TCONS_00073102 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073102
Unique NameTCONS_00073102
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length259

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073102 ID=TCONS_00073102|Name=TCONS_00073102|organism=Clytia hemisphaerica|type=transcript|length=259bp
Nggaaattttggattttggttagcggtgtgatcggccggcccggttcgaa
caaatgtaaacaaacagtcgGGTCTGACTGGTAAATCCCGGGGCAGTTCT
TTCTGTGAATACAGATTGACCCGACTGGAATAATGATTCCAAAACAGGCG
ACAGAAAGTTGATCTATATGTGTGGAAATGTTTTATGCAATTCTTTAGCA
TTTTAGTCTCTTAGCCTCCTATTAGTTAGTACTTTAGTctgtaacttctt
tgcaacaag
Run BLAST on NCBI

transcript from alignment at scaffold_86:134059..134317

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073102 ID=TCONS_00073102|Name=TCONS_00073102|organism=Clytia hemisphaerica|type=transcript|length=259bp|location=Sequence derived from alignment at scaffold_86:134059..134317 (Clytia hemisphaerica)
cttgttgcaaagaagttacagACTAAAGTACTAACTAATAGGAGGCTAAG
AGACTAAAATGCTAAAGAATTGCATAAAACATTTCCACACATATAGATCA
ACTTTCTGTCGCCTGTTTTGGAATCATTATTCCAGTCGGGTCAATCTGTA
TTCACAGAAAGAACTGCCCCGGGATTTACCAGTCAGACCcgactgtttgt
ttacatttgttcgaaccgggccggccgatcacaccgctaaccaaaatcca
aaatttccN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045319XLOC_045319Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073102-exon-scaffold_86-1491911889:134059..134317TCONS_00073102-exon-scaffold_86-1491911889:134059..134317Clytia hemisphaericaexon
TCONS_00073102-exon-scaffold_86-1510915933:134059..134317TCONS_00073102-exon-scaffold_86-1510915933:134059..134317Clytia hemisphaericaexon
TCONS_00073102-exon-scaffold_86-1575043694:134059..134317TCONS_00073102-exon-scaffold_86-1575043694:134059..134317Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:134059..134317 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	5.08946	2.9503	5.93697	9.01508	2.82284	3.49581	8.95998	1.78612	0	8.05267	8.8801	9.54969	3.54147	5.05445	0	3.71859	8.30333	7.44672	6.5198	0	0.764233	2.50928	7.04472	14.3506	2.66138	3.31551	66.1393	39.2596
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073102 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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