TCONS_00073096 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073096
Unique NameTCONS_00073096
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073096 ID=TCONS_00073096|Name=TCONS_00073096|organism=Clytia hemisphaerica|type=transcript|length=155bp
tgagaTTTTTACTACGAGGATGCATCCATGTGCcgtatttcttctttttg
aaaCACGTTGTAACAACTTTCAACTCTTGAATTGCAAGATACGATAACAT
TCGTTTTCCAGAATCATTAACGTGAGATATACCAAAATTACCGAGCGGGC
CTGAA
Run BLAST on NCBI

transcript from alignment at scaffold_86:85026..85180

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073096 ID=TCONS_00073096|Name=TCONS_00073096|organism=Clytia hemisphaerica|type=transcript|length=155bp|location=Sequence derived from alignment at scaffold_86:85026..85180 (Clytia hemisphaerica)
TTCAGGCCCGCTCGGTAATTTTGGTATATCTCACGTTAATGATTCTGGAA
AACGAATGTTATCGTATCTTGCAATTCAAGAGTTGAAAGTTGTTACAACG
TGtttcaaaaagaagaaatacgGCACATGGATGCATCCTCGTAGTAAAAA
tctca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045313XLOC_045313Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073096-exon-scaffold_86-1491911889:85026..85180TCONS_00073096-exon-scaffold_86-1491911889:85026..85180Clytia hemisphaericaexon
TCONS_00073096-exon-scaffold_86-1510915933:85026..85180TCONS_00073096-exon-scaffold_86-1510915933:85026..85180Clytia hemisphaericaexon
TCONS_00073096-exon-scaffold_86-1575043694:85026..85180TCONS_00073096-exon-scaffold_86-1575043694:85026..85180Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:85026..85180 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00073096 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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