|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073279 ID=TCONS_00073279|Name=TCONS_00073279|organism=Clytia hemisphaerica|type=transcript|length=1255bp
AAAAGCTTGAAGTTAGTACATAGCTTGTGGGTGTAACAAAAACTTGCTCA
GtagtgaaaaacaaaaattattataaagaaGAGCAACTATAAATCACTAT
CAAGAAACATGGCGAAAACAATTGTTCTTTTTACAATTGTTTTGATAATG
GTAGAATTAACTAATGCGCGACCAGCGAGTGAGTCTGCAAATTGTTATCA
TATATGCACCGGTGATGGAGATTGCACGAATCCAGATTGTCCTACATGCC
AGAATTTTCCTTACTTCGGCAAACGTTGTGCCATAGACTTTGGTGGTGAT
TTTGATAAACTTAAAGCTCTTGATAAACACAATGATGCCTTGAAGCTGTA
AAAAGGGCCGACAAGAACAGATGTAAATGGTACCTTTGGAATATTTCATA
ATTGGATGATATTATCGAAAATATATGATCAATTATTGGATGAATTGTGT
ATGAGATTCAACCCAGACTCGACTATTCTTCAGATTGAAATAGTATTTTA
ACAAATTCGCTGCCAACCACGAGTTTCTCGTAGGTAGAGGGGTCAAAGCA
ATACTTCAAAGAGCCATtactttcccagctggcacacaacgttgtttcaa
cgtttttttaacgttatatggacgttgtgaacgttagaaaaacgtcgaaa
caacgttgtgtgccagctggtttttttcacgacatttactttcgcaaatt
taaaggaaaaatatttttttgccagcataaactttcgcgaatcaagacgt
aaaattgcgaattttcacatgaaaaaatggcttagagagaCAAATAATTt
atggattggcttgaaacatttttcctttGACTTATTACATAGTCTTTTAA
CGGGCTAATAAGTGCCATATAAGCTACATTtgattcaaagtttgaagttt
tacagattttctattttgtcacgAAATTTTCGCGaccataaactttcgcg
aatggcccttcctagaatttttaaagacatttacttttgcgGAAAGGGCC
TAAATTCGTgaaaatcaaaagtttctacTCGTGGAAGTTTGTACGCCTGA
TGTTCTTTTAATAGAGAAACGTTTGCTTGCTTCTTTAATACATTTTTGCA
ATCTACATGAAATTCTGCTTCGATTGGTATACAATGTGAAGGAATTCGAA
ACAGAACTCAGGCAAAAGGAGCCTctgaaaataaaacttttgataaaatt
tcaagaggacaaaatttctgaaaaaggcTCGGAAGCGAGTGTGTATAAAG
ACGCA Run BLAST on NCBI transcript from alignment at scaffold_89:139470..140724 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073279 ID=TCONS_00073279|Name=TCONS_00073279|organism=Clytia hemisphaerica|type=transcript|length=1255bp|location=Sequence derived from alignment at scaffold_89:139470..140724 (Clytia hemisphaerica)
TGCGTCTTTATACACACTCGCTTCCGAgcctttttcagaaattttgtcct
cttgaaattttatcaaaagttttattttcagAGGCTCCTTTTGCCTGAGT
TCTGTTTCGAATTCCTTCACATTGTATACCAATCGAAGCAGAATTTCATG
TAGATTGCAAAAATGTATTAAAGAAGCAAGCAAACGTTTCTCTATTAAAA
GAACATCAGGCGTACAAACTTCCACGAgtagaaacttttgattttcACGA
ATTTAGGCCCTTTCcgcaaaagtaaatgtctttaaaaattctaggaaggg
ccattcgcgaaagtttatggtCGCGAAAATTTcgtgacaaaatagaaaat
ctgtaaaacttcaaactttgaatcaAATGTAGCTTATATGGCACTTATTA
GCCCGTTAAAAGACTATGTAATAAGTCaaaggaaaaatgtttcaagccaa
tccataAATTATTTGtctctctaagccattttttcatgtgaaaattcgca
attttacgtcttgattcgcgaaagtttatgctggcaaaaaaatatttttc
ctttaaatttgcgaaagtaaatgtcgtgaaaaaaaccagctggcacacaa
cgttgtttcgacgtttttctaacgttcacaacgtccatataacgttaaaa
aaacgttgaaacaacgttgtgtgccagctgggaaagtaATGGCTCTTTGA
AGTATTGCTTTGACCCCTCTACCTACGAGAAACTCGTGGTTGGCAGCGAA
TTTGTTAAAATACTATTTCAATCTGAAGAATAGTCGAGTCTGGGTTGAAT
CTCATACACAATTCATCCAATAATTGATCATATATTTTCGATAATATCAT
CCAATTATGAAATATTCCAAAGGTACCATTTACATCTGTTCTTGTCGGCC
CTTTTTACAGCTTCAAGGCATCATTGTGTTTATCAAGAGCTTTAAGTTTA
TCAAAATCACCACCAAAGTCTATGGCACAACGTTTGCCGAAGTAAGGAAA
ATTCTGGCATGTAGGACAATCTGGATTCGTGCAATCTCCATCACCGGTGC
ATATATGATAACAATTTGCAGACTCACTCGCTGGTCGCGCATTAGTTAAT
TCTACCATTATCAAAACAATTGTAAAAAGAACAATTGTTTTCGCCATGTT
TCTTGATAGTGATTTATAGTTGCTCttctttataataatttttgtttttc
actaCTGAGCAAGTTTTTGTTACACCCACAAGCTATGTACTAACTTCAAG
CTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073279-exon-scaffold_89-1491911889:139470..140724 | TCONS_00073279-exon-scaffold_89-1491911889:139470..140724 | Clytia hemisphaerica | exon |
| TCONS_00073279-exon-scaffold_89-1510915933:139470..140724 | TCONS_00073279-exon-scaffold_89-1510915933:139470..140724 | Clytia hemisphaerica | exon |
| TCONS_00073279-exon-scaffold_89-1575043694:139470..140724 | TCONS_00073279-exon-scaffold_89-1575043694:139470..140724 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_89 | supercontig | scaffold_89:139470..140724 . |
Blast
The following BLAST results are available for this feature:
|
