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TCONS_00073273 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073273
Unique NameTCONS_00073273
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1538

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073273 ID=TCONS_00073273|Name=TCONS_00073273|organism=Clytia hemisphaerica|type=transcript|length=1538bp
CTTATTTTTTggagtctaccattttaaaacAATGTTCATCTTAGTAAAAA
AAGAGTTATAATAAAGTTATGAGACGTTTTAGAGATTTCGAGGAGACAGT
CAAATCCTGAAGTTTTTTGGGACCAGAGACTTTTCGCAACATCTTTAAGC
AATTGATATACTACAGCCTCCATACGTGAAGGAATATATAATTGCCAGTG
TTATTTGAGCTACTTAAAACTTTGTGATCGAAATATGAAGAGAGGTTTTT
AGGCTTTTTGAAGCAACGGATTTGATCTAACgatctaaaaagcttttttg
tATCAAAACCGCTCTACCTTTTGcataaaaacgaaagcgaaagcaaTTGG
GTCATCATTTCTTGAGATCATCAAAAGATTGTATGAGATTTGTAATTTCT
ATTTGGGCACCAAAAGTGCGGACCAATAGAATATTACTTATTTTATTGGG
AACCAATCAACTGCGGAAAATATCAATAACATATCATTAAACGAATGCGA
AAATATTGGATTAATTGAATGCTTGAACCTTTTTTGAACTTCTATTGGct
aaaagtaaaacaaaagcTTGACATTCTATTAGAATCATCTGCAGTGAACC
AGATTCAATCAGGAAAAACTGACAACGGAAGATTCAGCACCACGAATAAT
CGACAATGGATGAACACGGCAAACTAACCATCTTTATCTTATTCCGTATC
GTACCCATATTTTTCCATTCGCTTGGTCTTTATCTGCTATTAACCATCAA
TTTTATGAAACGTTACCAAAGAATCCAAGGGCGATATCTCTTATGGTTAA
GCAGTATCGAAATCGCTATGAATGTAACCAAAATAGCAATTCAATTGACT
AAAAAATATGGAGATGTCGCTTTCTATTTGGATACATTGCGAACCGGATT
TATCGGGATGCAAATGTTGTTAATACTAATGGCAATGACGATTGACCGTG
CAGTTTATGTCTTTCTAAGCTTTCAGTATAAAATGAAGAAAGCTAATAAA
GCAACTAATAAGATCATCTGTTGTGTGCTTTTACTGGCTATTCTAGTCAC
TGTCACATTGTTTCTGACACAGGACACAAAAACACAACTCAGCCGTACAa
aagttgtatatttttggcCAATCATAGATGGAATCGTACTTTTAACATTT
GTTTTTTGTTACATATCAATGATCAAAACAACATCAGATCGAAGTAAGAA
ATTATTTGGTGCTGAATCAGAAAGGTTTAGAAATCGAATGCAGAAAGCAA
CATTGGTCCCGAAACTTATCGTATTTTCTTTCATCATATGCTGGTCTAGT
TCGGATATCATCTATCTAGGATTTGCGTTAGCTGGTAAAGAGGTGCCCAA
CTGGCTCATTCATGTCATTAACGTCTTTATATGTACGGGATATACAACCG
ACGCCGTCTTCTACATATATTTTTGTCGGCCAGTGAGACGTATGCTCAAA
TCAAAGATCACTAAATCACAAGCAGAGGCTAGGGTTGGTTATGATACAAC
TGCAGAATTTTCACAAGTGACAAGCAAcAATAACAATA
Run BLAST on NCBI

protein sequence of TCONS_00073273-protein

>TCONS_00073273-protein ID=TCONS_00073273-protein|Name=TCONS_00073273-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MDEHGKLTIFILFRIVPIFFHSLGLYLLLTINFMKRYQRIQGRYLLWLSS
IEIAMNVTKIAIQLTKKYGDVAFYLDTLRTGFIGMQMLLILMAMTIDRAV
YVFLSFQYKMKKANKATNKIICCVLLLAILVTVTLFLTQDTKTQLSRTKV
VYFWPIIDGIVLLTFVFCYISMIKTTSDRSKKLFGAESERFRNRMQKATL
VPKLIVFSFIICWSSSDIIYLGFALAGKEVPNWLIHVINVFICTGYTTDA
VFYIYFCRPVRRMLKSKITKSQAEARVGYDTTAEFSQVTSNNNN
Run BLAST on NCBI

transcript from alignment at scaffold_89:287972..297583-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073273 ID=TCONS_00073273|Name=TCONS_00073273|organism=Clytia hemisphaerica|type=transcript|length=9612bp|location=Sequence derived from alignment at scaffold_89:287972..297583- (Clytia hemisphaerica)
CTTATTTTTTGGAGTCTACCATTTTAAAACAATGTTCATCTTAGTAAAAA AAGAGTTATAATAAAGTTATGAGACGTTTTAGAGATTTCGAGGAGACAGT CAAATCCTGAAGTTTTTTGGGACCAGAGACTTTTCGCAACATCTTTAAGC AATTGATATACTACAGCCTCCATACGTGAAGGAATATATAATTGCCAGTG TTATTTGAGCTACTTAAAACTTTGTGATCGAAATATGAAGAGAGGTTTTT AGGCTTTTTGAAGCAACGGATTTGATCTAACGATCTAAAAAGCTTTTTTG TATCAAAACCGCTCTACCTTTTGCATAAAAACGAAAGCGAAAGCAATTGG GTCATCATTTCTTGAGATCATCAAAAGATTGTATGAGATTTGTAATTTCT ATTTGGGCACCAAAAGTGCGGACCAATAGAATATTACTTATTTTATTGGG AACCAATCAACTGCGGAAAATATCAATAACATATCATTAAACGAATGCGA AAATATTGGATTAATTGAATGCTTGAACCTTTTTTGAACTTCTATTGGCT AAAAGTAAAACAAAAGCTTGACATTCTATTAGAATCATCTGCAGTGAACC AGATTCAATCAGGAAAAACTGACAACGGAAGATTCAGCACCACGAATAAT CGACAATGGATGAACACGGCAAACTAACCATCTTTATCTTATTCCGTATC GTACCCATATTTTTCCATTCGCTTGGTCTTTATCTGCTATTAACCATCAA TTTTATGAAACGTTACCAAAGAATCCAAGGGCGATATCTCTTATGGTTAA GCAGTATCGAAATCGCTATGAATGTAACCAAAATAGCAATTCAATTGACT AAAAAATATGGAGATGTCGCTTTCTATTTGGATACATTGCGAACCGGATT TATCGGGATGCAAATGTTGTTAATACTAATGGCAATGACGATTGACCGTG CAGTTTATGTCTTTCTAAGCTTTCAGTATAAAATGAAGAAAGCTAATAAA GCAACTAATAAGATCATCTGTTGTGTGCTTTTACTGGCTATTCTAGTCAC TGTCACATTGTTTCTGACACAGGACACAAAAACACAACTCAGCCGTACAA AAGTTGTATATTTTTGGCCAATCATAGATGGAATCGTACTTTTAACATTT GTTTTTTGTTACATATCAATGATCAAAACAACATCAGATCGAAGTAAGAA ATTATTTGGTGCTGAATCAGAAAGGTTTAGAAATCGAATGCAGAAAGCAA CATTGGTCCCGAAACTTATCGTATTTTCTTTCATCATATGCTGGTCTAGT TCGGATATCATCTATCTAGGATTTGCGTTAGCTGGTAAAGAGGTGCCCAA CTGGCTCATTCATGTCATTAACGTCTTTATATGTACGGGATATACAACCG ACGCCGTCTTCTACATATATTTTTGTCGGCCAGTGAGACGTATGCTCAAA TCAAAGATCACTAAATCACAAGCAGAGGCTAGGGTTGGTTATGATACAAC TGCAGAATTTTCACAAGTGACAAGCAACATTAACAATAAAAATAATAACA ATAACATTGCAGTCATTTCTCAAACCAAATTATAATAATTGGGATGAATT ATGTATACAGTGTGTCCCAAAAAAAGCCGCATTTTTATGTAAAGTAAAAC CCTCAAAATTCATCATTTTAACTGGGCTTAGAACGATTGAAATAAGATTT AAATTCTCTGTTGTAATAAGTCACAAGATGATTGAAAAGGTTTTTGAAAT TAAATCAAATTAATTAAATTAAATTAAATTAATTAAATTTCGCATAAATT ATGAGATTTTATTTTATGTAAAAGTTTTGTTCGTTTTTTTTTGGGACACA CTGTATATCAAACTCGAAGGAAGAAATGATGACACTGTTGATGCGAAAAA ACGTCAAGTAAAGCTCTGATTGACTGAAAATTGCACACTTAAGCATCATT ATTCATTAATTATCATTAAACTATTATTGTTATTATTAATTAATTATCAT TATTTACTAATTATTAGTTAATCATTAACGTCAAAACAATGATTTCAACT GAACGTTTGTAAACCTGATGAAGACCTCCACTAAGGAGGTAGGGACCAGA GACTTTTCGCAACATCTTTAAGCAATTGATATACTACAGCCTCTATACGT AAAGGAATATATAATTGCCAGTTTTATTTGAGATACTTTGTGATCGAAAT TAGTCTGGAGATCCATACTCTCTATGTCCTCTATTCAAACTTACACCACA TAAGCAAAAATCCCATCAGAAGCTACTCATTGAGAGTATGGTATTTTTGA CCCAGTTTGAATTTGTTTACATTTGGTTTGAATTTCGTGCCAAAAAAGCC GTTGATAAGGTTTAGCCAATCAGATTCGCGCACTTCCAATCAAAACAACA AAATCACGTGGTTTCAACAATTGTTTAACAGCCAATAGAATTCTGCCACC AGATTTGGCATCTACAAAAATACCCGGCTACTCTGTTGCTTCTATATTAT TATTCGTTATAACTAAATATTATGCTTCGTAACCACACGAACAGAGTAGA CGGGTCTCCCAGCTAGATCGAAATATGAAGAGAGGTTTTTGGGTTTTTTG AAGCAACAGATTTGATCTAACAAGCTTTTTTGTTTCAAAACCGCCCTACA CTACCTACCTTTTGCATAAAAACGAAAGTGAAAGCAATTGGGTTCTAATG TCTATATTTATGATTGGCGTTTGATTTGGGTTCGATTGTTTTACTTTAGC TAATTACCACGTTCTAAAGCTTTTTTTTTTTTTTTTTCATCATTAATTTC TTCATCCCCAAAAGTATATTGGTTCTTCTTACAAGAAGTTGAAATATTTT ATGTATATGTAATGTATATAAATGTATATAAAATTCTACGATTCAAACTG ACACGGAGTGGACAGCTAAGTCAGTAATGGAAGCTTAGTGGGTTGGTTGG CTACATAGTATTGAAATAGTAAATCAATGGGCAACCTAATATAGAAGACG CTGAAAGATAGGTTCGTCAGATAATATGATATAGATAAAAAATCAGGATG GAAATTATCATAGCAGTTTGTCAATCAGTATCTGCATGGAGGAAGTATGA TTAGTGTTCAGGAGACGGCAAAACCAAATGATACACGCTTTGTTTTTATA AGAATACAATTTATTAGAATGTCCATGATGAAATGGACCGAATAGAGAAT ATCACCATCATGGAATTTAGCAACTGAACCTAAATATGCCATTTTTAAAG CATTTTCATCTATAAATTGCTAATAATACCCCAATAATGCTCAATATTTT CCAGGCGTGTATTAATATTAGGTTAAATTTCGATCTTAACCTAAGAATAC CTTAAGAATATTTTAGGATGATTTTCCCCAAAAAGTTAAGAATATCCATG ATAATGATGAAATGAAAAAACATCATTCTTTTAAAAAAGTGTGTATTTTG ATTATATAATATTTAGTAACTTTGCAACTGCAGTTGAGGGCGATCCAAAC GCTCACTTTTTGTCTTCTAAAGCTGATATCCCGGAGGAAAGGTGGACGCC ACTCCTTTCTCCGAATCTTTTTCACCCATCCTAAGGCACCTTATGGGTGC TTAATATAAACAGAGGGGGCTGGAAATATTTTCCTATTCCCACCGGGTTT TTACATTTTACATCAAAACAAGGTAAATTTTGTCAAAATTTGAAGTGATG ACGATTCTAGGTAAAACACAAAGTTTCTAAAATGGCTTTCTTTTGGCCAA CTAAAATATTTTCAAAAATTGATATGAAGTATATATAGATATATATATGA AGTCCATAGGTATAAAAATCTCTAAACATTTGTCAATATATTGTGTGTAT CGACTCCGAGTTAGGCTACCTATGTATTATACAATGTATATTTTGATATG ACTTAGGAAATGGAAAACGAAATTCAGGAGGAACTTCAATACGCCATGAT AGGGGGATTCAAAAAAGATTTTTAAAGTTAGAAATAAATGATTACTAGGA ATTTCTCAACCATTATGTGAGCGACTCACCCAATGATATTAATTTTACCA ATTAAAAATGCCATTAATAAGAATTGTCAAAACAATTAAAGTTAAATAGA CGGAAGTTTGTAATTATTAACTATTAACTTTCCTAGTTTCTAGTTCAAAT GTTTTGAAAGATCTTAAGAGTATACAGAACAGCAGTTTAAGGTGAAAGCA ATATCGGAGAAAAAAAGCATTTGGTATCGCATATGAGATGCTACAAATTT GACAGCCTTCATTTTTTGGCTATGTTTTAACCTTTACTAGATCCAGCAAG TGTTTTCATCTTTTGTTTTTTTGGAAAAAAAAAGCAACAAGGGAAAATAT TTTTTTGAAATATTTGGAGGTATTTTTCTATTTATATTTAAGAATTAATT GGTAATTTAAGAGGTTAAGTTTTAGTATAACTTTTAATTCTTTACGACGC CACGCCCTTTACCGTATCTAGCTAGAGGGCTTTGGTTGGCCGTCCGCCCG TAGTACGCCCCCGTCGCATTTGCTCCTTTCGGTAGAATCTATAAGTGGTT TAGAGCTATGACTTCGATCACTGATCTTCCATTCGCAAAGAAGCTCATCT TACAGTGAAGACAGAGAAAAATTTTTTTGTTGTTGTTGAATCTTCCAATA TCTCTCAAGGCAGGTCTATAACTATCAGTGTTACTAAACGTAAAGAGATA TAGAGTATGCACATTCATGGATATAAATGTAGTTTGTGCAGTGAAGCGTA CAATTTTCGTAGCACACGAAACGAAAGGAGACAACATTCAAACAGTAACT TTTTTTTGGAAAACTGTATGAAACACGAAACAAACCATCAAGATATTATC AAGTACATAACAATATCTGCAACTAACTTTGGCAAAGGAGATGGGCGGTG ATGAAATGTTGGGCCGAGGTGATTGTCGCTGGTTTTTGGAGTTAATGGCC AAGGGGATTGTCGTTGGTATTGGGAGATGTTGGCCGGCACACAACGTGGT TTTAACGTTCATCTAACGTTATATTGACGTTGTGAACGTTATATAAACGT TGAAAAAACGTTGTGTGCCAGTTGGGTAAGACTTATATTTGTGTAGGAGG GTTCACAGGTAGGAGCTTAGTTTTAAAAATGCCTTCTCTCACAAGCATAT CTCGCAATTTGAAAGAAAGTTAGGACATACAAAAAACAAACATCAAATTG AACCTAACTATTCATTTAGCGATTTAATTAACTGATAGTGAAAGATACCA TACAAATGCAAATCGAATTATTTTACATTCAAACATTTTTCTTGTCATTA AGTTTTACGAAGTTTCGAAATGTTTGAAGAGAAGAGAAACATCAGAGAAA AACGTTCAATGTCTTCATTCGTACAGAAGTAATCTTTAGTAAATCTTGCT GGTACATAAACATTGTTTTAACGTCTATCTGACATTATATACGCACCCTT TCAGATACTGAATGGATGTTAAGACAACGTCGGTTTTAATTTGGTAATTA CTACTGTAAGCTTTAGGTACTTTATGGGATATTAGGTAAGTCATGGCTCT TTAAAAAGTTAAAATTTTTAGGTAAAATATCAAAGAAAAAGACTGAAAAT TTAGAACCATTGTCGAAACTTTTTCCCGAATTTTAGCCTTGAGGGACAGA AATCGAGATTTATTCTGCTATTTATTGTAAACTGGAGTTAGATTTTGTGG CAACCCCTAATAGGATTAATGCGATGTAGAATGTAAAAAAGATTTCGAAG ATATAGCTAGAAGGCTAGAATACATGACTGGTTAGCCTAATGGTTTCATA TGGAGGGAATTGAGTTTAAAGACCGAAGGGCTAGAGTAGAATGTTTAACC TTTCTCAGGCAAGAAAAAGTGAAGCCACTTTATTTCCCATCCAGAACCCA CATAGAACGCGCCGTAATCATGACGACGGACTTTATCTAGCGGTTCCTTT GTTTTTGACGACTATGCATTTTTTTAAATCTAGCAATAGATTTTACTTTC AATCCGGCGTTTGTGTAAAAACCACACGCGGGCGTTCTGTATAGAGAAAC GAAGTTGCTTTATTTCCCATCTAAGAGTCACGAGTCTAGCCTTTCGGGCT TGGAAGTCAATGATGAAGAGGACTGATAACAGTAGCGTGTGTGCAGGGTG GTCAGGAGGAGCGGTGTCAGAGGAAAGGGTGGTCCGGACTAGTGGTTGGT CAACTACGGTCGATACACGTTTTTTTATAAGAACAAAATATATAAGAACA TGAAGCTTTGATGGCCAAATTGTTATGAACAAGTTAAGCGCGTTAAAAGG CTTTATAGACTCTAAAACAACCAAACTCTTAGGAAAATGGACAAAAGTGC TAAAAAAAAACGGTGAAAGTGAGAACATATTCAGAACCTTTTTAGGATTA CAACTCAAAAACTTAAGAAATTCCGAATGCGTCAAAAACTTGAATGTTCT CATAAAAAACGTGTACTCGAAAATGACCCAACGCGCTATGTTTTAGAAAA CTATTCTTTTGTATTTTTGTATCCTCTTTTGAAGATTAGTATCAGTAGCG TGGTGGCAGGAGGTAGTTCCTCCCAACGGCTGAATTATTTTTTTAGGTGG CGCCAAAATACAAAGGCTGCAAAAAGATGCATCTGATTACTAACTTCGAC GCCCCTTTGCTTTTTTACTCCTCAGAATCGGCAGCTTTCGGACAAAAAGA GAGAAAATATCTTTAAAAAATTTACCTCACTTTCCTTGCGTAAGATATGT ACTTTAAAAAATTGCCTCCATAGTTTGCGGAGTTTTGGTCGACTCACACA GCCACTGATTATTATTATAGGTACCTTCGGTCGTTATCAGTCAGTGTTTG CAAAGTTGACGTCACACGCTACGCCCCCTCGAAAGTTCTAGGCTTCTGCT CATCCTCTAGCGAAAAAAGTTTCTATATAGGAAGTATATAGATAGAGGTC TGCAATTCAAACTACGAAAATTCCAGCGGTTGATTTAGTGCTAACAATAA GCTTTTATATAAATAGTACTGTAGGAGTCCGAACTATAGACTGAATGTTA GAATATTGAAATATCAGGAAAGATTTCACCAATAATGTGGTTAACATTAT TATTTTATAATTGACAATATATTTTGATACTTTATGTATCATCCCAGGTA GTAAAAAGAATTATAGATAAAAGGTTGAAATAAGAAAATGCTTGCTAAAA TATTGAATTATATCGGCGCTCTTGAGGGGTTAACATATAGCAAAAGCTTT CAGCACTTCTTTCTCAGGACATTTAAAAAAGCGAGATTAGGTATCTGGAA TTCTATACGGCTACGGTTGAAGTGGCGAGGGTAACGGCGAGTAAGGCAAG TAATGGCGGGTGAAAGCAAGTTCGATATTTGACGTACGGCATTATGTCGA CTTTGCTTCTACAGTGTTTTTGTGTTTTTGCCGTACAAAACAAAGTAGAC AACGATATGTCGCCTTTGGTGACGACCCGTACGGGCAGCCCGCAACCGTA GCCATAGAATACCTCCGATACATAATTTCGCTAATGTATAGACTGTACAC GTACAAGCGTAGGATGAAAAGTATATAAAAAACGACGAGACGATGAGATT GTGAATAAATGGTATATAGAAAGTAAATAAGTACAGTTAACACTCTCTAG TTCGATTTTCAAGGGGAATTGCATTTTTATCAAATAATGGAGCGTATGGA ATAGTAGAGCATCGTTTATGAGAGTTTCTAATTAGTAAGACAGTTATTTA AATGGATTGTATATGGGACATTCCCCCAAGAAATTGTCGGGGATGTTTCT ATATCTGCTATCAAATGGTGCATAGGCCGCGGCGCTACAAATTTTCATTC CCTCGAAACTCAGCTTAAGCGATCGAAGTCCAACTTTAGTAAGGCAGTTG TTTAAATGGATTGTATGGGAACATTTCGAGAAATTGTCAACCATGATCGA AGCCCAATTTTAGCAAAAAAGAAAGAAGATAGGAAGCCTCCCTGTCATGA CACGACAGCAACGTTCTAAAGAAATACTCATCGACATTTTCTCGTTTTTT TTGCTTATTTTCTGCCACATGTTTTTTATAAGAGCATCCAATAGCCTTCA GATGTTCTTAATTTTTCGAGTTTTTAGCCTAAAAATGTTCTTAACATGTT CTTATTTCAAACATTTTGTGATTATTTTTGTCCATTTTTCTGATAAATCG GGTGTTTTAGAGCCTTAAAATGTTCTCAACTTGTTCCAAATATTTTGGTC ATCGAAGCCTTATGTTCTCATATAGTTTGTTCTTATAAAAAACGTGTATT AAAATTCTTTTTTTGTTAATTACAGCTAAAATAAATGAAAAATAAGTATT TTTGTAAATATGACTTGCAGAAGATAACACGGTTGCGGTGTTCTTTAAAC GAAACTCCAACCAAGAGATTATACAGCACCACTCCTTATTGAAGCCACCG AAACACTGAAGCAACCGCTTCAACATCAATCATATAATCTATTCATACAA ATTCNTATTACTTATTTTATTGGGAACCAATCAACTGCGGAAAATATCAA TAACATATCATTAAACGAATGCGAAAATATTGGATTAATTGAATGCTTGA ACCTTTTTTGAACTTCTATTGGCTAAAAGTAAAACAAAAGCTTGACATTC TATTAGAATCATCTGCAGTGAACCAGATTCAATCAGGAAAAACTGACAAC GGAAGATTCAGCACCACGAATAATCGACAATGGATGAACACGGCAAACTA ACCATCTTTATCTTATTCCGTATCGTACCCATATTTTTCCATTCGCTTGG TCTTTATCTGCTATTAACCATCAATTTTATGAAACGTTACCAAAGAATCC AAGGGCGATATCTCTTATGGTTAAGCAGTATCGAAATCGCTATGAATGTA ACCAAAATAGCAATTCAATTGACTAAAAAATATGGAGATGTCGCTTTCTA TTTGGATACATTGCGAACCGGATTTATCGGGATGCAAATGTTGTTAATAC TAATGGCAATGACGATTGACCGTGCAGTTTATGTCTTTCTAAGCTTTCAG TATAAAATGAAGAAAGCTAATAAAGCAACTAATAAGATCATCTGTTGTGT GCTTTTACTGGCTATTCTAGTCACTGTCACATTGTTTCTGACACAGGACA CAAAAACACAACTCAGCCGTACAAAAGTTGTATATTTTTGGCCAATCATA GATGGAATCGTACTTTTAACATTTGTTTTTTGTTACATATCAATGATCAA AACAACATCAGATCGAAGTAAGAAATTATTTGGTGCTGAATCAGAAAGGT TTAGAAATCGAATGCAGAAAGCAACATTGGTCCCAAAACTTATCGTATTC TCATTCATTATATGCTGGTTTAGTTCGGATATTATCTATCTAGGATTTGC GTTAGCTGGTAAAGAGGTGCCCACCTGGCTCGTCCATGTTATTAACGTCT TTATATGTACGGCATATACAACTGACGCCGTCTTCTACATATATTTTTGT CGGCCAGTGAGAAGAATGCTCAAATCAAAGATCACTAAATCACAAGCAGA GGCTAGGGTTGGTTATGATACAACTGCAGAATTTTCACAAGTGACAAGCA ACAATAACAATA

Coding sequence (CDS) from alignment at scaffold_89:287972..297583-

>TCONS_00073273 ID=TCONS_00073273|Name=TCONS_00073273|organism=Clytia hemisphaerica|type=CDS|length=1764bp|location=Sequence derived from alignment at scaffold_89:287972..297583- (Clytia hemisphaerica)
AATAACAATATGGATGAACACGGCAAACTAACCATCTTTATCTTATTCCG
TATCGTACCCATATTTTTCCATTCGCTTGGTCTTTATCTGCTATTAACCA
TCAATTTTATGAAACGTTACCAAAGAATCCAAGGGCGATATCTCTTATGG
TTAAGCAGTATCGAAATCGCTATGAATGTAACCAAAATAGCAATTCAATT
GACTAAAAAATATGGAGATGTCGCTTTCTATTTGGATACATTGCGAACCG
GATTTATCGGGATGCAAATGTTGTTAATACTAATGGCAATGACGATTGAC
CGTGCAGTTTATGTCTTTCTAAGCTTTCAGTATAAAATGAAGAAAGCTAA
TAAAGCAACTAATAAGATCATCTGTTGTGTGCTTTTACTGGCTATTCTAG
TCACTGTCACATTGTTTCTGACACAGGACACAAAAACACAACTCAGCCGT
ACAAAAGTTGTATATTTTTGGCCAATCATAGATGGAATCGTACTTTTAAC
ATTTGTTTTTTGTTACATATCAATGATCAAAACAACATCAGATCGAAGTA
AGAAATTATTTGGTGCTGAATCAGAAAGGTTTAGAAATCGAATGCAGAAA
GCAACATTGGTCCCGAAACTTATCGTATTTTCTTTCATCATATGCTGGTC
TAGTTCGGATATCATCTATCTAGGATTTGCGTTAGCTGGTAAAGAGGTGC
CCAACTGGCTCATTCATGTCATTAACGTCTTTATATGTACGGGATATACA
ACCGACGCCGTCTTCTACATATATTTTTGTCGGCCAGTGAGACGTATGCT
CAAATCAAAGATCACTAAATCACAAGCAGAGGCTAGGGTTGGTTATGATA
CAACTGCAGAATTTTCACAAGTGACAAGCAACAATAACAATATGGATGAA
CACGGCAAACTAACCATCTTTATCTTATTCCGTATCGTACCCATATTTTT
CCATTCGCTTGGTCTTTATCTGCTATTAACCATCAATTTTATGAAACGTT
ACCAAAGAATCCAAGGGCGATATCTCTTATGGTTAAGCAGTATCGAAATC
GCTATGAATGTAACCAAAATAGCAATTCAATTGACTAAAAAATATGGAGA
TGTCGCTTTCTATTTGGATACATTGCGAACCGGATTTATCGGGATGCAAA
TGTTGTTAATACTAATGGCAATGACGATTGACCGTGCAGTTTATGTCTTT
CTAAGCTTTCAGTATAAAATGAAGAAAGCTAATAAAGCAACTAATAAGAT
CATCTGTTGTGTGCTTTTACTGGCTATTCTAGTCACTGTCACATTGTTTC
TGACACAGGACACAAAAACACAACTCAGCCGTACAAAAGTTGTATATTTT
TGGCCAATCATAGATGGAATCGTACTTTTAACATTTGTTTTTTGTTACAT
ATCAATGATCAAAACAACATCAGATCGAAGTAAGAAATTATTTGGTGCTG
AATCAGAAAGGTTTAGAAATCGAATGCAGAAAGCAACATTGGTCCCGAAA
CTTATCGTATTTTCTTTCATCATATGCTGGTCTAGTTCGGATATCATCTA
TCTAGGATTTGCGTTAGCTGGTAAAGAGGTGCCCAACTGGCTCATTCATG
TCATTAACGTCTTTATATGTACGGGATATACAACCGACGCCGTCTTCTAC
ATATATTTTTGTCGGCCAGTGAGACGTATGCTCAAATCAAAGATCACTAA
ATCACAAGCAGAGGCTAGGGTTGGTTATGATACAACTGCAGAATTTTCAC
AAGTGACAAGCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045456XLOC_045456Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073273-proteinTCONS_00073273-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073273-exon-scaffold_89-1575043694:296056..297583TCONS_00073273-exon-scaffold_89-1575043694:296056..297583Clytia hemisphaericaexon
TCONS_00073273-exon-scaffold_89-1575043694:287972..287981TCONS_00073273-exon-scaffold_89-1575043694:287972..287981Clytia hemisphaericaexon
TCONS_00073273-exon-scaffold_89-1510915933:296056..297583TCONS_00073273-exon-scaffold_89-1510915933:296056..297583Clytia hemisphaericaexon
TCONS_00073273-exon-scaffold_89-1510915933:287972..287981TCONS_00073273-exon-scaffold_89-1510915933:287972..287981Clytia hemisphaericaexon
TCONS_00073273-exon-scaffold_89-1491911889:296056..297583TCONS_00073273-exon-scaffold_89-1491911889:296056..297583Clytia hemisphaericaexon
TCONS_00073273-exon-scaffold_89-1491911889:287972..287981TCONS_00073273-exon-scaffold_89-1491911889:287972..287981Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_89supercontigscaffold_89:287972..297583 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.293646 0.297396 0.0886749 0.118284 0.317592 0.0954186 0.681818 0.721185 0.130895 0.0885062 0.29336 0.0929253 0.0946684 0.204147 0.0221727 0.0808052 0.143433 0.187968 0.301694 0.204973 0.222708 0.528753 0.287286 0.752391 0.158842 1.0178 0 0 0.0869261 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073273 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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