TCONS_00073223 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073223
Unique NameTCONS_00073223
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6269

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073223 ID=TCONS_00073223|Name=TCONS_00073223|organism=Clytia hemisphaerica|type=transcript|length=6269bp
attttaatggcTGCATAATAAGTATATATTAGATGCATGTACCAGTACAA
AATGAAGATTTCTATCAAGGCCGCTAGAAATGACATGTTATGGATAGCAA
CAGTCGACCACAGTACGCAGCTTATCCTTCATCGACACTACTACTGACCA
AAGATAATTTCAATAACGCAAATACTGCCGCAACTGCCGTCGGAGCGAAT
CCCGTCgcttcaacacaaaaagtatACACAGTATCTAATTATAACAATTC
TACATCAGCCGCTCAACCATTGCATCAGCAAAGATCGCCCCCTATACCGC
CTCAAAATTACAACATCCAATACCAGCCACAAACGGCTACCTACCATCAA
TCCCATCAACCCTATATCCAACACCAACAACAGCCACAGATTCGTGGAGG
ACATTTAGTAGATAACAGAAAAGCGAGCTCATTACCTCCTATAAGAGAAG
AATATATTGACCGTTATCCTCAAAGTCAATCACCTCAACAGTACTtgcaa
cagcaacaacaacagcaaaaaCCAATTGTGCAACAGACTTTCCATTACCA
ACAGCGACATTCACCACAATCGCCACAACCTTACCAAAACAACTTTGACC
ACCAAAGAATACAATCACCAAGACATCACGCAACATCTCCAGGACCTGTC
CTTGCAAATCATCCTCAGCAACCAATACAACAAGTCGTAATGAACTCTCG
AGGATACACAACCGTACCACAAAACATACCAGAACCTTCAATTGTACAAC
CTGGTGCAAACAACATggctcaacaacaacaacttcaGCAACAGTCACCA
CACCTCAATCCATCATCCTCCCCCTATTCAACTTCTCCAGCTCAATCCAG
AGGATCATACCCGAACTCTCCAGCGACAGGAAATCTTCAATACATCCAAC
AAACTAAAAATGATGCAAATTTAGTTCAACAAGCAAACGACGTTCTAGCT
TTATTGGATGAAAAGGTACCGGGAGGTGACCCTTCACAGCCTATCTATCA
ACAGCAGCTCTCGCAAGGAGGTCAGCTCCCACCCGGTTACCCCACACAAG
GGGATTACTCTCAGAGTCCACCTAATCTTTTATACTATCCATACCATAAA
GACTTTTTAAATTCTTCAACTGAGAATTCAAACACGACGTATTCAGTAAA
ATTAGCAAGCGGTGTAGTTCACCAATATCCAACACCAGACTATAACGCTG
GATCACCACAGCAACAGTCCCAACAACCGCAGGTTCAAATACCACTTCCG
GACTATCCAACATCAAACGGTTATATAGAAACGAGTAAACAAAATAACGC
TAATCTTCAACAAAACCCGGCCTACAATCCACCACAAACACAACAACCGG
TCGTCAATAATAACcaaatttatcaacaacaacaacaacaacctcaAAAC
ACACAGACTGTTGCCGGTCAACAGTTGCCGCGATACGATGAGGTACAACA
ACAAGGAATGGATCGATATCTTAACCCAACGTCTCCAAACCaatacaacc
agccacaacaaCAGCAAACACCTCAAGGAAACAAGCAACCATCCTTACCG
ACATCACCTCAAACTCACGGAGCCATTTACAACACTGGTAACATCCCTGT
ATCAGACTACAACAGTTATCGCACCAATAATTTAGACTCGCCTCAAGGTA
GTCCGATGCCTGCCCCGAACAACCAAGTGTCACCAAATGCTTTTAAACCA
CCCACCGGGACACCGCCTTTGCAACGTAAAACGCAGCCTGCAAGGCAAAT
TTCAAATGAACTTTATGCTAATATTGGATCACCATCTAACCAGCTTTTGT
TAGGTGACATGTCTCTCAACAGTCCACGACCGCGATCAGAAACTGTAGAT
ATGGAGGCTCCTAATCTTCCATCTAGAAGCTCGAACACAGCTAGTGACCA
GCAGCCTTCCATACCTACCACAACAGTCTACTACGAGATGCCTCCTCCGT
CGATGCCACCTCCTTCCATCCCGCCACCAACAATCCGCTCCTCTACATCT
ACCAGCCAAGCAACCATCCAGGCCAATGCATCACCTCAAATGTCAGCTGA
GAGGCGCTTGAGATCAGGGACAGTAGAGATGGTTGACGCTGGAACACGCC
CAGGGAGCACACCCCAGATGAGTACGGCAGCATCACAGAGGTACTTGCCT
ACTGCCCAACTGTCAATGCCACAACGGAGTCGCGCGGGTACAGTCGAGAT
GGCTGATGGTACAACACCTGCAGGTTTGAGTTTACCAGAGAGAAGGATTA
GATCAGGTACAGTTGAAATGACTGAAGTTGGTGGTGGACAACAGCCTCAA
TTATTGATAGAACAAGGTGCTAATCAACCTTCCCAAACAAATTATCAAAC
CTACCATGTACCTAACTCACAACAGCTTCAGCAAATAGACACGACTAAGC
AAGTGAATAACGGTCAGAAAGGTAGCATCCAACAACAGCAACAAGCTACA
GTCAAAGCCTCGCCACCTCCATACTCAACTCAATCCACAGCCACATTACA
AAGCCAAGTTTCGTCTCCTCAATCGCCAGTGTACGCTACAGTCAGTACCC
CAAATGTTTCAACACAGCAGGCGGCTCCCTCCACATCTATACCTCCCCAG
TCGCACGCTACCTCCAACAAGCAACTACCTCCAAATCAACAGTATGTCAC
CCCGAATAAGGCCACCTACCCTCAGCAACAGCAACAGCAGCAGCAACACA
CAACCCCGCTTCAGCATCAACCTTTACCGTACAACCAGCAACAAGGGCCA
CCGGCAAGTCATACAACAAGCaaccaacaacaacagcaacaacagccTCA
TACTAATGGTACTACAGTAACGGATGACAGAGGATACACACAGCAGATAA
GCCAAGATGGAAGAGGCACACCAGTTATGTATTATAAACAAGACGGGCGC
TCAAGTTTACCGCCCTCTAATACCGCCCAACCGCAACAATCTCCTAATCT
CTCATCATCCGGAATGCCCAGTCCTGCATCTCAACTCAGTgttgaaaact
tgaaattaaGTCCTCAATTACAGAAAAATGGTACGACGACTgtacaacaa
caacagcagcaaCAACAACCAAAGAAGGATTATGACCCTAATCAGCAGCA
GCAACAGCCTAATCTATACGCGACCGATCAGGAACAAAAGATTATGCAAC
AACAATATTTACAACGCGTTCGTCAAGCACAGCTTCAAGAACAGTTGAGA
CAGCTGCAATCCGAATACGAAAACAGTCTACAAGTCGAACATGATATAGC
GTTTGAATTCCTACGCGAGCAAGAGCTGAAAGATGATACGTACAGACAAC
CGGGCAACACGTCTGCAACATCAAACACACCAGCCCAACAGAACACACAA
AAGATCCCTCAACAACCAAACAACAATTACAACCAACAACACCCATCATC
AACACCTCCATTACAACATTCAAACTATCGTCAACAACCTCAAAACGCCC
ATCAGCAATACATTCCACCCAACGCCCAACAGCAGCAACAATCACCAAGG
AATTATCCGCCGCCCCACCCATCGCAATACCAACAAAACATACCGCCCCA
GATGGTTGGTAACCATCCGTCACATCATCAACAGCATAGAATGCAGCAGC
AGCAACAATACAAAGGGGAGGTACCTGTCTTCCCTGTAACCGGAATCCCC
ATCAACCAACCTATGTACCCCTCCCAACGTATGCCCTACCAACAGCAAAT
GATGAATCAGAAAGGTTCCCAACCCATTGTAATCATGCCTGGAGGAGGTG
GTATCTCGAATCCTGGCCAGTTTCTACCCACCTCAGGAGGACCACATCTT
ACGGGACATCACCCAGTTTCGCAAAGAAGTAAACCACCTCAAAGTTCAGG
AGGGTCCTCTTCAGGAATTAAACAACAAACACCGTTCCAAAAACTACGAA
AAATTGCGGAAGAGATTTCATCATTTGTTGATGACGTCGTCAAGTTTACA
GGAAAGAAAGGTGATCACGAATACAAATACCTCGAAGAAATGCTGTCGCA
GCAAGTTTTACTCTTGGACAAAGTTGCAGCCAGCGGAAGCGACGAGTTGC
GAAACGCAAGGAAAGCTCTGGTCAAGGAGGTACAAGAACTGTTGGAAATT
CTGGAACGCAGAGCGACCTCAAAGAATTAAAGATTTTAAATGGGTAATAA
AAAGGAAATATTTACCGTGACTTCCACGAAAGGTCTTCTTTCAACACAGC
TTTTCAAACGGTGTGGTTCTTTTCGTACACATGAGTTTGTAAATGCTGAC
AATGCTTTTTTGGAGTGCTTTCGAAAATGATCCGTTGCGGTATATATCCA
AGACTATTCTGAATGATATGATGGTATGAGGTACGTAATCTTAACGTCAT
GGACGTAATTTGGACGTCATTTCGATGTATTATACCGACCGGCTTATAAT
CTTTATCATCCACTTGCTAGGTCGGAATAAGGGAATGAACTTGATATGCT
AATTCACACTCAGCTCACAGACAGAAACTCAAGAAATTATAATTTAactg
ttgttttgttttctttgtttcattTTAATAACAAACTTTTAAATACGTAT
TGCTTAGAAAACTATTTTGGTGCATGGTGATAGATTTTGGAATAACATTT
CAAGTGTATacaccactgacctttatatatccctggaccaagcaatatct
gccatcattgattgaagtttttttgatttggtacccgagaagaagccatt
gcaatgttaaaaatcaacgtctaacgccgctacatcatcaaaagaatttg
aggaaaagtagacctagcgctgtcgatgcatttacaccaccatcgagtag
tgccgccattagggtaccacttttcaaaatactccgatcaaagattttgc
ttggctgggattgagaagctttgtccagggtatataaaggtcagtgtatA
CACaaacttcttttgaaaaaaattatcagattTTGGGCTGTAATATTATT
AGAAACTGTCTGAAACCGACAATCTTCATGCTGGGCCTTAAGTGGTTTTT
CTAAAAACAGTACCCTTAAAATGAAGAGCTAAAAACATCTGAATTGTCTT
TTGACAGCCAAGtttttatattttgggtaccatttttttttcaaaaagag
gtTTATCTTATCATTTGTCTTCTGTGTTATactagctggcacacaacgtt
gtttcaacgtttatctaacgttcacaacgtccatttaagttagattaacg
ttgaaacaacgttgtgtgccagataTGTTCTACTACGTAGTGAACTTGTA
AATACGATACAATTATGTTAGACAAGGTGCCTTTTTAGGGTATTTACAAA
GTGGATTTTTTATGCACAAACAAAGTTATACTCAAAGGTGACACTACAGC
AACGGCTGAAATCACGAAGAAATTTTTCGATGATACTTAATTTTGATGAT
ACTTTCCATTGGACACAATGTGaagtttctgaaaattatgCTGAAACAAT
TTCAGGCGAAAAATGATGATAGAATGATGTCTTTTTTAGTATTTTCGAAG
GGACAGTTATAAATGCCGCTTGGTAGTTTCCATCCACTATCATTGGGGTA
GTGATTTTTTTGCAACCTtcgttattttattttattcgtATTTTTTGTTA
GTGAAAAGgaaaggattttttattttacccTCGATGGTAGTGGATGAAAT
ATATCACCATGCATAGTCAGCATAtaacaccctcttctcacagacccagt
agaaTCTTTTCAgctagtggggataaaattgaaactcaatggagattgat
attcccatattgtttatgactggggatttcaattcttttgttttccactC
AGAAAATTCATTGGATATGAAATAAGCATCATATTCTGCtaaggatttgt
ttatttgattattttcagtggggacaaaaattggaggataattttccacc
ggggacgatattttggacaatttttccagttggtctttgagaagggggtg
tcataTAGCAGTACACCATTAGGCATCGAAGTCGATCTATACATATATAA
AACTGCTTACGGATCTTGTAGAAACCCTGCAGAACAATGCAAGATATTTA
TTTGAACCATCAACAATATAGTCAAttcgttttaaaattattcttCAAAC
TTTTAACGTCGAAGGAAGCGCTCCAAATTGATGGACTATACAgtattact
ctcgggtacctaatagccggggggagcgctaattaatttttcgaaaattt
tccacccaggacattcttattccaaccctcttattaaattttgagatttt
ttccaaccccccccccccN
Run BLAST on NCBI

transcript from alignment at scaffold_88:334445..346112-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073223 ID=TCONS_00073223|Name=TCONS_00073223|organism=Clytia hemisphaerica|type=transcript|length=11668bp|location=Sequence derived from alignment at scaffold_88:334445..346112- (Clytia hemisphaerica)
ATTTTAATGGCTGCATAATAAGTATATATTAGATGCATGTACCAGTACAA AATGAAGGTTAGTAAGGTATCAATTTCTTTTCGTTTTGCTCGGTCAAGGT CCATAGACTCTTCAGAAAAGCATGGGGAAAATTTGTATTGTCAATCAAAC ACAGAGCAGTTTGTTTTGGTACCAATTTTACCCAAAAAGATATAGCTAAA GGCTAGAGGTCAATATGTGGGATTTGAAGCCACAATGTGATGAGTGTATG TGGACCATATAAATAGTTTTTTGGTATGGTAAGGGCTATGACATACTTTC AACTAATTTCGTTAGTATACAAGAAAGCTTAAATTATTTACTAGTACTCC AAACCATATTGAAAACTATATTTTTGTATTCCTCCTATAAAGACAAGTGC ATGCTGAAAATCTGAGCTCAAAAGATTTTTCTATCAATTTTATGACACGG TTAAATCCCTTATAAAAATTAAAACATGCAGCCCGGCCTCGTTTCCATGT AATTCTATTGTTTATTAAGAAATTTCAAATCAAAATAACTCAAGAACCGG AAGTATTTTTTTCATATTTCTTTTTTTTATTTGTTTAGTTTTGCGGTACA TACAATTTTATGAAACTAAAAAGAAACATCCAAACATTAAAACAAAAAAA TGACAATTCGGGAAGAAGGGTGTATACTTACTATCTAATGTTTTAATACC TACTACCTTGACAATGTTCTCTTTAGCGTTTAAAATGTAAAACTCTTTGT CACTATTCATGTCACAACATACAACAATTGGCAAGTATTTCGCAAGGGAC CAGTTGTGTAACAGTCCACTATACATAACTTGAAATAGATATGTATTTTT TCTATTTTGATCTTGGTAATCCTTTTCACTTTTCAAGAAAAACTATTATT TGTGACCATACTGTTATCATGCATAATTCATACAATTTTTTGTATTCCTT TACTTTCAAGGATGTGATACTGTCCTCTAATTCTCTTTGCTAATTTTTGT ACTTTCTTCATTTCATTGTTAGTTCTTAGTCAAGTTACAACCTTACGATT CAATACTGAGGCAAAAGTTTTGTTGAGATATATATGTGAAGAAATTCATA GAATTTCGGTCCAACTATCTTCTTTCAGGAGATTTGGGTGGCAGAGCAGT ATATGCATTTCGTCCTTATTAGGGCTCGTCAGCACTGCATACTGCATACT ATATATACTGTACCGTAGTCGACTTTACAAGATGTTACTTTGTAATTTTC TGTAAAGGGGCTAATGCTTTGATTGATACCTGCTTTTGTTTGGGAAGGCA CAGAAAACCATTATTACCTTTTGGTAATAATTTTTTGTTGTTGTCGCTTA GCAACTTTAGAAGTCAGTGTTTGCTGATTTTTGTGGGTGTTTTCATCCAA AAAAATAGGTAACGCTTAGTTTATCAATGAATTTATAGATTTATGCTGCT AATTTTTTAGTTCTTATATCCAGCTGATTGTTTTGTCAAGCTAAACAATT TATTATTCAATAATTCACGCTTATTTTAATAAGAACACGCTAAATTTTTG CTGAAACCTAAGAACAAATTCTTAATTTCGAGAAAAATCGTAGACTCAGA TTTTAGAAATGACTTTGAAAATACTCTTTTAACCCCCTCCCCTCCACCTT TTAACTCAACGAGAATAGAGTAAGTATAAAAAGCTAATCAGATAGTTTGA GCTATTTTTGCTTGCAGAAACCTTATACGGTCCTCAATGAAAAAGTATTT CTTAAAAATCCAGATATCACAGCCTGAAATTTTTTTAATGGGGTAGTTCA CGGTTCTTACATTGAAATTCTATTGTTTTGCTGTCAAAAACTCATAACTG AAATACCTTGATTTGAAATAGCCAGGCAAAAGGATTTTCAGGTTTTCCTT AGGACTATAGGAGGAATCTACATGCCAAATATCTCAAACCATCCGGGGGG GGGGGTTAGAATTTTACTGAATTTAAAAGAAGGGGAGTGGGCTTGTGAAA ATATCAAATTATATATTTTATATGGATTACTCGGGCAAAAAGAGGGGGTG ATGTTTTAGGGGGCGATGTTTTAGGGGGCTTGGAAGATTTGGAAATTTGA AAAAGTTTTTTTCCCTCTTATTTTTAAATTTCTCCAAAAATAATTTTCCG TTCATTTTTTTCTGTTGAAAAGTAATTTCTGTCCTCAGATTCATGTTATA TATTCTTCATTTTGATAACCTTTAGAATATACTACGAGAGTGTAAGAGCA AGGTCAAAGTTTTAATTTTTAAGAGGGGGGTTGAACTAAAAGAGGGGGTT GCCATTTTTAAGGGGGCCTTTATACCCTTATGCACACTATGTAAATTATA GTATAAGCTGGTATAAGTAAGTGTGTATTCAGGTTATGTCTAAAAGCCTG TAAATATAATACCAGTCGAACCCTAGAATTACCTTGAATTTCAAATAGAT CGCATTTTTACCTTGGGTTTTTAATTTCTAAGACCAGGTGTCTTTAAAGG ACCTCATTATTACGTCCAAGTTTCTTCCATACAATAAATAAGTTCTTGTA ATTATTATCTTTTCTTTCGACAGATTTCTATCAAGGCCGCTAGAAATGAC ATGTTATGGATAGCAACAGTCGACCACAGTACGCAGCTTATCCTTCATCG ACACTACTACTGACCAAAGATAATTTCAATAACGCAAATACTGCCGCAAC TGCCGTCGGAGCGAATCCCGTCGCTTCAACACAAAAAGTATACACAGTAT CTAATTATAACAATTCTACATCAGCCGCTCAACCATTGCATCAGCAAAGA TCGCCCCCTATACCGCCTCAAAATTACAACATCCAATACCAGCCACAAAC GGCTACCTACCATCAATCCCATCAACCCTATATCCAACACCAACAACAGC CACAGATTCGTGGAGGACATTTAGTAGATAACAGAAAAGCGAGCTCATTA CCTCCTATAAGAGAAGAATATATTGACCGTTATCCTCAAAGTCAATCACC TCAACAGTACTTGCAACAGCAACAACAACAGCAAAAACCAATTGTGCAAC AGACTTTCCATTACCAACAGCGACATTCACCACAATCGCCACAACCTTAC CAAAACAACTTTGACCACCAAAGAATACAATCACCAAGACATCACGCAAC ATCTCCAGGACCTGTCCTTGCAAATCATCCTCAGCAACCAATACAACAAG TCGTAATGAACTCTCGAGGATACACAACCGTACCACAAAACATACCAGAA CCTTCAATTGTACAACCTGGTGCAAACAACATGGCTCAACAACAACAACT TCAGCAACAGTCACCACACCTCAATCCATCATCCTCCCCCTATTCAACTT CTCCAGCTCAATCCAGAGGATCATACCCGAACTCTCCAGCGACAGGAAAT CTTCAATACATCCAACAAACTAAAAATGATGCAAATTTAGTTCAACAAGC AAACGACGTTCTAGCTTTATTGGATGAAAAGGTACCGGGAGGTGACCCTT CACAGCCTATCTATCAACAGCAGCTCTCGCAAGGAGGTCAGCTCCCACCC GGTTACCCCACACAAGGGGATTACTCTCAGAGTCCACCTAATCTTTTATA CTATCCATACCATAAAGACTTTTTAAATTCTTCAACTGAGAATTCAAACA CGACGTATTCAGTAAAATTAGCAAGCGGTGTAGTTCACCAATATCCAACA CCAGACTATAACGCTGGATCACCACAGCAACAGTCCCAACAACCGCAGGT TCAAATACCACTTCCGGACTATCCAACATCAAACGGTTATATAGAAACGA GTAAACAAAATAACGCTAATCTTCAACAAAACCCGGCCTACAATCCACCA CAAACACAACAACCGGTCGTCAATAATAACCAAATTTATCAACAACAACA ACAACAACCTCAAAACACACAGACTGTTGCCGGTCAACAGTTGCCGCGAT ACGATGAGGTACAACAACAAGGAATGGATCGATATCTTAACCCAACGTCT CCAAACCAATACAACCAGCCACAACAACAGCAAACACCTCAAGGAAACAA GCAACCATCCTTACCGACATCACCTCAAACTCACGGAGCCATTTACAACA CTGGTAACATCCCTGTATCAGACTACAACAGTTATCGCACCAATAATTTA GACTCGCCTCAAGGTAGTCCGATGCCTGCCCCGAACAACCAAGTGTCACC AAATGCTTTTAAACCACCCACCGGGACACCGCCTTTGCAACGTAAAACGC AGCCTGCAAGGCAAATTTCAAATGAACTTTATGCTAATATTGGATCACCA TCTAACCAGCTTTTGTTAGGTGACATGTCTCTCAACAGTCCACGACCGCG ATCAGAAACTGTAGATATGGAGGCTCCTAATCTTCCATCTAGAAGCTCGA ACACAGCTAGTGACCAGCAGCCTTCCATACCTACCACAACAGTCTACTAC GAGATGCCTCCTCCGTCGATGCCACCTCCTTCCATCCCGCCACCAACAAT CCGCTCCTCTACATCTACCAGCCAAGCAACCATCCAGGCCAATGCATCAC CTCAAATGTCAGCTGAGAGGCGCTTGAGATCAGGGACAGTAGAGATGGTT GACGCTGGAACACGCCCAGGGAGCACACCCCAGATGAGTACGGCAGCATC ACAGAGGTACTTGCCTACTGCCCAACTGTCAATGCCACAACGGAGTCGCG CGGGTACAGTCGAGATGGCTGATGGTACAACACCTGCAGGTTTGAGTTTA CCAGAGAGAAGGATTAGATCAGGTACAGTTGAAATGACTGAAGTTGGTGG TGGACAACAGCCTCAATTATTGATAGAACAAGGTGCTAATCAACCTTCCC AAACAAATTATCAAACCTACCATGTACCTAACTCACAACAGCTTCAGCAA ATAGACACGACTAAGCAAGTGAATAACGGTCAGAAAGGTAGCATCCAACA ACAGCAACAAGCTACAGTCAAAGCCTCGCCACCTCCATACTCAACTCAAT CCACAGCCACATTACAAAGCCAAGTTTCGTCTCCTCAATCGCCAGTGTAC GCTACAGTCAGTACCCCAAATGTTTCAACACAGCAGGCGGCTCCCTCCAC ATCTATACCTCCCCAGTCGCACGCTACCTCCAACAAGCAACTACCTCCAA ATCAACAGTATGTCACCCCGAATAAGGCCACCTACCCTCAGCAACAGCAA CAGCAGCAGCAACACACAACCCCGCTTCAGCATCAACCTTTACCGTACAA CCAGCAACAAGGGCCACCGGCAAGTCATACAACAAGCAACCAACAACAAC AGCAACAACAGCCTCATACTAATGGTACTACAGTAACGGATGACAGAGGA TACACACAGCAGATAAGCCAAGATGGAAGAGGTATGCCACATGTTTTCTT TTCTTAAATATAATTGAATGTTCTGCAACTGCTCGTCAACTAAAATCGAG GACCCTAAACTCTCCTTGATACTTGGAAATAAGAGACAGGTTAAGACTGG TTTAGAAGATGAGAAAATAAAGACGGGTATTGTGATGGGAACTCAGATAA GCAAATAATCAAAATTGTTCTACCCAAAATGCTTTTCTGTACAATGATTA CTTAATAATAATATTAGTGCTTTGATCTGAGGATCACGAGTTAGGTCGTA TCTTTTTTTATCCTTTCACATTGGCTAATTTATCCACTTTAGGCACACCA GTTATGTATTATAAACAAGACGGGCGCTCAAGTTTACCGCCCTCTAATAC CGCCCAACCGCAACAATCTCCTAATCTCTCATCATCCGGAATGCCCAGTC CTGCATCTCAACTCAGTGTTGAAAACTTGAAATTAAGTCCTCAATTACAG AAAAATGGTACGACGACTGTACAACAACAACAGCAGCAACAACAACCAAA GAAGGATTATGACCCTAATCAGCAGCAGCAACAGCCTAATCTATACGCGA CCGATCAGGAACAAAAGATTATGCAACAACAATATTTACAACGCGTTCGT CAAGCACAGCTTCAAGAACAGTTGAGACAGCTGCAATCCGAATACGAAAA CAGTCTACAAGTCGAACATGATATAGCGTTTGAATTCCTACGCGAGCAAG AGCTGAAAGATGATACGTACAGACAACCGGGCAACACGTCTGCAACATCA AACACACCAGCCCAACAGAACACACAAAAGATCCCTCAACAACCAAACAA CAATTACAACCAACAACACCCATCATCAACACCTCCATTACAACATTCAA ACTATCGTCAACAACCTCAAAACGCCCATCAGCAATACATTCCACCCAAC GCCCAACAGCAGCAACAATCACCAAGGAATTATCCGCCGCCCCACCCATC GCAATACCAACAAAACATACCGCCCCAGATGGTTGGTAACCATCCGTCAC ATCATCAACAGCATAGAATGCAGCAGCAGCAACAATACAAAGGGGAGGTA CCTGTCTTCCCTGTAACCGGAATCCCCATCAACCAACCTATGTACCCCTC CCAACGTATGCCCTACCAACAGCAAATGATGAATCAGAAAGGTTCCCAAC CCATTGTAATCATGCCTGGAGGAGGTGGTATCTCGAATCCTGGCCAGTTT CTACCCACCTCAGGAGGACCACATCTTACGGGACATCACCCAGTTTCGCA AAGAAGTAAACCACCTCAAAGTTCAGGAGGGTCCTCTTCAGGAATTAAAC AACAAACACCGTTCCAAAAACTACGAAAAATTGCGGAAGAGATTTCATCA TTTGTTGATGACGTCGTCAAGTTTACAGGAAAGAAAGGTAAATTAAGGCC GGTCTCCACTTTCGCGCGACATGAGCGAAAACTTTTTGACGTTTTTGTAA GGTCAATGGTCGGTTGAAAAATGAAGCAACTCCATTAGTCAAAATCGACG TAACGGATGAAAAAAGTAGAACTTCCTTCAACTTTTTTTTTGTTCGCGTG GAACTTTTTTATGACATAATCTTTTCTTCAGGCAAAAAAGGTTGAGAAAA AAAATGTCGCCCATTTCGCGCGAAAGTGGAGACCGGCCTTTAACTATCAC TTATTCAAACTAGTTTCTGGTCCCTAAATTGCTTGCTTTGAATAACAAAC GCCTTTTTTTGACATTTAAAATGGACATTTTAGATTTTTGGACATAAATT TTGTGCCAATGAAATAAACCAAAAAGTAAGTTTCCTCTTCACGGTTCCGA AACAATTTTTGAAAGATCTCTTTTTTACTGCCTACAATATGGAATCAAAA AGAGAAACTTATTGCTAGCACATCCGATATATTAAATTTTATGTACTGAA ATACCCGAGAAAGACTAGCATTAAAGGTTTTGTTTTGATTGAAAGGTCTG ATGATGCTGATGTAGTAAAAACAAGTGCGACAAGATTAGAAAAGGTTTTG AAAAATGAAATTACACTGAATAAAATAACATTCCTCAAACACATCTCGAA ACAACTTTTGATCTTTCACTTGTTTGCAGAATATCGCTGCATAAAAAAGT AGGTTTAATTTATATGACGCAGCATGAAGACATTGCCTAAAATAAGCTCC TTTTATTCCCGTAGAAAACCTTTAACAGCTAGCTTCATAACAGGAAATTC GGAAATTATACCGGGTGCACCAAAAAAAAGTATACAACTTTGTCGAGATA TTATGAGCTTCATGATTTAAATTTTTTGTTCATTCTTTTTTTATTGTATA GAGGATGCTCTAACTTGAATTTTGAGTTATCATACATTAAGTTTGAAAAA GTAGTTCAAAAGTCATTTCCAAAAAACTGACTTTTTTTCCATGACGAAAT TTCAAAAAATCATTAAAAACAGCAATCACGCTATAAATAAGACAAAATGA CAAAAACACAATTTCATTGTTTCTTTTATTTCTTTTTCTCTTGTCTTATA TTTTGCCAACGGTTTGTCCATCTTATTTGCACGTCATGAAAATGTCCAAC CCCAGTAAACTCAATGCAGACCCAAGTTCTTTGAGCAACTAGTCGAGGAA TGGTGATCTATTTTTTTCAAATTTTTTTTTCACATAGCACACACATAACA TCAAAACCTCTCTTGGAGATTTCCAAAAAAATCTTTCAGCCTTTCCAAAA ATATTATCCTACGTGGGAATAGCTTATTTTACCATATTCTTAAATTCCCA ACGAGCTTTGATGAACACAATTGCATTTTTTTGGTATTTTAATGTGTAAA GAAGGTATAAGTGTCTAGAGAAAAGTTTGCTCGCTGTTTTTAATGATTTT TTGAAATTTCGACATGGAAAAAAAGTCAGTTTTTTGGAAATAACTTTCGA ACTACTTTTTCAAATTTTATTGTATGATAGCTCAAAATCTAAGTTAGAGC ATCCTCTATGCATTAAAAAAGAATGAACAACAAATTTAAATCCTGAAGCT CACAATATCTCGACAAAGTTGTATACTTTTTTTTGGTGCACCCGGTATTC CGGACTTTTTACGGTGTTTTCGTATCTCGTCATAATTTGGTAATATACCT TCTCTTTTTCAACAGGTGATCACGAATACAAATACCTCGAAGAAATGCTG TCGCAGCAAGTTTTACTCTTGGACAAAGTTGCAGCCAGCGGAAGCGACGA GTTGCGAAACGCAAGGAAAGCTCTGGTCAAGGAGGTACAAGAACTGTTGG AAATTCTGGAACGCAGAGCGACCTCAAAGAATTAAAGATTTTAAATGGGT AATAAAAAGGTAATTACAATATTCATTTTACTTTTGAAAGTCAATACCAT TGAATGACGGAAGAGCATGAAATGTCTAGCAAAAAAGGATACCTTAAGTG GATGAATTTTTTGGGACTTATTTTTCGCGTATCGGCCCTTTTTTCAACAC TATAATTTCGGTCTTTTCCTAGGGGTTTTAGTAAACTATATCGTTTTTGG CAAAAATCTTAGTTTCAAAATTTTCGTGAGCATTAAATTTCGAGGATTTT TTAAAAACTTGCGAAAATCGCGAAATGTAAATTTATCAACTGAAGGTACT ACGATAAGTCCCTTAATCCAACGCATAAGGAGAAAATGGCCGTTTACAGC TAATTCTGTTCGTTAAAGTTCGTTTAACATTAAATTGATAAATACTTTTT TTATTATTCTAGATAAGTCGAGAGTCGGAAGTCTATGTCTTCTTTTTCCA TCCATCCAAATAGTTGTCCTTTTCTAAAGCATTTATCTGAGTGTTGGGTT AGTGAGGAATGGGGCCGTCCATTCATTTCATCCAACCATCCCTCGGTTGA AGAAAATTTCGAATTCAAATTGTTTGGTTCGGACCTTTATTTCATACATA AAACTCGATTTTTATTAAGAAACTTTTTCTTTTCCTTGATGCGTATAAGA AGCGTAATACTCAAGTAAAAAAGGGCTATGAAAATTTTTTCTCTACGTAC ATACATTTGCCCCTCCCCCCGTACGCAAGCATACGCTTTTGAGAAGCCCC CCCCCCCCTCCCCCCTTAGTGCGTACCTACTATGTGGATGGCCCTAATGT ATTACCAGAAAAATTGGTCGATATGAAACATACTATTCTTCTTTTTCGTT CAGGAAATATTTACCGTGACTTCCACGAAAGGTCTTCTTTCAACACAGCT TTTCAAACGGTGTGGTTCTTTTCGTACACATGAGTTTGTAAATGCTGACA ATGCTTTTTTGGAGTGCTTTCGAAAATGATCCGTTGCGGTATATATCCAA GACTATTCTGAATGATATGATGGTATGAGGTACGTAATCTTAACGTCATG GACGTAATTTGGACGTCATTTCGATGTATTATACCGACCGGCTTATAATC TTTATCATCCACTTGCTAGGTCGGAATAAGGGAATGAACTTGATATGCTA ATTCACACTCAGCTCACAGACAGAAACTCAAGAAATTATAATTTAACTGT TGTTTTGTTTTCTTTGTTTCATTTTAATAACAAACTTTTAAATACGTATT GCTTAGAAAACTATTTTGGTGCATGGTGATAGATTTTGGAATAACATTTC AAGTGTATACACCACTGACCTTTATATATCCCTGGACCAAGCAATATCTG CCATCATTGATTGAAGTTTTTTTGATTTGGTACCCGAGAAGAAGCCATTG CAATGTTAAAAATCAACGTCTAACGCCGCTACATCATCAAAAGAATTTGA GGAAAAGTAGACCTAGCGCTGTCGATGCATTTACACCACCATCGAGTAGT GCCGCCATTAGGGTACCACTTTTCAAAATACTCCGATCAAAGATTTTGCT TGGCTGGGATTGAGAAGCTTTGTCCAGGGTATATAAAGGTCAGTGTATAC ACAAACTTCTTTTGAAAAAAATTATCAGATTTTGGGCTGTAATATTATTA GAAACTGTCTGAAACCGACAATCTTCATGCTGGGCCTTAAGTGGTTTTTC TAAAAACAGTACCCTTAAAATGAAGAGCTAAAAACATCTGAATTGTCTTT TGACAGCCAAGTTTTTATATTTTGGGTACCATTTTTTTTTCAAAAAGAGG TTTATCTTATCATTTGTCTTCTGTGTTATACTAGCTGGCACACAACGTTG TTTCAACGTTTATCTAACGTTCACAACGTCCATTTAAGTTAGATTAACGT TGAAACAACGTTGTGTGCCAGATATGTTCTACTACGTAGTGAACTTGTAA ATACGATACAATTATGTTAGACAAGGTGCCTTTTTAGGGTATTTACAAAG TGGATTTTTTATGCACAAACAAAGTTATACTCAAAGGTGACACTACAGCA ACGGCTGAAATCACGAAGAAATTTTTCGATGATACTTAATTTTGATGATA CTTTCCATTGGACACAATGTGAAGTTTCTGAAAATTATGCTGAAACAATT TCAGGCGAAAAATGATGATAGAATGATGTCTTTTTTAGTATTTTCGAAGG GACAGTTATAAATGCCGCTTGGTAGTTTCCATCCACTATCATTGGGGTAG TGATTTTTTTGCAACCTTCGTTATTTTATTTTATTCGTATTTTTTGTTAG TGAAAAGGAAAGGATTTTTTATTTTACCCTCGATGGTAGTGGATGAAATA TATCACCATGCATAGTCAGCATATAACACCCTCTTCTCACAGACCCAGTA GAATCTTTTCAGCTAGTGGGGATAAAATTGAAACTCAATGGAGATTGATA TTCCCATATTGTTTATGACTGGGGATTTCAATTCTTTTGTTTTCCACTCA GAAAATTCATTGGATATGAAATAAGCATCATATTCTGCTAAGGATTTGTT TATTTGATTATTTTCAGTGGGGACAAAAATTGGAGGATAATTTTCCACCG GGGACGATATTTTGGACAATTTTTCCAGTTGGTCTTTGAGAAGGGGGTGT CATATAGCAGTACACCATTAGGCATCGAAGTCGATCTATACATATATAAA ACTGCTTACGGATCTTGTAGAAACCCTGCAGAACAATGCAAGATATTTAT TTGAACCATCAACAATATAGTCAATTCGTTTTAAAATTATTCTTCAAACT TTTAACGTCGAAGGAAGCGCTCCAAATTGATGGACTATACAGTATTACTC TCGGGTACCTAATAGCCGGGGGGAGCGCTAATTAATTTTTCGAAAATTTT CCACCCAGGACATTCTTATTCCAACCCTCTTATTAAATTTTGAGATTTTT TCCAACCCCCCCCCCCCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045421XLOC_045421Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073223-exon-scaffold_88-1575043694:346056..346112TCONS_00073223-exon-scaffold_88-1575043694:346056..346112Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1575043694:340732..343539TCONS_00073223-exon-scaffold_88-1575043694:340732..343539Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1575043694:339326..340420TCONS_00073223-exon-scaffold_88-1575043694:339326..340420Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1575043694:337404..337597TCONS_00073223-exon-scaffold_88-1575043694:337404..337597Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1575043694:334445..336559TCONS_00073223-exon-scaffold_88-1575043694:334445..336559Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1510915933:346056..346112TCONS_00073223-exon-scaffold_88-1510915933:346056..346112Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1510915933:340732..343539TCONS_00073223-exon-scaffold_88-1510915933:340732..343539Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1510915933:339326..340420TCONS_00073223-exon-scaffold_88-1510915933:339326..340420Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1510915933:337404..337597TCONS_00073223-exon-scaffold_88-1510915933:337404..337597Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1510915933:334445..336559TCONS_00073223-exon-scaffold_88-1510915933:334445..336559Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1491911889:346056..346112TCONS_00073223-exon-scaffold_88-1491911889:346056..346112Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1491911889:340732..343539TCONS_00073223-exon-scaffold_88-1491911889:340732..343539Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1491911889:339326..340420TCONS_00073223-exon-scaffold_88-1491911889:339326..340420Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1491911889:337404..337597TCONS_00073223-exon-scaffold_88-1491911889:337404..337597Clytia hemisphaericaexon
TCONS_00073223-exon-scaffold_88-1491911889:334445..336559TCONS_00073223-exon-scaffold_88-1491911889:334445..336559Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_88supercontigscaffold_88:334445..346112 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.86715 2.13532 2.16144 0.197986 3.35897 1.38537 7.25839 2.28602 7.81421 15.9756 5.93276 11.7132 5.82896 6.29435 5.89282 6.47343 3.89435 4.21418 1.50963 9.98338 8.48672 9.04477 0.164274 1.23081 0.424949 0.929458 1.984 3.52054 1.84247 0.235028
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073223 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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