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TCONS_00073287 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073287
Unique NameTCONS_00073287
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1033

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073287 ID=TCONS_00073287|Name=TCONS_00073287|organism=Clytia hemisphaerica|type=transcript|length=1033bp
CTAgatgattttaacaaaaatgaagAGCTATGGCAAAACTATTTCAGgaT
GGCGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACCAAAAAATGGG
ACGGCAAACGTATGGAAAGTGTGAGCTTGAATGATGGAACTATGCTCAGT
TTTGATGatgttTGGGAAATTTTGCGCGGAAAGAAATTCGGgaaattcga
agaaattttCCAACAAAATCCGAACATCGTCAACTCATTGCGTTCTGGTC
TTGGTACGACACTTCTCATGAGGGCTGTTTGGAGAAATCGTTTCGACGTT
TTCGTTCACTTGATGAATTATCCTCAAGATCTTTCACTCGTGAGCAATGA
AGGTTGGAACGTTCTTCATCATGTTGGTTTGTTTGGAACAGTTCGTCATT
TGGAAAAGTTTGATCAACAAACAATCGAAAAGTTGATCAATGGAAGAAGC
AAACTGAACATCACACCATTGCATCTTGCAGCACGTTGGAACAATCATGA
CGTCAACAGATGGTTGTTGGCCAAAGGAGCGGATCATGaactgaaaaaca
aaaatggtcaaCGCCCTGATGAACATCCTGATTGTGATGGTGTTACCAAA
GAAATCTTTCGATCGTTTCGTTCGTCTtgattgaTTGATTGTTTCCATTG
TTTGTTTCATCGtttccaatgacgtcatcggttccAAACTATTTCCACat
tctcAGAATGACAGCACGCATGAGAAGTTACACCCGTCGTTTTTGACGCC
GTTCCTACGATTACGTTATTTATTCATTCCGTCTCTAGTACAGTTCTGTT
TGTGTTCAAACATTACTACCTtcattttggcttgtttttagaTGTATTTT
CACCACTTCACTAACTTGACTATTATTATGTCAATCGTCACTAGTTTTGC
TGGCGTGTCTACTCTTACGCCCTTACGTTTCCGCCTTTACGAATTACCTT
GGTTGAATTTTAATATGAAAAAGAGTACAGTGCTAAAACTCATGTCACTA
TTGGTTTCGATTGGATCAtttcccccggggggg
Run BLAST on NCBI

protein sequence of TCONS_00073287-protein

>TCONS_00073287-protein ID=TCONS_00073287-protein|Name=TCONS_00073287-protein|organism=Clytia hemisphaerica|type=polypeptide|length=209bp
LDDFNKNEELWQNYFRMAFTLSTSISSLGTKKWDGKRMESVSLNDGTMLS
FDDVWEILRGKKFGKFEEIFQQNPNIVNSLRSGLGTTLLMRAVWRNRFDV
FVHLMNYPQDLSLVSNEGWNVLHHVGLFGTVRHLEKFDQQTIEKLINGRS
KLNITPLHLAARWNNHDVNRWLLAKGADHELKNKNGQRPDEHPDCDGVTK
EIFRSFRSS
Run BLAST on NCBI

transcript from alignment at scaffold_9:1..6274+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073287 ID=TCONS_00073287|Name=TCONS_00073287|organism=Clytia hemisphaerica|type=transcript|length=6274bp|location=Sequence derived from alignment at scaffold_9:1..6274+ (Clytia hemisphaerica)
CTAgatgattttaacaaaaatgaagAGCTATGGCAAAACTATTTCAGGTA TAATCTTTctgttgaaattttcaagtattAATGATCTTTATCATTGCAAA AAGCTCAATGAGAGGATATAAgtcatattttccaaaattagaTGCCCGCT aaccctttaaccaaataaattccagacaaaaaagaaatacatattttttt tccttcaggaTGGCGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAAC GTAAGTCAATACAGTTGATGTCCTCTGATTCAGCATTGTCAATCAACNAA CTTCCATTTCATCTTTGGGAACGTAAGTCAATACAGTTGATGTCCTCTGA TTCAGCATTGTCAATCAACTAAACAGTCACTTGACAAATTCCCTTTAAAT TTCTCATAAAAGACGGACATTCTATCGCTATCATCTCCATGGGGTTGGGG TAATTAAAATTCACGATTaaacgatttacgattcacgattTGCGATGCAC GATTTCCGATCCATGTTCCATGCATAAATTATGCTGAATTATGCCTAATC ATGCTAATCATaacaaaatgatttgaaaacgGTGTTTagttcgggggggg gggggggaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNagaaaaaaaattaccctcGTTCGCAATGGAATGTAATAT TCCAATCttcataatttttgtttttgctgttCTGAAAGGTAAAGCTTCTA TGGATGATATATATTGATAATTACTCCTGCATATAGCAAAAAATGGGACG GCAAACGTATGGAAAGTGTGAGCTTGAATGATGGAACTATGCTCAGTTTT GATGGTAAGTTTGATtcgaaattttgttttcatattatatatggaaaatt ttataaattttcaactATACAACTATACAATCAAAAGCTCGCAAGTACCC AAAACGAAATATCCTAATTTTCTATTCTGGTGTTCTATATTTTCTTGATA AAAGCCTTTGAACATATAATCATATAatcccctgtgtcacagacccggtg gaccctcaccccggtggaaaaataggccaaaaaatcgtccccggtggaaa aaatatcctacaatttcaaccccactgcgaaattgctctatgattttatc cccattgaaaactgaatgtaaaacattgcacttcaaaaccatccccactg gaattttcgagctggaaaaaatagattttctatcaccattggcattttga tagaaattttcatccccactgagggaaaaagttctaccggggcactatga gacaggggtgttataataATTGTAGGCCAATCTGTATCATAGGATTTGTA CATCTgttaaataatattttctatCCAGTTTAAAGGGAAAAAATGCACAA TAAATGTatctgaaaatttgatttgagttgatttttttttcatcattcat TTGATTCAATGTTCAAATCATATCAAATCATCTCATTTCATTGACAGTAG TGAACAAACAGACGATTAGACACTGCCAGACAACAAAGGGCTAGCCATAC GAGATTTAGTGTTGCGGGTGTGTAGTGGaacgagttttgaaaaattttag gaAAACCGAAATACAGTAAAATCTCTTTAGTTCGAGCCcctactattcga atctttctataattcgaactgaaATATTGGTCCGCTCAGTTGGAAAGTTA ATTAAAGTACCGTCCGCaattatcaaatatttttttaatttgaagaaaat cctTGGTCCCTCGAAGGTACGAGTCCTTATTTTACCCGAAATGCTCACTT TTTTATTATTAATAGctaaattttgtcaaaatttcaagtcaatagcattt tccAATCACTAGATACGGTAACCTATGATTGATTTAGTTAAAAGgggggg ttttcaggggtcttaaataccgtcataccgacaaaattttgggtcaaata ccgtaataccgtcggcgaaggaagcctaataccgataccNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaataccgtaatcccgtc gtttttttctcgtaataccgatttaccgggggtaaaaaggctcaataccg tcataccgtaaaagtgaaaaccccccccTTAAAAGGGCAAATTCGagcgg atctgtaaaataaacgATACCAGCAGGTTTCGAAGTTGTCccacaaaatt tgagcaaaaaagaATTAGAGAGGGTCCTATTTTCGGTATTCTCAGAGACT GATGACGTCACCCAAACCCCTtttaccaaagattctcaaggTTTAACGTT TAAGAAAtaatttgagaatattttaagacttgATGGCCTCACTTGAAAGG GTTTTTCTCTTATTACGAAATGGGAGGGATACAAAGACAATCAACTGAAA TTATaataaaagagataaaaaaatgtcaatttcatcCTCAAGGGAacgat ttattttttttcttctcctgCTATAAAATGAAAGTTTCGTGCGtttgttt cattttctttttttatgtgATGGTGGTGATGGGGTGACTGGTTTTTGTGG AAaagtgaatgaatgaatgaacgaatGTAATCGGAgaaatttgtagattt tttacCTTTCATTTTCTGAACCTCTGCCCTAGTGCtgtatattttagtga aagtacGGGTGCAAAATTACATTTATTCAAGCtaggatttttttaaaaat aaaactagtTCAGCTTTATATGACGTTTTGAGAAACACATTACATATTAG CACttctattttttcatcttttacaCAAACACAATTTCGTGATTCTTTTT CAGAATAAGGCATAGTTTTCTCGGATTGCATCTCAAATAGTTCATGTGTA CTTTTCTGCTTTATCTTTGCTGTTTGTGTATTAGTTCACGcataaaattt cacttttgacaaaaattctattttgaaaacttttttcactttttcacatt cTGAGAAAtttttcgtggaatttttttttcagaatgcgATCGAGTTTCGT TTTTcgcattgaaaaaattaatttctttctgaacaaaaactttttatcaa aaccaaaaaaaaattagtcgATCAATCTGGAAATAAATTTCCGATtccgt tttcaattttttaactttgaatctttttttagttcttgagatctagatgt tcatttttttctaacttcaatttttttaccgtcacaaataaaaatgattt ctcactgagcaaaaagttttcattcaaaattcaaaatttcttcaCCATCA Gttcggaaatatttttctcattctgtttacaaaatttcagcttcaaagta ttTTTGGTTCCTGAGATATCGAGATccattttttgttgaatttttatttt ttactccGTGAAAGgtttgaatttcttctttttttcttcagatgttTGGG AAATTTTGCGCGGAAAGAAATTCGGgaaattcgaagaaattttCCAACAA AATCCGAACATCGTCAACTCATTGCGTTCTGGTCTTGGTACGACACTTCT CATGAGGGCTGTTTGGAGAAATCGTTTCGACGTTTTCGTTCACTTGATGA ATTATCCTCAAGATCTTTCACTCGTGAGCAATGAAGGTTGGAACGTTCTT CATCATGTTGGTTTGTTTGGAACAGTTCGTCATTTGGAAAAGTTTGATCA ACAAACAATCGAAAAGTTGATCAATGGAAGAAGCAAACTGAACATCACAC CATTGCATCTTGCAGCACGTTGGAACAATCATGACGTCAACAGATGGTTG TTGGCCAAAGGAGCGGATCATGaactgaaaaacaaaaatggtcaaCGCCC TGATGAACATCCTGATTGTGATGGTGTTACCAAAGAAATCTTTCGATCGT TTCGTTCGTCTtggtaagaaaaatatcaactttttcatgatttttttagg gtggaaatattttttggagtttgaaagaatttttttttctattattgcGA GAAGTGTTGAAACTTTAAATAGAGGTGAAAAGTTATTTAGAAAGTCTTTA TTTAAACTTTTTCAATCGGATAAATTTTGTCTTTTCGGAGTTCGAATGAA TGAAACAGATGAattgatttcaatattttgattgaGAGATTTTTCATTGT ATTGGACATATTTTGGAGATGGTTGAAATTTGCAAATAGATAGTAGTTTG TGCTGGTTTGTGAAATGTTTTCTCGGGTggttatgaatttatttttacgG TGAAGAAAGAAACTGtcgtttattttattttatgatattgttcatgtttc aaatgtttttcattcgattatttatttttcagattgaTTGATTGTTTCCA TTGTTTGTTTCATCGtttccaatgacgtcatcggttccAAACTATTTCCA CGTAAGTATATTTAATCATGTACTTGGTTTCCGGCTGATGTGAAATTGCC TAAAGCCTAAATTTTTCGGCATActggaattttttaaacaaatgaaTCCA TTCAAAAAACTTAGAAAGGAGGGCTTggttagcctgtaccaaactcttct tggTGGAATGAAAAGACCAAGGGAAATTCAGTATGATGTACAGTTCAGAT TTTCATGTGACTGAGACGAATACACGCAAGTCTCGGTTGTAAAGTGTTGA ACTATTTTCAGAATTAAGTTTCTTCAATTAGTCGAATTAATGCAATTTTT TTGTACTCGGTGTTTTTTAAACTCTTCCTCCAGACCAGATCAACATTCTC ATTAGCCACTTCTTTAAAAAACCATTTATTCATCTTCGAGTTAACAAGTT TTGTTGTGCAATTAACCTCCaatcgatttttatttttagattctcAGAAT GACAGCACGCATGAGAAGTTACACCCGTCGTTTTTGACGCCGTTCCTACG ATTACGTTATTTATTCATTCCGTCTCTAGTACAGTTCTGTTTGTGTTCAA ACATTACTACCTtcattttggcttgtttttagaTGTATTTTCACCACTTC ACTAACTTGACTATTATTATGTCAATCGTCACTAGTTTTGCTGGCGTGTC TACTCTTACGCCCTTACGTTTCCGCCTTTACGAATTACCTTGGTTGAATT TTAATATGAAAAAGAGTACAGTGCTAAAACTCATGTCACTATTGGTTTCG ATTGGATCAtttcccccggggggg

Coding sequence (CDS) from alignment at scaffold_9:1..6274+

>TCONS_00073287 ID=TCONS_00073287|Name=TCONS_00073287|organism=Clytia hemisphaerica|type=CDS|length=3150bp|location=Sequence derived from alignment at scaffold_9:1..6274+ (Clytia hemisphaerica)
CTAgatgattttaacaaaaatgaagAGCTATGGCAAAACTATTTCAGgaT
GGCGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACCAAAAAATGGG
ACGGCAAACGTATGGAAAGTGTGAGCTTGAATGATGGAACTATGCTCAGT
TTTGATGatgttTGGGAAATTTTGCGCGGAAAGAAATTCGGgaaattcga
agaaattttCCAACAAAATCCGAACATCGTCAACTCATTGCGTTCTGGTC
TTGGTACGACACTTCTCATGAGGGCTGTTTGGAGAAATCGTTTCGACGTT
TTCGTTCACTTGATGAATTATCCTCAAGATCTTTCACTCGTGAGCAATGA
AGGTTGGAACGTTCTTCATCATGTTGGTTTGTTTGGAACAGTTCGTCATT
TGGAAAAGTTTGATCAACAAACAATCGAAAAGTTGATCAATGGAAGAAGC
AAACTGAACATCACACCATTGCATCTTGCAGCACGTTGGAACAATCATGA
CGTCAACAGATGGTTGTTGGCCAAAGGAGCGGATCATGaactgaaaaaca
aaaatggtcaaCGCCCTGATGAACATCCTGATTGTGATGGTGTTACCAAA
GAAATCTTTCGATCGTTTCGTTCGTCTtgaCTAgatgattttaacaaaaa
tgaagAGCTATGGCAAAACTATTTCAGgaTGGCGTTTACTCTTTCAACTT
CCATTTCATCTTTGGGAACCAAAAAATGGGACGGCAAACGTATGGAAAGT
GTGAGCTTGAATGATGGAACTATGCTCAGTTTTGATGatgttTGGGAAAT
TTTGCGCGGAAAGAAATTCGGgaaattcgaagaaattttCCAACAAAATC
CGAACATCGTCAACTCATTGCGTTCTGGTCTTGGTACGACACTTCTCATG
AGGGCTGTTTGGAGAAATCGTTTCGACGTTTTCGTTCACTTGATGAATTA
TCCTCAAGATCTTTCACTCGTGAGCAATGAAGGTTGGAACGTTCTTCATC
ATGTTGGTTTGTTTGGAACAGTTCGTCATTTGGAAAAGTTTGATCAACAA
ACAATCGAAAAGTTGATCAATGGAAGAAGCAAACTGAACATCACACCATT
GCATCTTGCAGCACGTTGGAACAATCATGACGTCAACAGATGGTTGTTGG
CCAAAGGAGCGGATCATGaactgaaaaacaaaaatggtcaaCGCCCTGAT
GAACATCCTGATTGTGATGGTGTTACCAAAGAAATCTTTCGATCGTTTCG
TTCGTCTtgaCTAgatgattttaacaaaaatgaagAGCTATGGCAAAACT
ATTTCAGgaTGGCGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACC
AAAAAATGGGACGGCAAACGTATGGAAAGTGTGAGCTTGAATGATGGAAC
TATGCTCAGTTTTGATGatgttTGGGAAATTTTGCGCGGAAAGAAATTCG
GgaaattcgaagaaattttCCAACAAAATCCGAACATCGTCAACTCATTG
CGTTCTGGTCTTGGTACGACACTTCTCATGAGGGCTGTTTGGAGAAATCG
TTTCGACGTTTTCGTTCACTTGATGAATTATCCTCAAGATCTTTCACTCG
TGAGCAATGAAGGTTGGAACGTTCTTCATCATGTTGGTTTGTTTGGAACA
GTTCGTCATTTGGAAAAGTTTGATCAACAAACAATCGAAAAGTTGATCAA
TGGAAGAAGCAAACTGAACATCACACCATTGCATCTTGCAGCACGTTGGA
ACAATCATGACGTCAACAGATGGTTGTTGGCCAAAGGAGCGGATCATGaa
ctgaaaaacaaaaatggtcaaCGCCCTGATGAACATCCTGATTGTGATGG
TGTTACCAAAGAAATCTTTCGATCGTTTCGTTCGTCTtgaCTAgatgatt
ttaacaaaaatgaagAGCTATGGCAAAACTATTTCAGgaTGGCGTTTACT
CTTTCAACTTCCATTTCATCTTTGGGAACCAAAAAATGGGACGGCAAACG
TATGGAAAGTGTGAGCTTGAATGATGGAACTATGCTCAGTTTTGATGatg
ttTGGGAAATTTTGCGCGGAAAGAAATTCGGgaaattcgaagaaattttC
CAACAAAATCCGAACATCGTCAACTCATTGCGTTCTGGTCTTGGTACGAC
ACTTCTCATGAGGGCTGTTTGGAGAAATCGTTTCGACGTTTTCGTTCACT
TGATGAATTATCCTCAAGATCTTTCACTCGTGAGCAATGAAGGTTGGAAC
GTTCTTCATCATGTTGGTTTGTTTGGAACAGTTCGTCATTTGGAAAAGTT
TGATCAACAAACAATCGAAAAGTTGATCAATGGAAGAAGCAAACTGAACA
TCACACCATTGCATCTTGCAGCACGTTGGAACAATCATGACGTCAACAGA
TGGTTGTTGGCCAAAGGAGCGGATCATGaactgaaaaacaaaaatggtca
aCGCCCTGATGAACATCCTGATTGTGATGGTGTTACCAAAGAAATCTTTC
GATCGTTTCGTTCGTCTtgaCTAgatgattttaacaaaaatgaagAGCTA
TGGCAAAACTATTTCAGgaTGGCGTTTACTCTTTCAACTTCCATTTCATC
TTTGGGAACCAAAAAATGGGACGGCAAACGTATGGAAAGTGTGAGCTTGA
ATGATGGAACTATGCTCAGTTTTGATGatgttTGGGAAATTTTGCGCGGA
AAGAAATTCGGgaaattcgaagaaattttCCAACAAAATCCGAACATCGT
CAACTCATTGCGTTCTGGTCTTGGTACGACACTTCTCATGAGGGCTGTTT
GGAGAAATCGTTTCGACGTTTTCGTTCACTTGATGAATTATCCTCAAGAT
CTTTCACTCGTGAGCAATGAAGGTTGGAACGTTCTTCATCATGTTGGTTT
GTTTGGAACAGTTCGTCATTTGGAAAAGTTTGATCAACAAACAATCGAAA
AGTTGATCAATGGAAGAAGCAAACTGAACATCACACCATTGCATCTTGCA
GCACGTTGGAACAATCATGACGTCAACAGATGGTTGTTGGCCAAAGGAGC
GGATCATGaactgaaaaacaaaaatggtcaaCGCCCTGATGAACATCCTG
ATTGTGATGGTGTTACCAAAGAAATCTTTCGATCGTTTCGTTCGTCTtga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045470XLOC_045470Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073287-proteinTCONS_00073287-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073287-exon-scaffold_9-1491911889:1..47TCONS_00073287-exon-scaffold_9-1491911889:1..47Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1510915933:1..47TCONS_00073287-exon-scaffold_9-1510915933:1..47Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1575043694:1..47TCONS_00073287-exon-scaffold_9-1575043694:1..47Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1491911889:209..250TCONS_00073287-exon-scaffold_9-1491911889:209..250Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1510915933:209..250TCONS_00073287-exon-scaffold_9-1510915933:209..250Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1575043694:209..250TCONS_00073287-exon-scaffold_9-1575043694:209..250Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1491911889:937..1004TCONS_00073287-exon-scaffold_9-1491911889:937..1004Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1510915933:937..1004TCONS_00073287-exon-scaffold_9-1510915933:937..1004Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1575043694:937..1004TCONS_00073287-exon-scaffold_9-1575043694:937..1004Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1491911889:4542..5013TCONS_00073287-exon-scaffold_9-1491911889:4542..5013Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1510915933:4542..5013TCONS_00073287-exon-scaffold_9-1510915933:4542..5013Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1575043694:4542..5013TCONS_00073287-exon-scaffold_9-1575043694:4542..5013Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1491911889:5433..5501TCONS_00073287-exon-scaffold_9-1491911889:5433..5501Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1510915933:5433..5501TCONS_00073287-exon-scaffold_9-1510915933:5433..5501Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1575043694:5433..5501TCONS_00073287-exon-scaffold_9-1575043694:5433..5501Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1491911889:5940..6274TCONS_00073287-exon-scaffold_9-1491911889:5940..6274Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1510915933:5940..6274TCONS_00073287-exon-scaffold_9-1510915933:5940..6274Clytia hemisphaericaexon
TCONS_00073287-exon-scaffold_9-1575043694:5940..6274TCONS_00073287-exon-scaffold_9-1575043694:5940..6274Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:1..6274 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.0817312 0 0.0978511 0.090875 0.718225 0.645799 0.571551 1.02017 1.88992 1.83164 1.62732 1.43434 1.38107 0.795352 3.02009 2.70767 0.6385 0.434466 0.60202 0.527784 0.746896 1.05221 3.0307 1.9019 3.65151 2.29472
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073287 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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