCAAAAGCAAaaacaactacaacaacaacaacgacagca
gcagcagcagcagcagCAACTTCAACAACAATTTGGTGAACATTCAATGC
CGCCCTACCCGCCGCAACCGACACACCCTGGTCCACCCCAACCACCCTCA
AATCTAAATCCAATGACTGTTTTTGCACATGCGTAAAGTTTATTTGTtat
ctttatttaattttcttttgttttttttaatatccatattaataattttt
ttattataaacatagaaaaaataatttaaattattatatcttatatcttt
ataattttttacacCACTCTTTTCATGAAAAGATGCTTTTTATCCAACTT
TAGTAGTCCCAAGATAAACCAAGCAAATAAATTAAAAcaatgctaaaatt
ttcaatgaaagaaaattttttaatagaCAATTATTTACAGTagcaaataa
ttttaaattatttggaTTTTATTGATCacttttttggttgtttttgtata
ttattttgaaatctatttgttttacttttttttggtttttctatcCACTT
ACGACAACtcgtttaatattttaataattattattttaaagggAAAAAGC
TACGTGATATTATATTGTTAATTTTTGTGCTGCGCTTTTATTATTGTAAA
TTTTCGTAAATGAATCTATAGGAGTTTTTTTCTCTCAAGCAGCAGTATTT
GTTTTAACAGTAGTTAGTTTGCAACATTCCTATAAGAGTGAAACCAAGAA
AGTCATTTTTCATACCTCACCAAAGTcactaaaattttcttttcagtgTT
TTACAAGCCGTTTTGTGATAAGTAATTGAGATGAGCAAATTTATTCGTGA
CTAACGCTAAACAAACTAAATATTATGTTTTTGGTCTTTGTGAATGAACC
ATTCGTCCGGCATCGCGCCTTTAAGGAAACATAAATGCTTAGTTTTTTGT
CAGTGAATGTtatggaaaaaagataatagatACATTTTTCGCGACACTTA
TTGTATTATATAcattattaaaaattattttacgaGTAAAAATATAGTAA
TAATTATTAATTAATGACGATACTCTTAAACTGTCATCTTGGTTCATCT
Run BLAST on NCBI

transcript from alignment at scaffold_90:75062..81843+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073354 ID=TCONS_00073354|Name=TCONS_00073354|organism=Clytia hemisphaerica|type=transcript|length=6782bp|location=Sequence derived from alignment at scaffold_90:75062..81843+ (Clytia hemisphaerica)
gttttgtttttttgatatTGTAAATAAGAGAGAATAATGTAACAACGTAA CGAGTAGGATTTCTTCATAAACAAGAAATGTCTGGAAGCTTATCGAATAA AAACTTTATACTATTCCAAGCTTTGCATAAGGTACTGTAACTTTCAGTTG CGTGTCAATTCTTGCATTTTCAATGAATTGAGATCTTTGGCAATTTaata cttcatactgtttttaaaatactttcattAACTTTCTCTCTGTCAGATAC TTCTAGTCTTTGTTTAGAATTCCACTGAAGCTTTTTAACAGTTGAAATTG TCATAGTGTGATGATGAAAACATTTAAGAAGCTTTGCTCCTGGTCGATTT CTTTGGAACTTCCTTAATGTGTTTATACAGTTCTTGGTTTCTCTTTCTGG AAGCAAAACATGGTTGGAAGTCGTCAGTCAAAACGTTTAAATTTTCTGTA CGTTTTAGGTTATGCAAGATGACTCGATTACAATGGAGAAAGATTCTAAA GTGAATAGCTACTACCATAACACACAAGGCAATGTTCATGACAATTACGC GAAACGCCCCACACCAACCAAAGAACGAAATATCATCGACGAACCGTTTA AACCCAGTGAAAGTAACCAcaaatatcaaaacaataataacaacaataac ATTAATCGATTTTTCGATCGTCCAGCTCCTCATCTGGACCCACTTAAAGG TCGTGAATATGCGCATCCCTCGCATGTCTACGAAAATAAACGTCGTGAAT TAGACTCGAAAGTCTTCGATACTTCAAGGCATCCTGCTTTATCGTCAACT AGAGATCATTCACCTCATCGCTACGATCCACGATACCCTACATCAAGAGA CGAGCTTAATAATAGACTATCGGAACCACCTCATTTAAGAGTTGAAACTG CGGAAGGATTAGCTAGCGGTTCAGCTCTTTCTCCAAACAGAAAACGTCCA CGACCTGGACCTATTATAATACCTCCGGCTGTTAACAACCGGTCAATACC AACCACCATCTCTCCTTCTCGTCATTTCGCTGCGTTTCCGAAAGGAATTT ACACTCCACCTGCCATGTTGAGTCCGCGAAGTATTTTCTTTAATCCACCC TTCAATGCACCGAGACACCATCCCAACGCCCCACATACGCCAGGGCGAAT GCAGTTATCCAAAAGGCGTTCTTGTAAGTGTCTGATTACATATTTTTAGT TCCCctttttttcttgcttggaAACGAAGCTTTTTTCCTTCCCTGGTTGA TTGTCGCGTTGCAAAAATTACTCAAACATACGTGCAGGAAATGGACGATT TATACTATGATTATTTAGTCATTTGAGGTCGCCGCTtggattttaaaatc tttaaaaggaaCCTCAACTTCCGcttttgcattttctttttctggctttt ctagcatttttttcTTGCATGATCAGCTTACGGATAGAAAATGTTTtgac gaaagtgaaagtgcacGAGTTCCGAGCTCATTAGGATGTAAAAAAGCGTA GAAATATCCTTGCAAACACGGGCCATTTATTCAAGGCACTCACTTTATTC GGGATTGAATATAGGTGATACATATTACAACGAGCAATGATTTACTTCAT TTTCAGCGAGTTTCAACGAACCACAACCTCTCAACACATCTCAACAACAA CTCCAACTAAAACAACTCGAACAACAACAAATTCAACAACAGCAGCAATC TGTTGTACAGCAAACGCCGAAACAAACAACACCTGTCTCTGCTGAACCTT CTACTGTGACACCCACAAACGAAGAGGAAATAAACGTTACAACTGTCGCT TCTGACCCAACTGAACCGTAAGTATCTTACTTTTGTTGGTATCCATGGTA TTTGTTGGTATTAatgttttcccttttttccctCTCTGAATAATATGAAA ATGATCTCAGGGCTTTATCAAAGTAAATGgtgttaaaacattttttttcg atcgAGAGGTCacgtagactagagtctacttctggctgaactttgctttt tgataattttttcatgacgctgagtccagtcaagtagactaggagcattt ggcgaggtcgccattttgaaaaaaaaaattaaaaatccaaataacaataa aactacttggagttgaaggatataatcaaaaataagaaacaaacacgatt aacagatttgtaatcccttattctcaaataaaaatattgcttcatactgt ttttaccttccaaaaacaactaaaatctggcggactgttttacagtccgc ctaggcaaaagcatattaccatatactaccgggccacttatcagcaccaa aaagtccataaaaaagctctaagtggaccccgggctagagGTCACGGTGA TAAATTCAAATTGGACTTTCGTCTTCTAGTTTAGCCTGTACCACTCCGCC CACGGGCgttatttatattttgaaaaaacttgccgTTATCTTTTCGgtca gcgaagaagagtttggtacaggctactTCTAGTTGTGCCAAGCTAGCTTC ATGTAATTTAACACTGTGGAATTTAATATACTATAAGGAGAATTCAATTA TATGTATCCTGTGTCAACATGACCTGGATACAAGAATTTCAATAATGTTG TTATTTTGTATGGGGATGGAATTCGTGTATAATATCTTTCACACAGGCCA ATAGTCAGGTTAAGTTATTTGTCTCACTTTTCATGATTGGTCTTAATTAC TGAACAGTTATGTTATCAAACTAGCTTATGTCGCTTTCTACAGGAAAATC AATGTTGGGCCAGAGTTTCAAGCAGTTCTTCCTCATGTTTGTAAGTATAT TGCTAGTTTGCCTGAAATTTCAGTATTTGATCAAATGATACAACTCCCTC TTTAACTTAAAAGCTCATATATACTCACATTGGGTAACTAACTTTGATTT AACCTCGCATATCGCAGGCTCCAAAGAAAATAGCTTTTAACTGTCTAAGT GTTGAATGCCCCTTGACTCATAAAAGTCACCATTGGCAATATAGATGACG AGGATGTGATTTTTTGATAGCTAAGAATGACATTATCGTATACCTTTAAT CGATTTTCTTGTGTCCTATGTTTAGTAAATCGAACGGAAGCACAGAAAGA CAGTCACCGTGCATCTCTGATGTGGTCACCTCTCAAAGAAGATGaacaaa agcaaaaagaagGTAAGATTTCTTTTGGTCAACTTGATGCAGGCTGTTGA ACCGATTTATTTcgaccaacgatgtaaaaataatagataaccaacttgct tgtggtacctttatcttttgaaaaaaaatccaaaatttgcagtaaataac aattcaaatattctatcaattcagtggatgtcaaaaagtgtgtcaaaatc tagctaaaagcattacacgcactgcacacagagctttttaatagagtgct catttcaataggaaaacaatggttgttctcttgggagaagtgccttctag aggtagttggttatctattatttttacatcgttgttTCGACTAAATCTCA CTTTGGTTTCGCATAATAATTAGTCAATTTTTCTCCACAAAATACCTGAT TTGAAACAAATCTGAAGAAGACCAATAGACCAAAAATTTGATGGCTGTTA ACTTAAAAATGTTTGACCCAAAATATCATGCTTGTTTCTTTTCGTTTCAG TTGAAGCTTACTTAGACATGGCTTGTTCTCTCGTCTTATACGGTGGATCG AACAATAAAGAATATGCTTTACATATCTTACAAAGGACACGTGGTAATGT CAAGGTAATAATGACATTTTCCAAACCCCTGAAGGAAGAATGAAACGTAT TCCATGAGCTTCTTAGTGTCAGACTTTTTACTTTctattgaaaaagaaga atggggaaaagcatttttttaataCTTCGGGGTTGTATAATAGTTATAGA AGAATGCGTTaaagtttgagatttttttcaattttcaaagaaatcttttt tgttacACTTGGAAATTcatgtattttttttattattttaaccCTTAGGA AGCTGTAAGGCTGCTTCTTTCACGGAGACATATTCTACGAGCAGACGATC CCAATGCAGATTATCATTACTCCGGATCAGTACGCTGGACGGCCAAAGAA AGGCTTGCATTCAGGCAAGCTTACAGATCGAAAGGCAAAATCTTCATGGG TATTCAAAAAGAGGTATGGATGAACGGCTTTATATCCAGAATATTTACTA CTAAATCACGACAGGGTTTTGGTTTTTGAAATTATGACAGTGTTTTCAAG ACGAAATATCTAGACACGTGAGCGTTCACTTACcctttctctgatttttt attCAGGTTGAAACGAAGTCTGTACAACAATGCGTGGAGTTCTATTACCT TTGGAAAGCAATGCATCCTGAGAGCTTTCGAGCTCGCACGCGAATGGTTG AAGTGGAATCAGAGCAGGTATTATTTCCTTTGTAAATTCAAATCGTTTTT TGAAAGCTGTTGTACACAAGACTTGCAAGGGAAGAGTTCTTATTGTTTGG TCtaatttgctttttatatgCAAATACTTTCAAGAGGTATTTAGGTTTgt ctttatctttttctttctcgactgattttatttttttgaggcATCCTAAA TGTTTTACCTTTGTATGTTTTGTTGTCTAGGACGACGAAGAAGTTCCTCC AACTCCAACAGCAGCTGTTGCACCGCTATCCACTCTTCGTGAACCTGTAT TCGAATGTGATTATCCTGAATGTCGGGCACGCTTTGTTTCCAGACAAGCG CTCAATGGTCATATTCGAGTTCATGGTGGAAGGTAAGACATAAAATTGAC GACagtattataaaaagaaagccAGCTTTATTTCATTGGCATTTTTGCTT GAATTTGAACCATTAGGAGAAATATGAGTAATTCGCTTAAATCAGAAATT AGACTTGCTTACCTATTTCCCCTTGTACCTTGCGgatttcttttaattta ttctTTACTTTTACAGTTTTACAAAACCATCGGATACGCGACGAGCAAAA ACGAAAGCAGCAGATGGCTCCTCACCTCGTCCTCCCGGTGATGGCTTACC AAGTCCGCCCAAGAAAAAGAAAGTGGCGGCGCCCGACCCCTCCATTATCA TCACGAACACGAGTGAAGGCCCTCAACAGCAGTTCCAATGTAAAGTGTGT GGAAGGTAAGAATATACTCGAGGAGTATCAAGATTCTCCATGGAGATGAT TAATGTTTGTCCTACTTCTTTGACCAATAAGAAAGCGATTTTTCCTCATC TTAAAAATTAACTTGAATGGGGGAGGTcattttcccgaaaattttttttt gatactcTCAACTACAGTTGAACTAGAATCTGAGattgtctgtctgtctg tccgtCTGTCCGCCAAAAACTTTAAGGTGACAGCCTGGAGTCTTctaaaa tggtcggatttggctgaaatttggcacacttaagtgaatatctgggggta ttattttttatttttcaaaattttggctgGGCACTAatcttttggtttgt tttgctaCACTTGGgtctatgaataatttgaagctactgaagttgagccg TTTGACTATGTGATATTTAaccaatttctttcttttctttatcaGGGTGT TCAGCAAAGTGAAAAGTCGATCAGCGCACATGAAAACTCACGTTAAGAGG GACGAGAACAATAAACCTATCAAATCAGCGAAAGCCACTGCAAAGCAAAA GCAAaaacaactacaacaacaacaacgacagcagcagcagcagcagcagC AACTTCAACAACAATTTGGTGAACATTCAATGCCGCCCTACCCGCCGCAA CCGACACACCCTGGTCCACCCCAACCACCCTCAAATCTAAATCCAATGAC TGTTTTTGCACATGCGTAAAGTTTATTTGTtatctttatttaattttctt ttgttttttttaatatccatattaataatttttttattataaacatagaa aaaataatttaaattattatatcttatatctttataattttttacacCAC TCTTTTCATGAAAAGATGCTTTTTATCCAACTTTAGTAGTCCCAAGATAA ACCAAGCAAATAAATTAAAAcaatgctaaaattttcaatgaaagaaaatt ttttaatagaCAATTATTTACAGTagcaaataattttaaattatttggaT TTTATTGATCacttttttggttgtttttgtatattattttgaaatctatt tgttttacttttttttggtttttctatcCACTTACGACAACtcgtttaat attttaataattattattttaaagggAAAAAGCTACGTGATATTATATTG TTAATTTTTGTGCTGCGCTTTTATTATTGTAAATTTTCGTAAATGAATCT ATAGGAGTTTTTTTCTCTCAAGCAGCAGTATTTGTTTTAACAGTAGTTAG TTTGCAACATTCCTATAAGAGTGAAACCAAGAAAGTCATTTTTCATACCT CACCAAAGTcactaaaattttcttttcagtgTTTTACAAGCCGTTTTGTG ATAAGTAATTGAGATGAGCAAATTTATTCGTGACTAACGCTAAACAAACT AAATATTATGTTTTTGGTCTTTGTGAATGAACCATTCGTCCGGCATCGCG CCTTTAAGGAAACATAAATGCTTAGTTTTTTGTCAGTGAATGTtatggaa aaaagataatagatACATTTTTCGCGACACTTATTGTATTATATAcatta ttaaaaattattttacgaGTAAAAATATAGTAATAATTATTAATTAATGA CGATACTCTTAAACTGTCATCTTGGTTCATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045513XLOC_045513Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073354-exon-scaffold_90-1491911889:75062..75192TCONS_00073354-exon-scaffold_90-1491911889:75062..75192Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:75062..75192TCONS_00073354-exon-scaffold_90-1510915933:75062..75192Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:75062..75192TCONS_00073354-exon-scaffold_90-1575043694:75062..75192Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1491911889:75520..76234TCONS_00073354-exon-scaffold_90-1491911889:75520..76234Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:75520..76234TCONS_00073354-exon-scaffold_90-1510915933:75520..76234Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:75520..76234TCONS_00073354-exon-scaffold_90-1575043694:75520..76234Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1491911889:76668..76878TCONS_00073354-exon-scaffold_90-1491911889:76668..76878Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:76668..76878TCONS_00073354-exon-scaffold_90-1510915933:76668..76878Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:76668..76878TCONS_00073354-exon-scaffold_90-1575043694:76668..76878Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1491911889:77805..77851TCONS_00073354-exon-scaffold_90-1491911889:77805..77851Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:77805..77851TCONS_00073354-exon-scaffold_90-1510915933:77805..77851Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:77805..77851TCONS_00073354-exon-scaffold_90-1575043694:77805..77851Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1491911889:78137..78223TCONS_00073354-exon-scaffold_90-1491911889:78137..78223Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:78137..78223TCONS_00073354-exon-scaffold_90-1510915933:78137..78223Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:78137..78223TCONS_00073354-exon-scaffold_90-1575043694:78137..78223Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1491911889:78712..78815TCONS_00073354-exon-scaffold_90-1491911889:78712..78815Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:78712..78815TCONS_00073354-exon-scaffold_90-1510915933:78712..78815Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:78712..78815TCONS_00073354-exon-scaffold_90-1575043694:78712..78815Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1491911889:79060..79224TCONS_00073354-exon-scaffold_90-1491911889:79060..79224Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:79060..79224TCONS_00073354-exon-scaffold_90-1510915933:79060..79224Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:79060..79224TCONS_00073354-exon-scaffold_90-1575043694:79060..79224Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1491911889:79368..79478TCONS_00073354-exon-scaffold_90-1491911889:79368..79478Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:79368..79478TCONS_00073354-exon-scaffold_90-1510915933:79368..79478Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:79368..79478TCONS_00073354-exon-scaffold_90-1575043694:79368..79478Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1491911889:79692..79843TCONS_00073354-exon-scaffold_90-1491911889:79692..79843Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:79692..79843TCONS_00073354-exon-scaffold_90-1510915933:79692..79843Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:79692..79843TCONS_00073354-exon-scaffold_90-1575043694:79692..79843Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1491911889:80028..80216TCONS_00073354-exon-scaffold_90-1491911889:80028..80216Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:80028..80216TCONS_00073354-exon-scaffold_90-1510915933:80028..80216Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:80028..80216TCONS_00073354-exon-scaffold_90-1575043694:80028..80216Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1491911889:80657..81843TCONS_00073354-exon-scaffold_90-1491911889:80657..81843Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1510915933:80657..81843TCONS_00073354-exon-scaffold_90-1510915933:80657..81843Clytia hemisphaericaexon
TCONS_00073354-exon-scaffold_90-1575043694:80657..81843TCONS_00073354-exon-scaffold_90-1575043694:80657..81843Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_90supercontigscaffold_90:75062..81843 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.525714 0.424804 0.112138 0.157591 14.133 7.00198 7.56379 9.38577 13.6414 14.5666 7.10547 13.181 5.72882 3.29475 7.49217 8.01574 2.62707 3.57409 5.53561 3.23474 2.33397 2.16139 5.22119 4.76379 2.33607e-08 0 13.338 6.39759 6.76395 3.76452
Blast
BLAST of TCONS_00073354 vs. Swiss-Prot (Human)
Match: TREF1 (Transcriptional-regulating factor 1 OS=Homo sapiens GN=TRERF1 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.437e-34
Identity = 75/189 (39.68%), Postives = 114/189 (60.32%), Query Frame = 3
Query:  993 TVTPT-NEEEINVTTVASDPTEPKINVGPEFQAVLPHVLNRTEAQKDSHRASLMWSPLKEDEQK--QKEVEAYLDMACSLVLYGGSNNKEYALHILQRTRGNVKEAVRLLLSRRHILRADDPNADYHYSGSVRWTAKERLAFRQAYRSKGKIFMGIQKEVETKSVQQCVEFYYLWKAMHPESFRARTRM 1550
            TVTP   E+ ++V        EP+IN+G  FQA +P + + +   +D+H+A+L+W P  E E    Q+ VE  L++ CS  L GG  N E+ALH L   +G+V  A+ +LL R+ +     P A+YHY+GS +WT+ ER  F +A  +  K F+ +QK V++K+V QCVE+YY WK +     + RTR+
Sbjct:  765 TVTPGPGEQTVDV--------EPRINIGLRFQAEIPELQDISALAQDTHKATLVWKPWPELENHDLQQRVENLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMVALEMLLLRKPVRLKCHPLANYHYAGSDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRL 945          
The following BLAST results are available for this feature:
BLAST of TCONS_00073354 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TREF11.437e-3439.68Transcriptional-regulating factor 1 OS=Homo sapien... [more]
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