TCONS_00073054 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073054
Unique NameTCONS_00073054
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2578

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073054 ID=TCONS_00073054|Name=TCONS_00073054|organism=Clytia hemisphaerica|type=transcript|length=2578bp
GTCGATTTGAGAAATTCTTCATTGAAGTGGAGGGAAGTGAACACGAAAAT
CAAAGATGAAGTTGGTCATTTTAATTGCTGCATTTATTCAACTTTCCTTA
GCTGGAAAAGATCCAATTTTGGGCAAAGATGTGAAACTTAGTCCTCAACA
ATTGCCCGGTAAACTTTACTTCGGAGACATGGAACTGAACAAGAAACAAG
AAGATGCCTTGAAGAAAGGATCCAACATGGCTGGCATGCCAAATGATAAC
TCATATGCTGCAGTGCAAGGAGTCAACTTGAGATGGACAAACGCTGTCAT
CCCTTACGTCATTGACTGCTCACTCGAGAACCTTCCCGATGCAGTCGACT
CCATCAAACGAGCTATGGCTGAATGGGAAGCTAAGACTTGCATCCGTTTT
GTAAAGCACACAAACGAAAAATACAAATTGACATTCTTCAGAGATACCCA
CTGCTGGGGAAACGTCGGTATGGTTTCTTACTCTCGTATCTCAGTCGGTT
ACGGATGTGAATATCAACACGTCATGACTCACGAAATTGGTCACGTTGTT
GGATTTTACCATGAACAAAACCGAAAAGACAGAGATCAATACGTCACAGT
TCACTGGGAAAATATTGGTCAATTCAAGAGTGCTTTCGATATTGTCAAGA
ACACAGACTCCCTTGGTGTCCCATACGATTACGAAAGTATTATGCACTAC
CCATGGAACGCTTTCTCTGCCAATGGCCGAAATACCATGACTCCAAAACA
AGATACACGTGGACAGACCCCATATGTAGCCTTGAGTGACCTCGATGCTA
AGCAAACTTCATTGATGTACAACTGCCCAGCCATCGAAAAACAACGCAAA
GCAGCTGCTGCCAAAAGACACATTGGACAAATCGATGTCAAACCTGGAAG
TGAATGTGTCGATAAAAACCAATATTGTAAAGATTGGGCCAAAGCTGGTC
ATTGTTCAAAATCTTCATACACACGTGAACACTGTAAATTATCATGTGGT
TCACCAACCGCATGTCAAGGATCTGACTGTATCGACAAATACGCAGATTG
TCCAGCATGGAAAGACTGGGGACATTGTCATTTGAACCCCACTGTTGCCA
GGGAATGTCAAGCCAGCTGCAATCCATTCTGCAAAGGGTCTCCACCAACC
CAACCACCAACCCAGCCACCAACTCAACCGCCACAAACCCGCCCACCAGT
TACCAAAGCACCCACACAAAAACCAAACCCAACTGGTCCAACCGAAAAGC
CAAAGCCAAATGGAAAATTCCTAGGAACAGGTATCTTGTGCATCGACACA
CACAACAAGTGTGGCGAATGGGCTCAACAAGGAGAATGCAAAGCCAACCC
TGGATGGATGTTACGTAACTGTATGAAATCTTGCAACGTCAAAACTTGCG
ATAAAGGAATCCAAAAACCTCAAGGACAATGTGCTAATCCCCTTGGTTTG
GCCATGGACGAGCGTGGTCAATACAAAATCCCAGATAGCGCTTTTTCAGC
ACCTACTGGATGGTTGGCTCCAGgaGCTGGATGGGAAGCTTCCGCCTCAA
ACGCCCGTCTCTACATGGGTGACGATTATGATAAAAAACGTATTGGTGCA
TTCTGCTCCGCCTCACACGATGCCGCCAAACAAGCCAATGGATACGTTCA
AGTTGACTTGGGAAAACAAAATACCATCCGATACATCGCTACACAAGGTC
GTGACAAATATTTTGAGagaatcgagaaattcaagatcTCATACAGTAAT
GATGGAAGCAACTTCCAAATGTACCAAGATGGAACCGGACAAGATAAGCT
TTTCGACGGTAATTGTGATCACGTGACACCAGTCTTGAACCAATTCACCA
CGCCCATCAAAGCTCGATACATCCGATACCATCCATGGAACTGGAACTAC
CCATGTCTCCGTATGGAATTGTACGGTTGttaagaaaaattatgaaaaat
tatgaaaaacattgaaacaTAGAATTATTGTAGAAATCAAACGTGAAATA
TAAATCTTATTTTTCTCGAAGTAataccattttttgaattttttttgact
ttgaaagAGATGAATCTCAAAGCACAATGCCCTATACTAGGAAAGATTCA
ATATCTTTAGGGTAGGAAAATCAATAAGCTCACTGGTTCAAAAATGATCC
CTGGTCAATTCTTACCAAACAAAAATACATCAATTTTAATGCACCAGTGA
AACAGCAAGACCACATGGGTACTGATATTAACTTGATGAGGAGTCTCATT
ATATATAGTTGTATTAATTAAACATTCATTAAGCAAGGTGATAAATACAT
ATGTTTCTCAAATTAAATTAactagattttgaaaaagattagGTCGACCC
TGTGTATTTCACATCACTAGGATATCTTGTAACCTTGTAAAAGTCCAATG
CCAGAAAGAAATACAAAGTATTCTTAAAAGTATACCCCCTGTTTAATCCA
AATTAAAGGTCTTTGGTTTTGAATATTGTGTTTAAGTCCCaaggggctag
agaggaatcccCTTCCTCAAACAAGGAAAAGTCCAGCCTCAATATTTGCG
CCGCATTACCATTAGGAATGACGGCTGG
Run BLAST on NCBI

transcript from alignment at scaffold_86:1090236..1102305-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073054 ID=TCONS_00073054|Name=TCONS_00073054|organism=Clytia hemisphaerica|type=transcript|length=12070bp|location=Sequence derived from alignment at scaffold_86:1090236..1102305- (Clytia hemisphaerica)
GTCGATTTGAGAAATTCTTCATTGAAGTGGAGGGAAGTGAACACGAAAAT CAAAGGTAAGATTTTTAAAGCCTTACCTTTAGAATTGGTTTAATCTTTTT GAAAAGGTGCCTCTACCTAACTCGTCTACCTTAAAGGAACAAATTTTTGC GGAATTTAATTTCGCGGTTCACAGGTAAAATTCGGAAGTTTCGCAAAATT TAATATCGCGGTTAAGAGGATATTTTGTATAAAATAAGACCTATTTTTCC CTAAAAAGACCAATTTATAGGTGATTTTCTAAACCATGAGAATATTTCGT GCTTCACTGAATTCAATTTCGCAGATTTCTCGATAAACCACGAAATTAAA TTCCACAAAAATTTATTCCGCGAAAATCCAGTGGGGATGGGTTTGAAGTG CAATTTTTGAATATTGAATGGAACCCACCAAGTCAAGAAATTCATGAAAC AAATCAAGTCAGATTTTGAAGTTACTAATACATTGCTTCTCTGTTCAATT ATAGATGAAGTTGGTCATTTTAATTGCTGCATTTATTCAACTTTCCTTAG CTGGAAAAGATCCAATTTTGGGCAAAGGTAAGCAATCTACTTCCCAAAAA AGAGGTTCTAAAAGTTACAAAGGTTTGACTCAAAATCAAGGTTTAAAAGG CTTTTGAATAATTAAAGGAAGGGCTTAACTTTTGATCAAACGCTTTCTTT TAGAGACATGGCATTTGGTAGAGTACTAAACTAGGGGCTAAACTGTGCTT TCATTTTTTAATGGAGATGAAACAGCAGACTTGCCTTAGTAATATTCTAC AGACAGAAGCTAAATTGATCGAACCCTGTCTTCAACAATCACAGGCTAAG CTTCGGTTTCATAAATTAAAACAATCACACGAAAATTTCAAAATCTATTA TTTTCCTTACAGATGTGAAACTTAGTCCTCAACAATTGCCCGGTAAACTT TACTNCACGAAAATCAAAGGTAAGATTTTTAAAGCCTTACCTTTAGAATT GGTTTAATCTTTTTGAAAAGGTGCCTCTACCTAACTCGTCTACCTTAAAG GAACAAATTTTTGCGGAATTTAATTTCGCGGTTCACAGGTAAAATTCGGA AGTTTCGCAAAATTTAATATCGCGGTTAAGAGGATATTTTGTATAAAATA AGACCTATTCTTCCCTAAAAAGATTAATTAGATCAATTTATAGGTGATTT TCTAAACCATGAGAATATTTCGTGCTTCACGGAATTCAATTTCGCAGATT TCTCGATAAACCACGAAAGTAAATTCCACAAAAATTTATTCCGCGAAAAT CCAGTGGGGATGGGTTTGAAGTGCAATTTTTGAATATTGAATGGAACCCA CCAAGTCAAGAAATTCATGAAACAAATCAAGTCAGATTTTGAAGTTACTA ATACATTGCTTCTCTGTTCAATTATAGATGAAGTTGGTCATTTTAATTGC TGCATTTATTCAACTTTCCTTAGCTGGAAAAGATCCAATTTTGGGCAAAG GTAAGCAATCTACTTCCCAAAAAAGAGGTTCTAAAAGTTACAAAGGTTTG ACTCAAAATCAAGGTTTAAAAGGCTTTTGAATAATTAAAGGAAGGGCTTA ACTTTTGATCAAACGCTTTCTTTTAGAGACATGGCATTTGGTAGAGTACT AAACTAGGGGCTAAACTGTGCTTTCATTTTTTAATGGAGATGAAATAGCA GACTTGCCTTAGTAATATTCTACAGACAGGATAAATTGATCAAACCCTGT CCTCAACAATCACAGGCTAAGCTTCGGTTTCATAAATTAAAACAATCACA CGAAAATTTCAAAATCTATTATTTTCCTTACAGATGTGAAACTTAGTCCT CAACAATTGCCCGGTAAACTTTACTTCGGAGACATGGAACTGAACAAGAA ACAAGAAGATGCCTTGAAGAAAGGATCCAACATGGCTGGCATGCCAAATG ATAACTCATATGCTGCAGTGCAAGGAGTCAACTTGAGATGGACAAACGCT GTCATCCCTTACGTCATTGACTGCTCACTCGGTAAGATAATATTTTAATG TTTCATCTACTTCCTTCAAACCAACTTATTTCCGAAAAGGAGTGTTGAAC CAATGACACTTAATAATTCTTTAATGATTCCCCTTTAAGAAAGTAAAAAG ATTCAAACTTACAGTGTGCATCTTTTCCAGGGTTTTAGCAGGTTTCCCAA TCCACAGTACTTTTGAAAGAATTCCCTCGTTGGTTGTATTAGCCTCCTCA ATGATTACCTGAAGTAGCAAAATACAGATAATTTGACTACCGGGTGTCCC AGAAAAAAATTCCGCTCTTTGAAGTGAATGTTCTCGAATTCTATGAATTT CTAAACAATCAATCCTTTTGCATTGGAAAGAAGGAGGATAAACTTAAATT TTGAGGGGTCATTTATTAAATTTGGTCAACTGGATCAAAAGTTAAGCCAT AATGAATGAAAAATTATTTTTTTGTAATTGCTCAAAAACGTTGAAAATCG ACCTATCGAATTGTGATAGAAGCATGATTGCATGGAGCATGATTTTCATT GTTGAAGTAATAAAAACCTAATAAAAGTATCTTTTTATGAAAAAAGAAGT AAAATTTTAAGTGAAACAAAGAAATTTATCTAAAAATCTGAAAAGTTTGA TAATTCCAACGGATAATTCACTTCAATGGCTACACTGATGAAATCAACGC TACTTTTGACTTTCCGGGTGCATAGGCCAAAACTTGAAGCTAAACTCCAT AGAAAATAATTTGAAATGACCCAAATGAAAATCTTTAGCCCTTTAGAAAT TATTTCAAGCATTTTTTGTTTTCGTGTCCACTTTAAACTCTTTATTCCTG CAAAAAAGTAATAATTAGGTTATAAAATTTGATGGGTCGATTTTCAACTT TTTCGAGCATTTTCAAATAATGAAACTTTTATTCATTTCAGCATAATATT TTATCTAGTTGACCAAATTTGATAAATGACCCCTCATAATTTAAGTTTAT CCTTCCTCTTTCCAATGCAAAAAAGATTGATCATTTAAAAGTTCATAGAA CTCGAGAAAATTCACTTCAAAAAGTGGAACTTTTTTCTGGGACACCCGGT ATTTTATACTGATATATACCAGGATCTACCTAGCTCTACTTAGAGAGTTC ACTTCACCAACGTCAAAAGAACCAACCAGCCAGCGGAGTCCCTGATGGCA CACCAAAATGAAATTCTAATTACGCCAACCCGCCAAAAATATTCTGCCAT CACGTCATTACACCGAAAAAAGTCTCCTATTAATCACGTATAACGCTTTT TGAAATTATTCATCACGCCATCACGCTAAAAAAGGCCGAATAAAACCATT GCGAAAACCGCTTGGAGGTTTCTAAAAGGTAGCAAAAGTACAGCTCAAGA AAAAGGGTTTTGAAAAAGTGAGATTATACTGTAATAGCTGGGCTATATCA CAAGATTCTATCTTTCTTTTTTTTACCAGAGAACCTTCCCGATGCAGTCG ACTCCATCAAACGAGCTATGGCTGAATGGGAAGCTAAGACTTGCATCCGT TTTGTAAAGCACACAAACGAAAAATACAAATTGACATTCTTCAGAGATAC CCAGTAAGTCTTTTTGCTAAACACCCATGTCTTACAGCTCCGGTGGAACT TTTTACCTCAGTATGGCGATAAACCCAATGTGGATAGAAATTCTATTGTT CCAAGGTTAAAAAATCCAGTGGGGATGGTTTTGAAGTGCAATTTTTGAAT ATTGAATGTCGAATGGGGATAAATCAAAGTCAATTTCCAAGTGGGGCTGA AATTTCAGGATATATTCCCACCGGTGACGAAATTTTAAAAAACCCGTCCC AGCGGGTCTGTGACACAGGGGTGTGCTTAAGTCTTCATTTTAGATAATAC ACCTATCAAAAACGAGAAAAGGCGTTAGAGTTTACCAGGGAGACATTACG TTAAAAAGTCCATATCTGCCAGAGCATCAATTCTTAATGACATGACATTC TGCTTCAACTCGTCTTGGTAACCTAAAGATCGCTTTCCTCACGCTAGTGT TTTTGCAGTCAGATGCAGCAACGATAGATGTTGGAGAGTGGGTTAAAAAC CTCCAAAAACTAAAGATTTTGGTANACGCTAGTGTTTTTGCAGTCAGATG CAGCAACGATAGATGTTGGAGAGTGGGTTAAAAACCTCCAAAAACTAAAG GTTTTGGTAGAGACACAGCTCATTTTGAATTCAGGTTACCAACTAAAAGG CAACTTCAACTACTTCGTAGTCTAAGGGTTATATCTAAACTACTAAGGCG TCTTCTTTCAGTACATTGAAACGATTATTCATTTATAGCTGCTGGGGAAA CGTCGGTATGGTTTCTTACTCTCGTATCTCAGTCGGTTACGGATGTGAAT ATCAACACGTCATGACTCACGAAATTGGTCACGTTGTAAGTTTTATTGAG CAGATTTTCTTCGTTGTGCCGACAGACCTTTTTGTTTTCCAGTAACCCAT AGACATAGATTAGTAATATACAACATGGTATCTCTTTCGAAATTATTCGA AGAGCTAGCAGCAAACTTTTTTTTACGTTTTCAATTTCTTATGATTTCAA ATGGGCTATTCCAGAAATAAGTACTTACCCTTACAATACATTTATCAAAA GTCCACCCTTACAGTGCATTTCTGCTATTTTCAAAAACATACCCTTAATC GACGCACACATACCCGTCGGTCAATCTTTCTAACTCCACTCCGTGTTTCA ACGTCAACATTTCTAGTACCGATCAACTCTTATCATCGTTTGATAGATGT TTTTTTTACGTTGCAATAATAGTCTCTCACTGAAAGGGTTAACCCTTTCC GGACGCACGGGCCACTGGGTGGCCCATGAATCGTGTTCCTATATGACGCA GGGGCCACCGGGTGGCCCATAGCTTTGTAAAAGATTTTAACCGTTTTCGC GCCAAAATACAATAACATGGTTTTGAATAATGATTTTGAGATAAATTTCC CGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCCTTTTACT CTATTTCTTTATTCAAAGTCAAAAATTTTGCCTTTCCGAAAAAAAATCTG CCGATTTTTCGGTCACGTGACCAGGTGTCAGCCATATTTAAAATTATTTT TTTGGTTTTTCAAAACCCCTTTTACATGTGAAAAAAACGAGGTATTACTT ATCGTGATATCTTTTATCAATCACTTTCTATTGCAATTTTAGTGAAGCCA GTCAAAAATCAAATTTTTGTTTGCGTCATATAGCCGTGAAATCATGCGTC CGGAAAGGGTTAAGAAAAGACAGGTAATTTCTAATGTTTGTGCTTTGTGC TAGCGTACCACCAGTTAACGTGATAAAGCCTGAGATTCATTGGGTTGAGA TTCCTACTGTAGGCAGGTTTATGAAATACACATGATTTGTTTTCCTCCGT AAACACAGTCTCGAATCTCATTAGTTTTCATAACTGAATGGTTTACTCAG AAATGGTTTTCAACCGTATTGCCTGTAGGCAAATACTAGTTTTCATATTT TCTAGGTTGGATTTTACCATGAACAAAACCGAAAAGACAGAGATCAATAC GTCACAGTTCACTGGGAAAATATTGTAAGTTTTTTTCGAGAAAATGTTTA CCTAACGTCACAATTTCTAGCTACGATCATCTCGAGAGAACTTAATTCTT AGAAAGTCCTAGCAACAGAGCTAAAAAACACAATAATTTCTGTTAGTGAG TGTCCTCTTAAGCAATTTTTGCAAAAGCGACACCATTGCAATCTTTCAAA AGCTTTAAAAAACAATAGCAGTGGCGTCAAATCATCAAAGAAGTACAGTA CAAGCCATGAATGTCTAGTATAACGTTTAGCTGTAAGATAGGGTTTTATT CCAGATAGAAACATAAAAGTTTTCGGAGTTACTCAAAAAAGTAAAAAAAT ATTGTTTGATAGAATGTCCCATTATATTCCATCCATATCTTTAAAGTTCA TTGCAAACGAATTTTTTATCTTGAATTCCAGGGTCAATTCAAGAGTGCTT TCGATATTGTCAAGAACACAGACTCCCTTGGTGTCCCATACGATTACGAA AGTATTATGCACTACCCATGGAACGCTTTCTCTGCCAATGGCCGAAATAC CATGACTCCAAAACAAGATACACGTGGACAGACCCCATATGTAGCCTTGA GTGACCTCGATGCTAAGCAAACTTCATTGATGTACAACTGCCCAGGTGAG ATTTTCAACATTTACTTAATTTAATTATATTGCCTGCTAACGTTAAAGGG TATATTACGTACACGTCATTAAGCTATAATTGGTAAGCTTTTTCTAGACT CTCAATGATACAACATAGAAGTAGAGAATAAACTTGCAGGCCCGGTGGAA GCGGGGAGACTTGAGCCTACCCAACTTTGAGCAAATGACATTTTTTTATC AAATTCCAAGCGAATTTTATCTCATTTTGAGCCTTCAGCCTCCCCACTTT TACGGTTGTTCCACCGGGCCTGACTTGTGTATCAGTAAAGCAATTATCTC GATCGGAGAACCAAACCCATTTTGGGAATTTGCCCTCTTCTGGAAACGAA GTAGTTCATTTTTCTTGACATTTATACATTTGACGCAATCACGCAAATAT ACGTTCCAAAGAGATATTTTTGCCTTCAATTTTCCCGTGGTCAGTATATA CTGTATCAGAAACCTTTGCAGATAAAAATATCTTTTAAGAGAAGTCTGAT ACAGGACCGTTTCTTGATCGAAGTATTTTACTTTACGCTGTACAAAAGTC ACCATAGCAAAATATTTTACCAAAACGCAAAAGAAGACTTGTTACAATCA AAAATTTATTTCGATTCTATTTCAGCCATCGAAAAACAACGCAAAGCAGC TGCTGCCAAAAGACACATTGGACAAATCGATGTCAAACCTGGAAGTGGTA AGCGATTGACAGATTATCTAAAGTGAAATCTATTCATTCACTCAAATCTT CTGTCAAGTCCCAGTTGGCCATTGAAACTGTGACAACCATTGAAAGACTG TATACCATTCTAATAAAATATTTCTAACAATCTAATCCAAGGCCATAAGA GGTCCGAAAAAGAAAGCGCAGAGAAATTTCTGGAATACCTCAATACAAAT TTATCAAACCACAATTTATTTGTGTTGTTTTAGAATGTGTCGATAAAAAC CAATATTGTAAAGATTGGGCCAAAGCTGGTCATTGTTCAAAATCTTCATA CACACGTGAACACTGTAAATTATCATGTGGTTCACCAACCGCATGTCAAG GTAAACATACAATCGAGTTTCAAAATTTCCATGTGCAAATCCTTTTGAAC TAATCATTAGTCCCTTCAAAGAATCTCAAAAACAAAAACCTGAATCTCAC AACCATTTCAATATAAAATTAGACTTTCCGTTGAGGTTTAAAATTAGAGA AACACAAATGCACCATATACATACGCAAACACCACATTGCATTGTTTTCT GACATTGCATCATGGATCAAACAGCTGATTTGTTGCAATTAACGTATTGT CTGATTTTACGTCACTCATAGCCAATCAGCTGTTGGATTTGTGATTTAAT GCCAAAAGTTATTGCAAAGGTGCATATCAAGAATAGATGACGATCAGGGA AATAATTAGAAATAAAGAAATTAATGCTAAAAGAGTACCTTGTGTGCGAT TCACTTTTTAAACCATTTGTTCTCTCTCTCATAGGATCTGACTGTATCGA CAAATACGCAGATTGTCCAGCATGGAAAGACTGGGGACATTGTCATTTGA ACCCCACTGTTGCCAGGGAATGTCAAGCCAGCTGCAATCCATTCTGCAAA GGTAAGCGTTCATACAGGTTCATAAGATAATTCATGATATTCATTACGTA ATGTTATAAACAGAGGTACCTAAAACGACCGAGTGTTTGCAACTGATTTT CACTTTAAACAATAAGACTGGTGGTAAACGTCCGGGCTATTTTGAGTGCT TCCGTATGAAACATTCACGTCTTGAATACCATGAATTTAATTTATAGTCC ATTCACTATCATCTGGATAACCGTTAACGACTTTTAAGTAAAAACTTTTC TTTTCACAATCAAAACAAATAATTTGAAGAACTTTATTCACATGGTAGTG GACTGAATGAAATTATCTGACAGTATCTGTTAGAAATGTGAAGATATTTA TTGTTTGAAGATCAACTTTGGCTAAAAGCAAACTGGCTTCGTTTTGGTGT GATGTGTCTGTATGTAATAGAAATGCCAGTACTAAAACGACTGGAAAAGA AAAGCTTAGAAAACTCTGAATAATCTAAGCAATAACAAATATCATAACGA ATTACCTCGACCCTTTTACAATCATAGGGTCTCCACCAACCCAACCACCA ACCCAGCCACCAACTCAACCGCCACAAACCCGCCCACCAGTTACCAAAGC ACCCACACAAAAACCAAACCCAACTGGTCCAACCGAAAAGCCAAAGCCAA ATGGAAAATTCCTAGGAACAGGTAAAGTTTTTGTCAGAGTAATGCATTTA ACCTTTTAGCGAGTCAACCCTTTTTTAAATGGCCAAAAAGACGAGCTTAA AAAAACTTAAAAAGTTAAATTTGAAGAGACTCATATTCATGATATCCACC ATTGTAATGTCTTCCACGGACTCAACAGCTGATGTGATTGGTTGTAAGTA GCGTATTGACTGATTTTACGTCACTTAAAACCAATCAGGTGCTGGGTCCG TGATGTAATGTCAGAAGACATTGTAATGGTGCATATCATGAATATGTGAG CTCAAGTATCATAAACTGATAAGATTCCTGCAACTTCTTTTACAGAAAGC AATAGACTCTAGAAGCAAAGCTGTTTACCTTTCTCATTCTCATTGGTAAT TTCAGGTATCTTGTGCATCGACACACACAACAAGTGTGGCGAATGGGCTC AACAAGGAGAATGCAAAGCCAACCCTGGATGGATGTTACGTAACTGTATG AAATCTTGCAACGTCAAAACTTGCGATAAAGGAATCCAAAAACCTCAAGG ACAATGTGCTAATCCCCTTGGTTTGGCCATGGACGAGCGTGGTCAATACA AAATCCCAGATAGCGCTTTTTCAGCACCTACTGGATGGTTGGCTCCAGGT TAGTGAATGGGCTTTTCCAGAAAACATTTTTACTCCGCTCACTGTTTGAG AATATTGATTTTTCGAAGTATTGAACCCCCTGGATATCCTCTCTTATAAA GATGCTTACCCCTAGATATCGTATTTTTTAACTTGAAAATACACTTTACC CCCTTACTCCCTTGTAGATATTTAACCCTCTGAATATCCACTTTTGAAAA GAAATCGTTAACCCCCTGGTTATCCGACATCCTCAACAGGGGGCGACACG GAAATTTTCTGGAAAAGGCCAATCTTTCGTTTAGAATATCCAAGAGGCTA TTGACAGTATCTGTTAGAAGTTGCAGCACATTGGCGATATATTCAAGAGG CTTTGGAATGCCTTTAAGCCTGAATGGGAGTATAAGAATATATTAGACGT GATTTTGGTTTAAAAAACCAACTATAGAGACGAAAACAGATCCCTGTAAT TCTTTAATGTAAAATAACAAGCTGATAATTCAATCCTCGTGATTTCACGA GTCAAAGTCAATCAATATCAACAAAAATTCAAACTCGTCAAAAATGATAA CCTTTGCTAATCTCAACAAAAGACTTACCAACATTTTTCAATTTTTCTTT TTTCTAGGAGCTGGATGGGAAGCTTCCGCCTCAAACGCCCGTCTCTACAT GGGTGACGATTATGATAAAAAACGTATTGGTGCATTCTGCTCCGCCTCAC ACGATGCCGCCAAACAAGCCAATGGATACGTTCAAGTTGACTTGGGAAAA CAAAATACCATCCGATACATCGCTACACAAGGTAAGCTTTTTTTGATAAC ACCTTAAACGGTAACAGAAAGAAAACTGGTAAATTCGAGATAAGTCTAAA ATACTAATTCAGTTGACACACTGTTTTTCACAACATCCATGAACGTTAGA TGAACGTTGAATGAAACAGCGTTGTGTGCCAGCTGGATTACAAGGTGTTA TGGGGAGCCAGCATGTAGTACACCCCCTTCTCACAGACCCACTGGATAAA TTGACCAAAATATTGTCTCCGGTTGAAAATTGTCATCCGATTTTCGTCTC ACTGAAAATAACCAAATAAACCAATCCTCGCTACAAAATATTTACTATTT TTCCAGTCCCCAATGAATTTTCTAACTTGAAAACAAAAGAATATCGATCA CCATCCATAAAAAATATGAGAAAACCGATCCCCATCGAGTTTCAGCCCGT TATTTTTATCCCCATTGGCTAAAAAAATCCTACTAGGTCTGTGAGAAGGG TAGTATGACAACATAGTACAGAAGAGCAATCTCCAATATACTAAAATATT TACTTTGATTGATATTGATGGATAGATTAAACTGTTATTGATCAATGTTT CTTCACCACATCCAGGTCGTGACAAATATTTTGAGAGAATCGAGAAATTC AAGATCTCATACAGTAATGATGGAAGCAACTTCCAAATGTACCAAGATGG AACCGGACAAGATAAGGTATGATAGAAATCTTTCAAACTAATCTTGAATA ATCTAAATAAGCTTGAGTTTATCGACCCAGTGATATTTAGAATTTCTAAG TAGCAATGAACTGACCAAACCAGATTCTGAAGTTTATTTCGAGATCAAGT TACCAAGAATAATCATTGTTTTATATCCGCCAAAAACAAAAAGACATATT TCGATAAAATTTCAAATGATTTCTTAATTTCGAAATAAAAGATGGATATG TTTTTCTCTAACCTTTTATCTATATTTTCATCTTCTTTAGCTTTTCGACG GTAATTGTGATCACGTGACACCAGTCTTGAACCAATTCACCACGCCCATC AAAGCTCGATACATCCGATACCATCCATGGAACTGGAACTACCCATGTCT CCGTATGGAATTGTACGGTTGTTAAGAAAAATTATGAAAAATTATGAAAA ACATTGAAACATAGAATTATTGTAGAAATCAAACGTGAAATATAAATCTT ATTTTTCTCGAAGTAATACCATTTTTTGAATTTTTTTTGACTTTGAAAGA GATGAATCTCAAAGCACAATGCCCTATACTAGGAAAGATTCAATATCTTT AGGGTAGGAAAATCAATAAGCTCACTGGTTCAAAAATGATCCCTGGTCAA TTCTTACCAAACAAAAATACATCAATTTTAATGCACCAGTGAAACAGCAA GACCACATGGGTACTGATATTAACTTGATGAGGAGTCTCATTATATATAG TTGTATTAATTAAACATTCATTAAGCAAGGTGATAAATACATATGTTTCT CAAATTAAATTAACTAGATTTTGAAAAAGATTAGGTCGACCCTGTGTATT TCACATCACTAGGATATCTTGTAACCTTGTAAAAGTCCAATGCCAGAAAG AAATACAAAGTATTCTTAAAAGTATACCCCCTGTTTAATCCAAATTAAAG GTCTTTGGTTTTGAATATTGTGTTTAAGTCCCAAGGGGCTAGAGAGGAAT CCCCTTCCTCAAACAAGGAAAAGTCCAGCCTCAATATTTGCGCCGCATTA CCATTAGGAATGACGGCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045295XLOC_045295Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073054-exon-scaffold_86-1575043694:1102251..1102305TCONS_00073054-exon-scaffold_86-1575043694:1102251..1102305Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1100806..1100878TCONS_00073054-exon-scaffold_86-1575043694:1100806..1100878Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1100275..1100472TCONS_00073054-exon-scaffold_86-1575043694:1100275..1100472Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1098703..1098826TCONS_00073054-exon-scaffold_86-1575043694:1098703..1098826Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1097871..1097967TCONS_00073054-exon-scaffold_86-1575043694:1097871..1097967Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1096282..1096350TCONS_00073054-exon-scaffold_86-1575043694:1096282..1096350Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1095661..1095874TCONS_00073054-exon-scaffold_86-1575043694:1095661..1095874Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1094959..1095030TCONS_00073054-exon-scaffold_86-1575043694:1094959..1095030Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1094606..1094722TCONS_00073054-exon-scaffold_86-1575043694:1094606..1094722Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1094055..1094171TCONS_00073054-exon-scaffold_86-1575043694:1094055..1094171Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1093385..1093528TCONS_00073054-exon-scaffold_86-1575043694:1093385..1093528Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1092758..1093000TCONS_00073054-exon-scaffold_86-1575043694:1092758..1093000Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1091975..1092148TCONS_00073054-exon-scaffold_86-1575043694:1091975..1092148Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1091290..1091390TCONS_00073054-exon-scaffold_86-1575043694:1091290..1091390Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1575043694:1090236..1091015TCONS_00073054-exon-scaffold_86-1575043694:1090236..1091015Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1102251..1102305TCONS_00073054-exon-scaffold_86-1510915933:1102251..1102305Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1100806..1100878TCONS_00073054-exon-scaffold_86-1510915933:1100806..1100878Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1100275..1100472TCONS_00073054-exon-scaffold_86-1510915933:1100275..1100472Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1098703..1098826TCONS_00073054-exon-scaffold_86-1510915933:1098703..1098826Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1097871..1097967TCONS_00073054-exon-scaffold_86-1510915933:1097871..1097967Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1096282..1096350TCONS_00073054-exon-scaffold_86-1510915933:1096282..1096350Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1095661..1095874TCONS_00073054-exon-scaffold_86-1510915933:1095661..1095874Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1094959..1095030TCONS_00073054-exon-scaffold_86-1510915933:1094959..1095030Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1094606..1094722TCONS_00073054-exon-scaffold_86-1510915933:1094606..1094722Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1094055..1094171TCONS_00073054-exon-scaffold_86-1510915933:1094055..1094171Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1093385..1093528TCONS_00073054-exon-scaffold_86-1510915933:1093385..1093528Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1092758..1093000TCONS_00073054-exon-scaffold_86-1510915933:1092758..1093000Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1091975..1092148TCONS_00073054-exon-scaffold_86-1510915933:1091975..1092148Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1091290..1091390TCONS_00073054-exon-scaffold_86-1510915933:1091290..1091390Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1510915933:1090236..1091015TCONS_00073054-exon-scaffold_86-1510915933:1090236..1091015Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1102251..1102305TCONS_00073054-exon-scaffold_86-1491911889:1102251..1102305Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1100806..1100878TCONS_00073054-exon-scaffold_86-1491911889:1100806..1100878Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1100275..1100472TCONS_00073054-exon-scaffold_86-1491911889:1100275..1100472Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1098703..1098826TCONS_00073054-exon-scaffold_86-1491911889:1098703..1098826Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1097871..1097967TCONS_00073054-exon-scaffold_86-1491911889:1097871..1097967Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1096282..1096350TCONS_00073054-exon-scaffold_86-1491911889:1096282..1096350Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1095661..1095874TCONS_00073054-exon-scaffold_86-1491911889:1095661..1095874Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1094959..1095030TCONS_00073054-exon-scaffold_86-1491911889:1094959..1095030Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1094606..1094722TCONS_00073054-exon-scaffold_86-1491911889:1094606..1094722Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1094055..1094171TCONS_00073054-exon-scaffold_86-1491911889:1094055..1094171Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1093385..1093528TCONS_00073054-exon-scaffold_86-1491911889:1093385..1093528Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1092758..1093000TCONS_00073054-exon-scaffold_86-1491911889:1092758..1093000Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1091975..1092148TCONS_00073054-exon-scaffold_86-1491911889:1091975..1092148Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1091290..1091390TCONS_00073054-exon-scaffold_86-1491911889:1091290..1091390Clytia hemisphaericaexon
TCONS_00073054-exon-scaffold_86-1491911889:1090236..1091015TCONS_00073054-exon-scaffold_86-1491911889:1090236..1091015Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1090236..1102305 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0019546 0.00526675 0.00191844 0.00188187 0.000846274 0.000569072 0.00748962 0.00222655 0.00189402 0.00137529 0.00396081 0.00618436 2.86377 0.786348 11.844 47.462 12.6293 4.88398 34.2304 32.6813 26.8203 45.7904 52.5839 68.3649 64.4088 70.585 0.00698609 0.00598779 0.018468 0.0875756
Blast
BLAST of TCONS_00073054 vs. Swiss-Prot (Human)
Match: TLL2 (Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.713e-29
Identity = 76/195 (38.97%), Postives = 104/195 (53.33%), Query Frame = 2
Query:  284 WTNAVIPYVIDCSLENLPDAVDSIKRAMAEWEAKTCIRFVKHTNEKYKLTF-FRDTHCWGNVGMVSYS--RISVGYGCEYQHVMTHEIGHVVGFYHEQNRKDRDQYVTVHWENIGQFKSAFDIVK----NTDSLGVPYDYESIMHYPWNAFSAN-GRNTMTPKQDTRGQTPYVA----LSDLDAKQTSLMYNCPA 832
            W   VIPYVI  +      A+   K+AM  WE  TC+ F++ T+E+  + F +R   C   VG        IS+G  C+   ++ HE+GHVVGF+HE  R DRDQ+VT+  ENI Q    ++ +K       SLG  YD++SIMHY  N FS     +T+ P+QD  G  P +     LS  D  Q   +Y CPA
Sbjct:  159 WPGGVIPYVIGGNFTGSQRAI--FKQAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRRGGGPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENI-QPGQEYNFLKMEAGEVSSLGETYDFDSIMHYARNTFSRGVFLDTILPRQDDNGVRPTIGQRVRLSQGDIAQARKLYKCPA 350          
The following BLAST results are available for this feature:
BLAST of TCONS_00073054 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLL27.713e-2938.97Tolloid-like protein 2 OS=Homo sapiens GN=TLL2 PE=... [more]
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