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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073108 ID=TCONS_00073108|Name=TCONS_00073108|organism=Clytia hemisphaerica|type=transcript|length=1509bp
CACTATGAACATCCATTCCAAATGATCACCGGTGATTATTTCATTATTGC
AAGTCACCACTATATCTAACAATTATCGATAAATATAGCAGTTGGAACTG
CTTGTATCATTTTGGAACCAATAAAGCCACTAGTGCCACTCTAATATCCA
CTTGTTGCATCCTCTTCACTAAACTATGGCGTGCCAGAAAAATTCCGCTC
AGATGGGGAGGACCTCAATTGACTGCAAACAAGTTCCAACAATTTTACCG
GTGTGGAGTCAAACACCGTCTATCATCAGCAAAATACCCTCAGTCTAATG
GCAGAACAGAGCTAGGTGTGAAAGAAGCAAAAAGAATCCTACTGGATAAC
GTATCACCAAATAGCACCATCGACAACAACAAGGTTGCTCGAGCAATCTT
ACAATTATAGAAACACTACTCGACCAGATCTTAAACTCAGTCCTGTCCAA
ATCCTGTTTCGCTGCCAGCTGCATGACCACATACTCACACACCCATCGCA
CTACCAGCTTTACTGGTAGTGATTGACGCAAGACAACAGGAAGAAACATT
CTCCAAACAAAACCACATCATCAGTGAGAAGTATGACTGTCATGCCAAAA
TATTGCAGTCCCTATCTGTTGGAACCAACGTCGTCATCCAAAACCGTAGT
AAGAAACATCAACGTCAATGGATTTGCTCTGGGGTGATCGTAGAAACACT
CCCTAACAGACAATACAGAGTCAGAACCAATGGCTCAGGGAGGATGACAC
TGCAAAATCGTCGCTTCCTTCGACCAGCAACATTTCTATCACCAACAGTA
CTACCCACACAAACCAATCTGCTTCCATCCAGCTTCACCATCAACCTCAC
AATTCATTAGAGACTACTGCCCCTTTAACCACTCCTCATCCAGCAACTCC
TATGCCTGCTCTGCCTCAGCCTCAACACAAGTAACAGATTCCCaattttt
gtctttcttttccagtttgttttttcattctgCTATTAAACTATTGATAC
TGTTGCTTGAGTTTGAGATTGTCTGAAGACTTGCTAGGTCTTCAGTATTt
ggctctaaagctctaaaaagaGCACCTAGTAACATGAAAACCTGTAGGGA
TGTAGGGATCTTCAagagaaatcaaaacaataaaatcaaaacaataaaac
ttAAACTTCCCTTACAATGGAGCAGGTATAGATACACAAAAGATAATTGC
GCAACATGAAAGAGGAAGGTCTAGGCTCTCTGCTGTTACCTTTCGCAACA
TAAAAATTTGACGGATTCTgcgaaaaattttggatttaattCTTTAATTT
ACATTTGCTGGAAGACAATGCACGACCCCACAGAACgaatagttttaaaa
gaaaGCTTGATCTACCATCTTTGAAACACAAAAAAACCATTTGTTACGGG
ACCAATCTGCTCCTTCGTGTTTttaacaaaagtaaccatggttTTTCCAA
ATTTGCGGTGCCGTAATCTTGTTCACAACAAATAGGGCAACCCAAGCTCT
GAAAATCGA Run BLAST on NCBI transcript from alignment at scaffold_86:194929..196437 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073108 ID=TCONS_00073108|Name=TCONS_00073108|organism=Clytia hemisphaerica|type=transcript|length=1509bp|location=Sequence derived from alignment at scaffold_86:194929..196437 (Clytia hemisphaerica)
TCGATTTTCAGAGCTTGGGTTGCCCTATTTGTTGTGAACAAGATTACGGC
ACCGCAAATTTGGAAAaaccatggttacttttgttaaAAACACGAAGGAG
CAGATTGGTCCCGTAACAAATGGTTTTTTTGTGTTTCAAAGATGGTAGAT
CAAGCtttcttttaaaactattcGTTCTGTGGGGTCGTGCATTGTCTTCC
AGCAAATGTAAATTAAAGaattaaatccaaaatttttcgcAGAATCCGTC
AAATTTTTATGTTGCGAAAGGTAACAGCAGAGAGCCTAGACCTTCCTCTT
TCATGTTGCGCAATTATCTTTTGTGTATCTATACCTGCTCCATTGTAAGG
GAAGTTTaagttttattgttttgattttattgttttgatttctctTGAAG
ATCCCTACATCCCTACAGGTTTTCATGTTACTAGGTGCtctttttagagc
tttagagccaAATACTGAAGACCTAGCAAGTCTTCAGACAATCTCAAACT
CAAGCAACAGTATCAATAGTTTAATAGcagaatgaaaaaacaaactggaa
aagaaagacaaaaattGGGAATCTGTTACTTGTGTTGAGGCTGAGGCAGA
GCAGGCATAGGAGTTGCTGGATGAGGAGTGGTTAAAGGGGCAGTAGTCTC
TAATGAATTGTGAGGTTGATGGTGAAGCTGGATGGAAGCAGATTGGTTTG
TGTGGGTAGTACTGTTGGTGATAGAAATGTTGCTGGTCGAAGGAAGCGAC
GATTTTGCAGTGTCATCCTCCCTGAGCCATTGGTTCTGACTCTGTATTGT
CTGTTAGGGAGTGTTTCTACGATCACCCCAGAGCAAATCCATTGACGTTG
ATGTTTCTTACTACGGTTTTGGATGACGACGTTGGTTCCAACAGATAGGG
ACTGCAATATTTTGGCATGACAGTCATACTTCTCACTGATGATGTGGTTT
TGTTTGGAGAATGTTTCTTCCTGTTGTCTTGCGTCAATCACTACCAGTAA
AGCTGGTAGTGCGATGGGTGTGTGAGTATGTGGTCATGCAGCTGGCAGCG
AAACAGGATTTGGACAGGACTGAGTTTAAGATCTGGTCGAGTAGTGTTTC
TATAATTGTAAGATTGCTCGAGCAACCTTGTTGTTGTCGATGGTGCTATT
TGGTGATACGTTATCCAGTAGGATTCTTTTTGCTTCTTTCACACCTAGCT
CTGTTCTGCCATTAGACTGAGGGTATTTTGCTGATGATAGACGGTGTTTG
ACTCCACACCGGTAAAATTGTTGGAACTTGTTTGCAGTCAATTGAGGTCC
TCCCCATCTGAGCGGAATTTTTCTGGCACGCCATAGTTTAGTGAAGAGGA
TGCAACAAGTGGATATTAGAGTGGCACTAGTGGCTTTATTGGTTCCAAAA
TGATACAAGCAGTTCCAACTGCTATATTTATCGATAATTGTTAGATATAG
TGGTGACTTGCAATAATGAAATAATCACCGGTGATCATTTGGAATGGATG
TTCATAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073108-exon-scaffold_86-1491911889:194929..196437 | TCONS_00073108-exon-scaffold_86-1491911889:194929..196437 | Clytia hemisphaerica | exon |
| TCONS_00073108-exon-scaffold_86-1510915933:194929..196437 | TCONS_00073108-exon-scaffold_86-1510915933:194929..196437 | Clytia hemisphaerica | exon |
| TCONS_00073108-exon-scaffold_86-1575043694:194929..196437 | TCONS_00073108-exon-scaffold_86-1575043694:194929..196437 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_86 | supercontig | scaffold_86:194929..196437 . |
Blast
The following BLAST results are available for this feature:
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