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TCONS_00073311 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073311
Unique NameTCONS_00073311
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2297

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073311 ID=TCONS_00073311|Name=TCONS_00073311|organism=Clytia hemisphaerica|type=transcript|length=2297bp
ACCcttattaaagaaaaaatgtttttggacgGCTAAATgacaaaatcaag
aaaaaatgaaattgacaaCAATAACTTTGCTGGCGTTATTTTGCGCATTG
CATAAATTATCGAACGCTCAACGTAAATTGAATTTCAAGATACCAGGACC
GAAATCACTCAATGACCGGATAGCCATTATAGGAGCTGGACCATCCGGTA
TTCACATGGCACTATTGTTAAAGAAGTTGAAATTTACTGATGTAACGATC
CTTGAAAGATCGAACGATTTTGGTGGTAAATCATGGACAATAGAAAGACG
TGGGGCTCCTCATGAGATGGGCACTGTCTATTTACAGCCTGATTATGAAG
ATAATATAATCTCCTTAGTGAATGAGTATGCACCCGGCGATTTAGTTCAT
TTCCCACCTGCATCAATATGGCTTGATGGGAAAGAGCCTGCAGACTANCA
CTGTCTATTTACAGCCTGATTATGAAGATAATATAATCTCCTTAGTGAAT
GAATATGCACCCGGCGATTTAGTTCATTTCCCACCTGCATCAATATGGCT
TGATGGGAAAGAGCCTGCAGACtataaaagctatatttttcGTTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGCACC
CGGCGATTTAGTTCATTTCCCACCTGCATCAATATGGCTTGATGGGAAAG
AGCCTGCAGACtataaaagctatatttttcGTTACGCCATCCAGCACCTG
AAGACTACAAATATAACTGTCATTAAGAAAGGTTTTTTTGATGCCATCTC
AGGCTATATAAGAATTCATCGTGAACTGTTTGGTGTCTATGATGGTGAAC
ATCTGCCAGAGCTGGTCGAACCAAAGGACAAAGAGAGAGTTGAtaaaact
tttgaagaatttcttgacgatgaaaatcttcaattaTTGAAACCACTCTT
GTACGCTAGTAATTCCGTGCAAGGTTATGGACGACTTGAGGAGATTCCAA
CAATGTACGGAATGACATGGAACACACCAAAAATGATGGGTGTCCTTTTG
AAAAGACTATCTGGTGACAATATTGGAGGATTCTACATGCTGAGAAACGG
TTTCCAAAACCTCTGGAAAAACATTATCGAGAAAGAGGGCCTTAACATCA
AATACAACGTAAATATAATCAAAATTCGACGAAGTGAGAATGACATCTTT
ATTAAAAACAAGGTTGGGAAAAAAGGACCCCGAACATGGGATCGCTATGA
TTTTATAATTTGGAGTCCGGAAATGAAAACAAGTCTCCGGTACTGGGATT
GCCGTAAAGATGAAGCGTACTACTTCTCTCGTACAAGACCAACTTGGTTT
ACAACAGCTTTAGTTGACACACTCGGTGCAAAAAAAGGACCATCTCCTAT
TGATTATTGGGTAGATAATATCAACAAAAGACGTCAAGGTGCGATATGGG
GACAACGTGATTCATATGCTGCTATTCGGAATTACACAGGCCCCGATTAT
CAATCGGGGAAATTTAAATCGGGTAATGATGATTCCCCGATTCGCACTAC
GGTCACATATCAAATGAATGATCGCCGACCCTCACGATTCCGATTGCGAC
GTAAATTGTTGAAGGCTTTACGTGATATCGGCGCAACGAAGATCAATCTA
GTGGTGATGAAGACTTGGAGATATTTCCCTCGGTATAACATCAAAGATTT
ATCAAGGGGCATCTTATGGAGAATCTTGGAGATGCAAGGAAAATACAATA
TGTGGTATATCGGATCCTCTGTGTCTTTCGAAAGTGTCAAATCAGTCGTG
GAGTATAATAAATTATTGGTACATAACTTTGAATTGCCAACAGAGTCGCA
AAATATGAGCCCACCAAGCTAAAATGCTGTTCTAGTGTTCATTTAATTTA
CTTAATTTAAAAAAATGTGGAATAACTTTAAATTGTATTCACTTGTATTT
AATATGGGAATTTTTTTGTttttttttttgtttgtatttattgcttaata
ttattaaaattaattttgaaattgtagAAATTGTTCAAATATTGATACAT
TTAGtcggaaaaaataaaaatcattttaatctCTGAGctaaaaattttgt
attcaaatTCGTATAGGTGATAACACAAGTCTAATGATAAGTAAGGCCTA
TAAACCAGGAAATGGTGCCTTAAAAGATCGAAACATTTATAAAGCTTATa
ctaaacatttgaaaaattgactagAATTTTGAACAAATAGTGCTGTG
Run BLAST on NCBI

protein sequence of TCONS_00073311-protein

>TCONS_00073311-protein ID=TCONS_00073311-protein|Name=TCONS_00073311-protein|organism=Clytia hemisphaerica|type=polypeptide|length=498bp
MGKSLQTXTVYLQPDYEDNIISLVNEYAPGDLVHFPPASIWLDGKEPADY
KSYIFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPGDLVHFPP
ASIWLDGKEPADYKSYIFRYAIQHLKTTNITVIKKGFFDAISGYIRIHRE
LFGVYDGEHLPELVEPKDKERVDKTFEEFLDDENLQLLKPLLYASNSVQG
YGRLEEIPTMYGMTWNTPKMMGVLLKRLSGDNIGGFYMLRNGFQNLWKNI
IEKEGLNIKYNVNIIKIRRSENDIFIKNKVGKKGPRTWDRYDFIIWSPEM
KTSLRYWDCRKDEAYYFSRTRPTWFTTALVDTLGAKKGPSPIDYWVDNIN
KRRQGAIWGQRDSYAAIRNYTGPDYQSGKFKSGNDDSPIRTTVTYQMNDR
RPSRFRLRRKLLKALRDIGATKINLVVMKTWRYFPRYNIKDLSRGILWRI
LEMQGKYNMWYIGSSVSFESVKSVVEYNKLLVHNFELPTESQNMSPPS
Run BLAST on NCBI

transcript from alignment at scaffold_9:296510..308042+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073311 ID=TCONS_00073311|Name=TCONS_00073311|organism=Clytia hemisphaerica|type=transcript|length=11533bp|location=Sequence derived from alignment at scaffold_9:296510..308042+ (Clytia hemisphaerica)
ACCcttattaaagaaaaaatgtttttggacgGCTAAAGTAAGTAAGGTTT TTATCAGAAATTTGCCATGTGAATGATGGAATTTTTTTGCGGGACTTCTA TTCATGCTATTGAGAGAAAACTTTCAATCcttaaaatttctttattttaa attcttgaaaatttgacagtACAATCACGCAatcttttttcccaaattca cacaattttttttaactttcacgcattcacgtaaGTGAAAAAGCTCATCC ATGCATTCGCGCAAACCGCTGGGGCATAGATTATCTAGGTCATGatataa aaatgcaaaaaaatttatctgcTACAGTATGTGGTGACACGAAATTTCTT TCGTGGTTGATTAACTGATAATAAGACTTTTCTTGTCCCAAAATGCaatt caatagaccttatcggagtttttgatttttctgaaaaagcgatgcattgt gggattgtttcgagtgtattacaatagaaaaatcaaaaactccgataaag tCTATTGTAATATAAAAGTAATACAAAAAGTATTGCTCAGTCACATCCAC AAAAGGTGTTCGTATGGGGAACGAAACGAGTGAATTGCAAAATTGTGATA tgtttcccagctggcacataacgttgttttaacgttcatctaacgttata tggacgttgtgaacgttagatgaacgttgaaacaacgttgtgtgccagct gggttggaTCATAAGAATCAGTCAGTGCAAAACAAGGAATAATGTTTGGC TCAATAGAGGATAGAAAGCAGTCAGTGTTTGTCTTTTAGATTTAAGAATA ACACTTTGgagaattttgaatttgaaaaggtattaattttttttcaaata aggaACAAATTCAGAAGCATAATTtacccatagatttataaagcccccCC CCGATGaaagcccgaagggttagatgtcgtgctttaagccatcgcaggca aaaaaaagtgaatatcgcaagaaATATAGTTGCTcttatttttggaaata tctgcgaagcttctgattggtcaaaccatggaggtataaagaaacaggag aagtatgttattataaccaagctcgccctacgattaaaaaagttactatG TATGCATGCTTATAAACTCatatatatcgtgcatttttaataagctcttt tatccatagttgaaatcttattggctcatttaagctttagaaattagatg agacgagattcattgtttctgacattcgcgtaagaaaatatttggactaa aaaaagacctgtaaacttggcaatccttcatcaaatgataagatttttcg atcaatgttttctttaaggtgaactttattacttgatactttcctccaaa attctccagcgactttatgtctacaaattgagtctgaaatcgtgtgtgct tatgaagaactttttattttctggcttgagaaaatatgtttacaaaacaa aatttaacgggTATATAACGAAAttgaacataaacttgtttcgtgaacaa agttttatttaattttcgtatattagaaggctaaaAAATTCGATACTGAT AGTAAGAATATTCAGAGCAAACTCGAGTTctaccaaggatttattataca ctggatatacaagtaacagatttttgNGAGCAAACtcgagttctactaaa aagcctcatttcatcgggcgagctcagaatttcttttgatatattttata taagaaatcaaaagactttaacgactaattaccgacaaattcaactcctg tttttctttatacctctttGGTCaaacgctgaaattctattgtaatgtca cgtgacctaggtaggatttccaatgtagtataagcccgaagggctggaAT CGAATCTCCTAGGTAGGATtcgagcggctcgcctggtttttacacaaatg acagattgaaactaaaatttaccgctaaatttaaataaaaatatcaattg taaacaaaggaattgctggatccaatctgtcgtcaaaaatacggcacatt ttttaaggcttcactttttcttgcctgagaaaggttagagattctactct agcccttccggctttaaactcaatgaggatttcctacctaaccacggcac acttttcagcaaaacgACGACCCAATACATTAAGGGGACATAGTATACTC TGTGGGCTTAGTATGCTACGGTTAAACCCGACTAAATTGGTAGTCGAATT TAAGttgattttacaaaatgaaaattttcacactTTAAGATCGAAATGAT TTTCGAAACCACTTCTAATTAAAAATTCCAAAACTCTTTGAATGTTAACA ACCTTGACTCCGGAGATCAAAACAAAACTCATCAACAACTTGAACCTTTT AGTTGCAAAGTTGCAAATATCTTCAAAATCTAAAGGAGTATTTATATATC GGCAAGGTTCTGAGGATTTTTCAGGTTTAGAAGAAGCCTCGTTATCCAGG CggtaaaagttttaaatttttagtttacgGCCTGGTTTTCCTAAAGCGAT TTGCATTTTAAAATCGGAAAGAAGAAAATGtgcaaatattttgcgtgaag CTTGAAGTTTAACGACCCTGGGTTTACATGAATTTAGGTATAGCTGTAGA TGTAGAGAATAcatgtttttcataagaataaactatGTATTAGTTATCGC ACAGTGCAGAGTGCAATACGGGATTCATTTTTCgagttcttttatttttt gctcCTTATTTTCACGAGCGAGTGATaataacagcaaaaaaaaaagaacg agtTTGGTTTATCGCAAGACTTGAAAAATctactttctttttttatttct caaagaaattgacgtcaaaaaatgaagCTGTTGCATTGATCAGTGCAATA AATGAAGCGCAACAGTGACAGTGCAAATAAAAACGAACAGTGCAACGTTT ATGCACTGTAAtgtaaccaatcagattgcagatattttacATGTAATGCG ATaaataagaatataaggcttcgatggccaaaatgttaagaacaagttaa gaacattttgaggctttggggactctaaaacacctaatttcttaggaaaa tgcgAGTTGAATATCCAGGCTAGTTTTGTATCTTCACAGGTTTCGAACGC TGAGACGTTTTGACTCATAGATTGGAATGGCTATAGGATTGACCTAgaac ttttgacttttttaaagattttatttcaacACATTTTTGGCGGTAActta ttgccaccgcagggagcctaaagcgaccgaggatggcattcatagcttta cgcataaggaagttgggaaaacatctcataattttgcgtttgcatttgcg cgtttttcagtattttagttccgcttaacgatAGNCTTACGCATAAGGAA Attgggaaaacatctcataattttgcgtttgcatttgcgcgtttttcagt attttagttccgcttaacggtagcattcttattacggtctctctattgtt ttatcatcttgaaatctcagtttgtctttttcttatccctggagagttaa tgaatctaaggaaatttccttttctgggaaattccctttttataccacaa gtagttattaagcgctcttcattactctactcaaagtattcgaacagtta tgttgctaaacgtgtacattagtaaaataacaaatGAAGAGTATCTTCAG GCATACGCTttttaggaaaaaccagtaagtcatatgattctggctgggct gctcttaattTCATTTGAGTTcttcaggcttaaatgtcaataataatgaa aatggaaacctgtacttctcagtaatttctgaaatctgaggctcagattc tacttaatttgtttttaggttttggccaaatttcagcctcgtattcttat gaaggcacggatgtcactctaagtagactgtaaatcactcccttgtcACA TTTGtaagcatttgaaagaattttgtctcagatgagaggtcactcttaac aaaaaagatcattccttttgaaagcaaatctaactctatgtgttcgtttt gctgcggtggcaccttaatgaaagttatggttAGTATATTACTTTATTAA AAAGGTGAATGGGCCTTGATGTTGCCTGGCattccaagctcaaaatttta gaaaagtaAGAATTATCTCggcatacaaagttctaaagtTTTAGACGGGA CGATAGAAAAAAATCTAAcaaactaaagtctatttcaaattagctggcag tgttgttttcaaacctcaataacttctgctagaatttgaattaagtagcg attttctgctcgttgaaaagacaaaatGGAGTGGGATATtgtcataaaga aaaaactcaaaataagatcggaaaatgaagattgaaaatgaagaagaaga aaatcaacttctctAATGATTGTGCTATAATTATCAATTTCAcacgagtg attctttgatcttagaacatcattaatgtgaaaagattaaaaaaaaaaat tccaacgaAAGATATAGTCTAGATATATAGAGATATAGTTTATcaatgat tgacttcaaaaatcatcaaaaaacaacaaaaaagagcccttttttaaacc aaccagggcaaagttttaagctgtatcttttgattgaatgaaaagttttt aaatcatttttcgcatttatgacgttctaagattgaagagtttctgatac aaaaatgaagatcatagcaatattctacaagaagttgattttcttcttct tcatttttcatctttgtttttccattttttaaattgttttcttttttgat aatattccactctggattttctttttaacgagcacaaaaccactaactaa ttcaaattctatcgaaagttattgaggtttgaaaaaacactgccagctaa tttgaaatagactttagactgtgaaatagttttggtctggatatccaggc tagccTTTATGAATCAAAATGCGGTTAAGTTTTTATTCACTGCATCCTCA CGCGAGCAAGAAAATTAATATTGTCCGTTGTTAACAGTAATGTTAATGTT TAAGTCTTCATCAAAAGTTGAAAGAACAAACAAACAGTTTAAGAAAAGTC ATGAAGTCTGATGCAATAACAATCAAACCTTCTACTTATGTAACATTCTG AGAGAATATCAAATCGTATCGAATTCCCACCCGAATTGGGTATCACGGTA GGCATGAATGAAAAAAGACTTGACCCAGGATGGTTCGGGGGCGTAATGCA GGGCGGATACACAAGAAACAGACAGGGTCGGAAAATACAATAGAACCCTC GTAACAAGTATTCTTTGGTAAAATTTTGGTAGAAATTAATAAGTTCTAAG TTTTTAGTCCCGTTCTCACATTTTACACTAatctttacagaaaaataaac aatgatCCCCCTGCGTAGGATCCACGGGTCCCTTTATCATGAAGTTTGAT CAAAATATTCCGGGGGTAATTTATTCAGAAAATAGATATCGCCTAATAAT TTGGGTGACatacacgtttttgttttttttaagaaactagttttaccaag cagcctcaatgtttcttaagaaatcgaccttttgagccttaaatgtttct gacatgtttctaaactttgtcaagcttaaagacgcatgtcgataatacaa tagtctaataGCCCCCTAATAGACTAATCtacggtactttcctatcttct atactgattttctgactttttcaagtgtttctaactgttatgtaactatt tttcttgaactttgccttgattggaaggttcttaaaaaaaaaaaaaacga attaaaaaattttattttcttattctcagtctcagcatgtttcttagatg tttcttaatttttagcctcatgttttttaaaagtgtgtttcttaaaaaaa aaaaacgtgtaacacacagaaaaacttcaaggtcaAGTTTTATATTTAAT GTCGTAATACTAAAGAGGGAATTTGGCAATAagtgggttggaaattttta aagCTGTGGCAACACTGAAAACGgaagaataaaaaagtatttgtctgaaa ttttataattttttaatatCTGAACCGATAATATGTCATAGATTTCCTCG AATGATTTTTTATGTACTTTTTGAATAATGCTCGACAATTTATACAACTT TATACAAATTCAACACCCCcatctcacagacccactttTCCATTCCCAat ggaaaattggccaaaatatcgtcaccggtggaaaatcatcctccactttt tgtccccactgaaaaaaaatcGAATAAACCAAGCCTCACTGCAAAAGAAT ATGCTATTTTCCCCATCCCCGCTGAATTTTCTGACTTGAAAACAAAAGAA TTTCAATCCCCAGCCATAAAAAATATGGGAATATCAATCCCCATCGAGTT TCAGTCCGTTTTTTTAACTCCACTGACTGAAAAAATCCTAACGGGTCTGT GAAGAAGGGGGTTTAATTCAGAGTCAAGACCATAATATCTAGGTATGAAC TTTTTTAATACGAAAATTTCAAAGACTATAATAAATACAGTGTTCAATAA GAAGTTATTTTCTAAACTTTAGAAACAAATTTAAGACCACCACTCACACT CAACCTTTCTGTTCTATCATAACTGGTTTAAAACTTTTCGAATAGACTAG GGGGGGGTGGGGTTGGTGGTCCCCTGGAGCCACGAGGAACATTTTAGCCA CGTACTATTTTTTAATAAAATTGTAATTCTACCCGAAGTTTGAACATATT CAGAAGAGCAGAACTCTAGAAAATTGGAGTTAGATATTAGTATTAGGGGT TAGTTGAATTTTCTCAATATGGAAACTACTTTCAGAAATGAAAACTTCTT TTTTGATACTACATGTTTGATTAGCAATTGAATCGTGGGCGTCAAAGCGT TAGACAAATATTACCTCACGATTAACTATCGAAGAAAAAAATTGCATGGA TGTAAAACTTTATGAAGGGAAGGTGATGTACTTCTTTATGATTTATGACC AGATGTTAACCAATGGTTGAAAGAGTTGTTATTTTTAGCTTTCGCTTTAT ATATCTGTAGAATTGTGGATTTACGAGGGAAAGTGTACTCTGTACCAAaa tgtatctcacgattatcgtagcgtatctctacggcaatgaattttcaaat tagccgtagatatcgggtttgtgtacagactagGGAAAGTACGACGTTTC TTAGACATTTCCCATAACTAAAGAAGGAAAAACCCGAAGTAAAAACAGTT TTCTTCTAAATTCTTTGACCACTACTTTTATTTGGATTTTAGTgacaaaa tcaagaaaaaatgaaattgacaaCAATAACTTTGCTGGCGTTATTTTGCG CATTGCATAAATTATCGAACGCTCAACGTAAATTGAATTTCAAGATACCA GGACCGAAATCACTCAATGACCGGATAGCCATTATAGGAGCTGGACCATC CGGTATTCACATGGCACTATTGTTAAAGAAGTTGAAATTTACTGATGTAA CGATCCTTGAAAGATCGAACGATTTTGGTGGTAAATCATGGACAATAGAA AGACGTGGGGCTCCTCATGAGATGGGCACTGTCTATTTACAGCCTGATTA TGAAGATAATATAATCTCCTTAGTGAATGAGTATGCACCCGGCGATTTAG TTCATTTCCCACCTGCATCAATATGGCTTGATGGGAAAGAGCCTGCAGAC TANCACTGTCTATTTACAGCCTGATTATGAAGATAATATAATCTCCTTAG TGAATGAATATGCACCCGGCGATTTAGTTCATTTCCCACCTGCATCAATA TGGCTTGATGGGAAAGAGCCTGCAGACtataaaagctatatttttcGTTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAT GCACCCGGCGATTTAGTTCATTTCCCACCTGCATCAATATGGCTTGATGG GAAAGAGCCTGCAGACtataaaagctatatttttcGTTACGCCATCCAGC ACCTGAAGACTACAAATATAACTGTCATTAAGAAAGGTTTTTTTGATGCC ATCTCAGGCTATATAAGAATTCATCGTGAACTGTTTGGTGTCTATGATGG TGAACATCTGCCAGAGCTGGTCGAACCAAAGGTAAATACTCGTACTTAGT TCCCTTAGATTACTCTATTTCGATTTAGCAGTTGAATGAGGTCTCTCCTT TTGAACAACAGAATATCAAAAGGTTAATTCTTGCGTGGGCTATGAAATTG TTTTAGGCTTTTATCTTGAAACTGTCGGCAACTGAACTGCATATTTTCAA CACAAAGCAACAGCAACAAAAGCTCAAACAggaaatttaacttttattgT TGTCATTCATGTATACTATTCACTCATACAGGACAAAGAGAGAGTTGAta aaacttttgaagaatttcttgacgatgaaaatcttcaattaTTGAAACCA CTCTTGTACGCTAGTAATTCCGTGCAAGGTTATGGACGACTTGAGGAGAT TCCAACAATGTACGGAATGACATGGAACACACCAAAAATGATGGGTGTCC TTTTGAAAAGACTATCTGGTGACAATATTGGAGGtttgtcaaattttagc ttttcTCTACCTTCTTTTGCCCTTCGGAAATCTTTaatgtgtccgaaaaa aataatACAGGTTTTATAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATTTTGACATCA TGTGGTGCTCGTATCATAAGATAAAAATACCTGGTTCGGGCAGACCTTCC ATTAGGATTAAGCTTTTAACCAACTATTCTTTTTTAAGGCAAGTAGGTTT TTTTAGCTAATTCTACCACACTAAGAGCAGGGCGGATTAGTAATGTTCAA TAATTTCCTTCCTGATGAATAATTGTAGCGAAATCGTTTTGAAGCACGTC AACAGTCAATTTCTTTGCAATActgaaatagaaataaaaatgttaCAATA CTTTCTTTTCTTAGGATTCTACATGCTGAGAAACGGTTTCCAAAACCTCT GGAAAAACATTATCGAGAAAGAGGGCCTTAACATCAAATACAACGTAAAT ATAATCAAAATTCGACGAAGTGAGAATGACATCTTTATTAAAAACAAGGT TGGGAAAAAAGGACCCCGAACATGGGATCGCTATGATTTTATAATTTGGA GTCCGGAAATGAAAACAAGTCTCCGGTACTGGGATTGCCGTAAAGATGAA GCGTACTACTTCTCTCGTACAAGACCAACTTGGTTTACAACAGCTTTAGT TGACACACTCGGTGCAAAAAAAGGACCATCTCCTATTGATTATTGGGTAG ATAATATCAACAAAAGACGTCAAGGTGCGATATGGGGACAACGTGATTCA TATGCTGCTATTCGGAATTACACAGGCCCCGATTATCAATCGGGGAAATT TAAATCGGGTAATGATGATTCCCCGATTCGCACTACGGTCACATATCAAA TGAATGATCGCCGACCCTCACGATTCCGATTGCGACGTAAATTGTTGAAG GCTTTACGTGATATCGGCGCAACGAAGATCAATCTAGTGGTGATGAAGAC TTGGAGATATTTCCCTCGGTATAACATCAAAGATTTATCAAGGGGCATCT TATGGAGAATCTTGGAGATGCAAGGAAAATACAATATGTGGTATATCGGA TCCTCTGTGTCTTTCGAAAGTGTCAAATCAGTCGTGGAGTATAATAAATT ATTGGTACATAACTTTGAATTGCCAACAGAGTCGCAAAATATGAGCCCAC CAAGCTAAAATGCTGTTCTAGTGTTCATTTAATTTACTTAATTTAAAAAA ATGTGGAATAACTTTAAATTGTATTCACTTGTATTTAATATGGGAATTTT TTTGTttttttttttgtttgtatttattgcttaatattattaaaattaat tttgaaattgtagAAATTGTTCAAATATTGATACATTTAGtcggaaaaaa taaaaatcattttaatctCTGAGctaaaaattttgtattcaaatTCGTAT AGGTGATAACACAAGTCTAATGATAAGTAAGGCCTATAAACCAGGAAATG GTGCCTTAAAAGATCGAAACATTTATAAAGCTTATactaaacatttgaaa aattgactagAATTTTGAACAAATAGTGCTGTG

Coding sequence (CDS) from alignment at scaffold_9:296510..308042+

>TCONS_00073311 ID=TCONS_00073311|Name=TCONS_00073311|organism=Clytia hemisphaerica|type=CDS|length=4491bp|location=Sequence derived from alignment at scaffold_9:296510..308042+ (Clytia hemisphaerica)
ATGGGAAAGAGCCTGCAGACTANCACTGTCTATTTACAGCCTGATTATGA
AGATAATATAATCTCCTTAGTGAATGAATATGCACCCGGCGATTTAGTTC
ATTTCCCACCTGCATCAATATGGCTTGATGGGAAAGAGCCTGCAGACtat
aaaagctatatttttcGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTATGCACCCGGCGATTTAGTTCATTTCCCACCT
GCATCAATATGGCTTGATGGGAAAGAGCCTGCAGACtataaaagctatat
ttttcGTTACGCCATCCAGCACCTGAAGACTACAAATATAACTGTCATTA
AGAAAGGTTTTTTTGATGCCATCTCAGGCTATATAAGAATTCATCGTGAA
CTGTTTGGTGTCTATGATGGTGAACATCTGCCAGAGCTGGTCGAACCAAA
GGACAAAGAGAGAGTTGAtaaaacttttgaagaatttcttgacgatgaaa
atcttcaattaTTGAAACCACTCTTGTACGCTAGTAATTCCGTGCAAGGT
TATGGACGACTTGAGGAGATTCCAACAATGTACGGAATGACATGGAACAC
ACCAAAAATGATGGGTGTCCTTTTGAAAAGACTATCTGGTGACAATATTG
GAGGATTCTACATGCTGAGAAACGGTTTCCAAAACCTCTGGAAAAACATT
ATCGAGAAAGAGGGCCTTAACATCAAATACAACGTAAATATAATCAAAAT
TCGACGAAGTGAGAATGACATCTTTATTAAAAACAAGGTTGGGAAAAAAG
GACCCCGAACATGGGATCGCTATGATTTTATAATTTGGAGTCCGGAAATG
AAAACAAGTCTCCGGTACTGGGATTGCCGTAAAGATGAAGCGTACTACTT
CTCTCGTACAAGACCAACTTGGTTTACAACAGCTTTAGTTGACACACTCG
GTGCAAAAAAAGGACCATCTCCTATTGATTATTGGGTAGATAATATCAAC
AAAAGACGTCAAGGTGCGATATGGGGACAACGTGATTCATATGCTGCTAT
TCGGAATTACACAGGCCCCGATTATCAATCGGGGAAATTTAAATCGGGTA
ATGATGATTCCCCGATTCGCACTACGGTCACATATCAAATGAATGATCGC
CGACCCTCACGATTCCGATTGCGACGTAAATTGTTGAAGGCTTTACGTGA
TATCGGCGCAACGAAGATCAATCTAGTGGTGATGAAGACTTGGAGATATT
TCCCTCGGTATAACATCAAAGATTTATCAAGGGGCATCTTATGGAGAATC
TTGGAGATGCAAGGAAAATACAATATGTGGTATATCGGATCCTCTGTGTC
TTTCGAAAGTGTCAAATCAGTCGTGGAGTATAATAAATTATTGGTACATA
ACTTTGAATTGCCAACAGAGTCGCAAAATATGAGCCCACCAAGCTAAATG
GGAAAGAGCCTGCAGACTANCACTGTCTATTTACAGCCTGATTATGAAGA
TAATATAATCTCCTTAGTGAATGAATATGCACCCGGCGATTTAGTTCATT
TCCCACCTGCATCAATATGGCTTGATGGGAAAGAGCCTGCAGACtataaa
agctatatttttcGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTATGCACCCGGCGATTTAGTTCATTTCCCACCTGCA
TCAATATGGCTTGATGGGAAAGAGCCTGCAGACtataaaagctatatttt
tcGTTACGCCATCCAGCACCTGAAGACTACAAATATAACTGTCATTAAGA
AAGGTTTTTTTGATGCCATCTCAGGCTATATAAGAATTCATCGTGAACTG
TTTGGTGTCTATGATGGTGAACATCTGCCAGAGCTGGTCGAACCAAAGGA
CAAAGAGAGAGTTGAtaaaacttttgaagaatttcttgacgatgaaaatc
ttcaattaTTGAAACCACTCTTGTACGCTAGTAATTCCGTGCAAGGTTAT
GGACGACTTGAGGAGATTCCAACAATGTACGGAATGACATGGAACACACC
AAAAATGATGGGTGTCCTTTTGAAAAGACTATCTGGTGACAATATTGGAG
GATTCTACATGCTGAGAAACGGTTTCCAAAACCTCTGGAAAAACATTATC
GAGAAAGAGGGCCTTAACATCAAATACAACGTAAATATAATCAAAATTCG
ACGAAGTGAGAATGACATCTTTATTAAAAACAAGGTTGGGAAAAAAGGAC
CCCGAACATGGGATCGCTATGATTTTATAATTTGGAGTCCGGAAATGAAA
ACAAGTCTCCGGTACTGGGATTGCCGTAAAGATGAAGCGTACTACTTCTC
TCGTACAAGACCAACTTGGTTTACAACAGCTTTAGTTGACACACTCGGTG
CAAAAAAAGGACCATCTCCTATTGATTATTGGGTAGATAATATCAACAAA
AGACGTCAAGGTGCGATATGGGGACAACGTGATTCATATGCTGCTATTCG
GAATTACACAGGCCCCGATTATCAATCGGGGAAATTTAAATCGGGTAATG
ATGATTCCCCGATTCGCACTACGGTCACATATCAAATGAATGATCGCCGA
CCCTCACGATTCCGATTGCGACGTAAATTGTTGAAGGCTTTACGTGATAT
CGGCGCAACGAAGATCAATCTAGTGGTGATGAAGACTTGGAGATATTTCC
CTCGGTATAACATCAAAGATTTATCAAGGGGCATCTTATGGAGAATCTTG
GAGATGCAAGGAAAATACAATATGTGGTATATCGGATCCTCTGTGTCTTT
CGAAAGTGTCAAATCAGTCGTGGAGTATAATAAATTATTGGTACATAACT
TTGAATTGCCAACAGAGTCGCAAAATATGAGCCCACCAAGCTAAATGGGA
AAGAGCCTGCAGACTANCACTGTCTATTTACAGCCTGATTATGAAGATAA
TATAATCTCCTTAGTGAATGAATATGCACCCGGCGATTTAGTTCATTTCC
CACCTGCATCAATATGGCTTGATGGGAAAGAGCCTGCAGACtataaaagc
tatatttttcGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTATGCACCCGGCGATTTAGTTCATTTCCCACCTGCATCA
ATATGGCTTGATGGGAAAGAGCCTGCAGACtataaaagctatatttttcG
TTACGCCATCCAGCACCTGAAGACTACAAATATAACTGTCATTAAGAAAG
GTTTTTTTGATGCCATCTCAGGCTATATAAGAATTCATCGTGAACTGTTT
GGTGTCTATGATGGTGAACATCTGCCAGAGCTGGTCGAACCAAAGGACAA
AGAGAGAGTTGAtaaaacttttgaagaatttcttgacgatgaaaatcttc
aattaTTGAAACCACTCTTGTACGCTAGTAATTCCGTGCAAGGTTATGGA
CGACTTGAGGAGATTCCAACAATGTACGGAATGACATGGAACACACCAAA
AATGATGGGTGTCCTTTTGAAAAGACTATCTGGTGACAATATTGGAGGAT
TCTACATGCTGAGAAACGGTTTCCAAAACCTCTGGAAAAACATTATCGAG
AAAGAGGGCCTTAACATCAAATACAACGTAAATATAATCAAAATTCGACG
AAGTGAGAATGACATCTTTATTAAAAACAAGGTTGGGAAAAAAGGACCCC
GAACATGGGATCGCTATGATTTTATAATTTGGAGTCCGGAAATGAAAACA
AGTCTCCGGTACTGGGATTGCCGTAAAGATGAAGCGTACTACTTCTCTCG
TACAAGACCAACTTGGTTTACAACAGCTTTAGTTGACACACTCGGTGCAA
AAAAAGGACCATCTCCTATTGATTATTGGGTAGATAATATCAACAAAAGA
CGTCAAGGTGCGATATGGGGACAACGTGATTCATATGCTGCTATTCGGAA
TTACACAGGCCCCGATTATCAATCGGGGAAATTTAAATCGGGTAATGATG
ATTCCCCGATTCGCACTACGGTCACATATCAAATGAATGATCGCCGACCC
TCACGATTCCGATTGCGACGTAAATTGTTGAAGGCTTTACGTGATATCGG
CGCAACGAAGATCAATCTAGTGGTGATGAAGACTTGGAGATATTTCCCTC
GGTATAACATCAAAGATTTATCAAGGGGCATCTTATGGAGAATCTTGGAG
ATGCAAGGAAAATACAATATGTGGTATATCGGATCCTCTGTGTCTTTCGA
AAGTGTCAAATCAGTCGTGGAGTATAATAAATTATTGGTACATAACTTTG
AATTGCCAACAGAGTCGCAAAATATGAGCCCACCAAGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045480XLOC_045480Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073311-proteinTCONS_00073311-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073311-exon-scaffold_9-1491911889:296510..296546TCONS_00073311-exon-scaffold_9-1491911889:296510..296546Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1510915933:296510..296546TCONS_00073311-exon-scaffold_9-1510915933:296510..296546Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1575043694:296510..296546TCONS_00073311-exon-scaffold_9-1575043694:296510..296546Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1491911889:303752..304640TCONS_00073311-exon-scaffold_9-1491911889:303752..304640Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1510915933:303752..304640TCONS_00073311-exon-scaffold_9-1510915933:303752..304640Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1575043694:303752..304640TCONS_00073311-exon-scaffold_9-1575043694:303752..304640Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1491911889:304891..305092TCONS_00073311-exon-scaffold_9-1491911889:304891..305092Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1510915933:304891..305092TCONS_00073311-exon-scaffold_9-1510915933:304891..305092Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1575043694:304891..305092TCONS_00073311-exon-scaffold_9-1575043694:304891..305092Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1491911889:306874..308042TCONS_00073311-exon-scaffold_9-1491911889:306874..308042Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1510915933:306874..308042TCONS_00073311-exon-scaffold_9-1510915933:306874..308042Clytia hemisphaericaexon
TCONS_00073311-exon-scaffold_9-1575043694:306874..308042TCONS_00073311-exon-scaffold_9-1575043694:306874..308042Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:296510..308042 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0849563 0.165692 0.0846098 0.075287 0.589803 0.470774 6.57919 8.22301 26.4703 51.6467 36.8502 18.9736 5.70304 5.80432 2.11069 2.73048 1.93555 1.2802 13.2562 29.576 8.33696 9.04121 9.72968 30.7402 31.8436 54.3607 4.44179 2.83457 361.803 194.428
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073311 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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