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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073285 ID=TCONS_00073285|Name=TCONS_00073285|organism=Clytia hemisphaerica|type=transcript|length=1260bp
AGAACTTTGATGagcaaacaaaaaattgatgatgaatTTAAAagcgattt
ttttctggattaTTTCGTTGCAATTGGTTAGAACAGAAGAAATTTTTGGT
AACATGAAACAAGATTTTTTCGCATGTGATAGAGTAAAGAATGTTACGAT
TGTTccttttatgaagcaaaatattcGCTCAACAATCTTCAGCTTTAGAG
TGCCACAACTGACGTATCTTATAAAATCCTTGTTAGATACTCCTTGTACT
ACAGTTTGGGTTTACTCCCCATTGGAAAATAGATCTATTGCACAGAACAA
AGAcaattcaaacatttttttagaGACAAAGATTCAAGCAATGGATCTAC
CTGATACAAACGTACTTATCGATTTTCTAAATGAGGTTAAAAAATTAGCT
GTTGAAGAAAACCAACACACATTATTGTTTATTGCTCTTAACTTTCAGTA
TGACTTATCTGAGCAAGAAATATCACTAATTGTAGATTGTTTGAAGGAGT
CGATGGAATATATGAGCGTGGTAATGCAGTGCTCGAATGAAAACGACATA
TGTAGTCAATCAGAAAAGTTCATACCTCTACCAAAAATAATATATGATGT
TAGATCAAAAGTTTTCAATCCACACGTGCACAAAGTCTTACTTGATGGGA
TAATCGATAAAGATTATGACCGATTCAAAGAATATGATGATCTTGATTGC
CGAAATAAATCCCGACGACTTCATCTATTGTTTACTCCAATGCTAGGTCG
GATGGGTTCCGAACCAAACATGGttaaatttttccaatttaaaTTCAAAG
TACGTGTTGATTTCTTCTGGCAATTACAATTGTTCCTTTTTTTCGGTACT
GATGATGGCTTGATGGCTGATGATGGCTTTATTGATTTAAACGAAGCGAA
AGCAATTCTTATGAAAGCTAATGGTGATGACATCATAAACATAATTATAA
AACTTAAAGGGGAAAGTTTTCCCATTCCAGAAGAGCTGAAACCTTTAAGT
AAATGGGTGATAGTGATCGTCGACAATTCAATCCATGATTCGCCGAGAAT
CGAAAAAGACGGAACAATAACTATATGGGAGGAAGATATAGCAAGTCCCT
TATTGTTTCATATGTTGATTAAGAAATTCAAAGAGTTGATTTGTTAAGTC
ATTTATCATCActcaaaatcttataaaaattattttttataaaagtaaaT
CATTTTTTGTGACGAAGCCACGTAAATATCTCTAAGGTTACTCAAATGGA
GATAATTTAG Run BLAST on NCBI protein sequence of TCONS_00073285-protein >TCONS_00073285-protein ID=TCONS_00073285-protein|Name=TCONS_00073285-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp
MMNLKAIFFWIISLQLVRTEEIFGNMKQDFFACDRVKNVTIVPFMKQNIR
STIFSFRVPQLTYLIKSLLDTPCTTVWVYSPLENRSIAQNKDNSNIFLET
KIQAMDLPDTNVLIDFLNEVKKLAVEENQHTLLFIALNFQYDLSEQEISL
IVDCLKESMEYMSVVMQCSNENDICSQSEKFIPLPKIIYDVRSKVFNPHV
HKVLLDGIIDKDYDRFKEYDDLDCRNKSRRLHLLFTPMLGRMGSEPNMVK
FFQFKFKVRVDFFWQLQLFLFFGTDDGLMADDGFIDLNEAKAILMKANGD
DIINIIIKLKGESFPIPEELKPLSKWVIVIVDNSIHDSPRIEKDGTITIW
EEDIASPLLFHMLIKKFKELIC Run BLAST on NCBI transcript from alignment at scaffold_89:274969..276228 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073285 ID=TCONS_00073285|Name=TCONS_00073285|organism=Clytia hemisphaerica|type=transcript|length=1260bp|location=Sequence derived from alignment at scaffold_89:274969..276228 (Clytia hemisphaerica)
CTAAATTATCTCCATTTGAGTAACCTTAGAGATATTTACGTGGCTTCGTC
ACAAAAAATGAtttacttttataaaaaataatttttataagattttgagT
GATGATAAATGACTTAACAAATCAACTCTTTGAATTTCTTAATCAACATA
TGAAACAATAAGGGACTTGCTATATCTTCCTCCCATATAGTTATTGTTCC
GTCTTTTTCGATTCTCGGCGAATCATGGATTGAATTGTCGACGATCACTA
TCACCCATTTACTTAAAGGTTTCAGCTCTTCTGGAATGGGAAAACTTTCC
CCTTTAAGTTTTATAATTATGTTTATGATGTCATCACCATTAGCTTTCAT
AAGAATTGCTTTCGCTTCGTTTAAATCAATAAAGCCATCATCAGCCATCA
AGCCATCATCAGTACCGAAAAAAAGGAACAATTGTAATTGCCAGAAGAAA
TCAACACGTACTTTGAAtttaaattggaaaaatttaaCCATGTTTGGTTC
GGAACCCATCCGACCTAGCATTGGAGTAAACAATAGATGAAGTCGTCGGG
ATTTATTTCGGCAATCAAGATCATCATATTCTTTGAATCGGTCATAATCT
TTATCGATTATCCCATCAAGTAAGACTTTGTGCACGTGTGGATTGAAAAC
TTTTGATCTAACATCATATATTATTTTTGGTAGAGGTATGAACTTTTCTG
ATTGACTACATATGTCGTTTTCATTCGAGCACTGCATTACCACGCTCATA
TATTCCATCGACTCCTTCAAACAATCTACAATTAGTGATATTTCTTGCTC
AGATAAGTCATACTGAAAGTTAAGAGCAATAAACAATAATGTGTGTTGGT
TTTCTTCAACAGCTAATTTTTTAACCTCATTTAGAAAATCGATAAGTACG
TTTGTATCAGGTAGATCCATTGCTTGAATCTTTGTCtctaaaaaaatgtt
tgaattgTCTTTGTTCTGTGCAATAGATCTATTTTCCAATGGGGAGTAAA
CCCAAACTGTAGTACAAGGAGTATCTAACAAGGATTTTATAAGATACGTC
AGTTGTGGCACTCTAAAGCTGAAGATTGTTGAGCgaatattttgcttcat
aaaaggAACAATCGTAACATTCTTTACTCTATCACATGCGAAAAAATCTT
GTTTCATGTTACCAAAAATTTCTTCTGTTCTAACCAATTGCAACGAAAta
atccagaaaaaaatcgctTTTAAattcatcatcaattttttgtttgctCA
TCAAAGTTCT Coding sequence (CDS) from alignment at scaffold_89:274969..276228 >TCONS_00073285 ID=TCONS_00073285|Name=TCONS_00073285|organism=Clytia hemisphaerica|type=CDS|length=1119bp|location=Sequence derived from alignment at scaffold_89:274969..276228 (Clytia hemisphaerica)
TTAACAAATCAACTCTTTGAATTTCTTAATCAACATATGAAACAATAAGG
GACTTGCTATATCTTCCTCCCATATAGTTATTGTTCCGTCTTTTTCGATT
CTCGGCGAATCATGGATTGAATTGTCGACGATCACTATCACCCATTTACT
TAAAGGTTTCAGCTCTTCTGGAATGGGAAAACTTTCCCCTTTAAGTTTTA
TAATTATGTTTATGATGTCATCACCATTAGCTTTCATAAGAATTGCTTTC
GCTTCGTTTAAATCAATAAAGCCATCATCAGCCATCAAGCCATCATCAGT
ACCGAAAAAAAGGAACAATTGTAATTGCCAGAAGAAATCAACACGTACTT
TGAAtttaaattggaaaaatttaaCCATGTTTGGTTCGGAACCCATCCGA
CCTAGCATTGGAGTAAACAATAGATGAAGTCGTCGGGATTTATTTCGGCA
ATCAAGATCATCATATTCTTTGAATCGGTCATAATCTTTATCGATTATCC
CATCAAGTAAGACTTTGTGCACGTGTGGATTGAAAACTTTTGATCTAACA
TCATATATTATTTTTGGTAGAGGTATGAACTTTTCTGATTGACTACATAT
GTCGTTTTCATTCGAGCACTGCATTACCACGCTCATATATTCCATCGACT
CCTTCAAACAATCTACAATTAGTGATATTTCTTGCTCAGATAAGTCATAC
TGAAAGTTAAGAGCAATAAACAATAATGTGTGTTGGTTTTCTTCAACAGC
TAATTTTTTAACCTCATTTAGAAAATCGATAAGTACGTTTGTATCAGGTA
GATCCATTGCTTGAATCTTTGTCtctaaaaaaatgtttgaattgTCTTTG
TTCTGTGCAATAGATCTATTTTCCAATGGGGAGTAAACCCAAACTGTAGT
ACAAGGAGTATCTAACAAGGATTTTATAAGATACGTCAGTTGTGGCACTC
TAAAGCTGAAGATTGTTGAGCgaatattttgcttcataaaaggAACAATC
GTAACATTCTTTACTCTATCACATGCGAAAAAATCTTGTTTCATGTTACC
AAAAATTTCTTCTGTTCTAACCAATTGCAACGAAAtaatccagaaaaaaa
tcgctTTTAAattcatcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073285-exon-scaffold_89-1491911889:274969..276228 | TCONS_00073285-exon-scaffold_89-1491911889:274969..276228 | Clytia hemisphaerica | exon |
| TCONS_00073285-exon-scaffold_89-1510915933:274969..276228 | TCONS_00073285-exon-scaffold_89-1510915933:274969..276228 | Clytia hemisphaerica | exon |
| TCONS_00073285-exon-scaffold_89-1575043694:274969..276228 | TCONS_00073285-exon-scaffold_89-1575043694:274969..276228 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_89 | supercontig | scaffold_89:274969..276228 . |
Blast
The following BLAST results are available for this feature:
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