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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073215 ID=TCONS_00073215|Name=TCONS_00073215|organism=Clytia hemisphaerica|type=transcript|length=727bp gaaatatttctttaGCTATTTGTAATAAAATATGTCACAGAACTGGATGt aatcaaaatttatcaaaGCTTACGAGGAAAATCAAATGTTTATATataca aaataatatttttacagTTCCGTAGACTCTATAACCACTGTTCTTTGTCC ATCTTGACTGTCGTTATTTATTGGCGCTGTTTGTCTTCTGTAGCAAAAGT TAAGTTTGTAGCATAAGTGatgtttataaaattgtttaatCCTTCTGACT TTCAAAATGTAAGCTAAGGCATTAAGTCCAGAACAAACGAAAAGTGGTAA GTGAATGAATGGTGATATGTAGAATATTGACAAGAAAGAGGAAAGAAGTC CATTATTTACCTCATAAACTATCATTAGAACGCCAAGTACTATATAGTAG AGGCTTAACGGCAAAATACATATGATGTAGATCAACGAAATAGCATTTAA AATTCCAACAGCtgttttgttatgttttctCATTCGAATTTCGGTGTCGA TTTCACTTTTACAAGTACGCGATTgttttgttaaaatctttttagatGAA TGGTTCAAACCAGTAACTGATATTACCATAGCTCCTATTGCAACGCCAGA GAATAACCAGTGTGTGTAGTGAAGTATGTGGGAGGAATATGCGGGGTCGT ATGTAAAAAATGCATATATAGACATTAAAACCATAAAGGCATTCCAACTT ATTGTTATAACATAAATCAATTTATCC Run BLAST on NCBI transcript from alignment at scaffold_88:140680..143477- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073215 ID=TCONS_00073215|Name=TCONS_00073215|organism=Clytia hemisphaerica|type=transcript|length=2798bp|location=Sequence derived from alignment at scaffold_88:140680..143477- (Clytia hemisphaerica) GAAATATTTCTTTAGCTATTTGTAATAAAATATGTCACAGAACTGGATGT
AATCAAAATTTATCAAAGCTTACGAGGAAAATCAAATGTTTATATATACA
AAATAATATTTTTACAGTTCCGTAGACTCTATAACCACTGTTCTTTGTCC
ATCTTGACTGTCGTTATTTATTGGCGCTGTTTGTCTTCTGTAGCAAAAGT
TAAGTTTGTAGCATAAGTGATGTTTATAAAATTGTTTAATCCTTCTGACT
TTCAAAATGTAAGCTAAGGCATTAAGTCCAGAACAAACGAAAAGTGGTAA
GTGAATGAATGGTGATATGTAGAATATTGACAAGAAAGAGGAAAGAAGTC
CATTATTTACCTCATAAACTATCATTAGAACGCCAAGTACTATATAGTAG
AGGCTTAACGGCAAAATACATATGATGTAGATCAACGAAATAGCATTTAA
AATTCCAACAGCTGTTTTGTTATGTTTTCTCATTCGAATTTCGGTGTCGA
TTTCACTTTTACAAGTACGCGATTGTTTTGTTAAAATCTTTTTAGATGAA
TGGTTCAAACCAGTAACTGATATTACCATAGCTCCTATTGCAACGCCAGA
GAATAACCAGTGTGTGTAGTGAAGTATGTGGGAGGAATATGCGGGGTCGT
ATGTAAAAAATGCATATATAGACATTAAAACCATAAAGGCATTCCATATT
ATCATTGTGATGAAAACTGCTTTGCTCGTTACGACATAAAGAGGTTTCCT
TATTGCGAGATTTCTTAACAATGAAATCAATAAAAAGGTGCCTAGTCCTA
CTCCAAACGTGTAGATCGATGTCGCAAAACCAACACTAAAATTAGTACAG
GTCGATGCTGATACAAGCTCAATGATAGCGAAATAAAGCAACAATAGACA
CGTTAAGGCATCCGTTATTGACAAATAAATGTACAGTTTCTGAGGTATTG
TCAATTTCTTGTTGGTTTTTTTCAATCCAACAACTAAAGCAGTGTTTGTG
GCGGTTGAAAAGAGATAAATAAAAGTACACAAAAATAAACGAAAGTAGAA
CATGGTTGGACTTCCGGATTCCACTTGGCCATCAAGTTGAGATGTATTTG
TTGCATTGTTCAAATGTTTCTCAAAATACTCCTCAAAAATACATTCGGGT
TTCATTTTATAATTGTTTTAAATAAATTGCCAATATACTATTACCGATAA
CTACCAGACATCAATTCAACAAAAAGGAAATAGTGCCAACTGACATGTCC
AAAGGCTGTATTTATTTATTTCAGAAAGGGAAAAAAATTACGATAGAATA
AATGTTGACAAAGACTGAATAAAAAAGAAAAAAATTCTGTAGTCTAATCT
TAGAACGGTGGCAATTTAGATGTTTTGAGCGACAAAGCCAACGCCTCAAT
TTTATTTTATTCAAGTAACAAAAAAGTCTAGAAAAAAAGATTTGAGATTG
CAACCTTTCCAGGTCGGAACTTGTTAAATAAGCAAACTGAAATCATCGCC
AAATGACGTCACATACGGAAATTTCTCCTCGGTACTTTCGAATTTTCATT
TGACATATGAAACGTTTTTTGTAGACACTGAAATATAGATCTTTAAAGAT
AACATTTATTTCACCGAAGATTGCTAAACTTTGAGTACACACTTTTTTTT
TATTAGAACACCTAAAATTTGGCTGAGCCTGGATGTGCTTATTTTTTTAG
CAATTTTCAGCCTAAAATGTTCTTAAATGCGTTCTTAATTTTTCAGACTC
CTCTACATAAATCGACAATATCATGCAAAATAAAGAGCAATTAAAATTGG
TAAAATTTGGACAATATTTGACTCTCGATCTTAGAAAATCCATCTCTAAG
TTCAGTTAAAACTGCTTGAAAAGAAGAAAAAATTGTAGTTTCTTGTCATT
TTTTTCCAAACTGAGGCTGGGCATGGCATCTTACGATGTTCTTAATTTTT
CGACGAATTTCAGCCTCAATGTTCTTATAAACTAGGTTCTAATAAAAAAA
AAACGTGTATGAAATTAACCAAAACCTCGTTTTCTTTACTCAGACTAGTT
ACAAAAAGACTAGTATTCATGGCTGGTAAGAATGTTACTAAAAGTAACGA
GAAATTAAGTTAATTGCAATTGTACCGGTCACTAATGTAGCAATGATGTG
CAAAATATAATAAAATGCAAGTTTTGAATAGTTCACAGTTCCGAAGACTG
TATAACCAGTGTTCTTTGTCGATTTTGACTGTCGTTATTTATTGGCGCTG
TTTGTCTTCTGTAGCAAAAGTTAAGTTTGTAGCATAAGTGAAGTTTATAA
AATTGTTTAATCCTTCTGACTTTCAAAATGTAAGCTAACGAATTAAGTCC
AGAACAAACGAAAAGTGGTAGGTGAATGAATGGTGATATGTAAAATATCG
ACAGGAAAGAGGAAAGAAGTCCATTATTTACCTCATAAACTATCATTAGA
ATGCCAAGCACTAAATAGTAGAGGCTTACCGGTAAAATACATATGATGTA
GATCAACGAAATAGCATTTAAAATTCCAACAGCTGTTTTGTTATGTTTTC
TTATTCGAATTTCGGTGTCGATTTCATTGTTACAAGTACGCGATTGTATT
ATTAAATTTTTATTAGATGAAAGGTTCAAAGCAATAATTGAGATAACCAT
ACAACCTATTGAAAGGAAAGCAAATAACCAATATGTGTAGTGAAGCTCGT
GGAAAGAGTACGCAGGGTCATATGTGAAAAATGTGAATAAAGACAGCGAT
ATCATAAAAACATTCCAACTTATTGTTATAACATAAATCAATTTATCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00073215-exon-scaffold_88-1575043694:142788..143477 | TCONS_00073215-exon-scaffold_88-1575043694:142788..143477 | Clytia hemisphaerica | exon |
TCONS_00073215-exon-scaffold_88-1575043694:140680..140716 | TCONS_00073215-exon-scaffold_88-1575043694:140680..140716 | Clytia hemisphaerica | exon |
TCONS_00073215-exon-scaffold_88-1510915933:142788..143477 | TCONS_00073215-exon-scaffold_88-1510915933:142788..143477 | Clytia hemisphaerica | exon |
TCONS_00073215-exon-scaffold_88-1510915933:140680..140716 | TCONS_00073215-exon-scaffold_88-1510915933:140680..140716 | Clytia hemisphaerica | exon |
TCONS_00073215-exon-scaffold_88-1491911889:142788..143477 | TCONS_00073215-exon-scaffold_88-1491911889:142788..143477 | Clytia hemisphaerica | exon |
TCONS_00073215-exon-scaffold_88-1491911889:140680..140716 | TCONS_00073215-exon-scaffold_88-1491911889:140680..140716 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_88 | supercontig | scaffold_88:140680..143477 - |
Blast
The following BLAST results are available for this feature:
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