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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073043 ID=TCONS_00073043|Name=TCONS_00073043|organism=Clytia hemisphaerica|type=transcript|length=1710bp
AAACCGCTACAATATCGCGTGTACGGATTCTTAGATAACCAGCTAAACGT
ATACGTATTTTACCACAAAAGTTGCGGAATATTATCTTTCCTCAAATAAA
ACTCTATCATAAATATAATCTACAAGGTTATATAAAATATATGATGACat
caaaagtcactttttaCTACTATGTACATGGTATATAACACGTTAAATCA
AGTTAAAAGATCGTCAACTAACATTGTTCGAACAAGTTCTGCTTTGTAAT
TGGGAAGCCCATCCCTTTGAATCTTGTTAAGTCTTAGAAAGTTTCTCCCT
TAAGTTTAATTGAAAGTCTTAACTGTCATTTACAAGGTTCGTTAATCTAA
AGCAATAAGCCTTCCTTGATAATTCCATCGTAAACCTGTTTTGCGATTAA
TTTTCGGTCGCTCATTTCTTCAAGTTTGTTCGATTTTACTTCCTCGTCTC
CGTTGATTTTGGCGTTCAAATGAGAATCGTTCCTCAGGTCATTACGCTCT
CGAACGCATCCTTCCAACACGGAATGAGGGATGTTATGTTTCTTCATACA
TTGGAGTAATGCGTTAGTATCCTTTGGAAAGCATGCACCACCATAGCTTA
GTTTACCATCATGGCCGGGAACTGCAGTATGCATTGGGTTGATCCATTTA
TTCTTGATCATAAGCTCTTTGACAATATTGAAATTAGCTCCTTGTTTGTT
GCACAGCAAGTACAGCTCATTGAAGAATTGGATTTTGACTGAGTAAAAGG
TATTGACAAAGGACTTCATTGATTCTGATTCCAGTGAACGGCAGATTGAT
ATTTCAGCTTCTTTGAAGTATCGGCGATAGAAATCATGAAGATATTGGAG
TTGATCGTTATTGCAGTTGATTCCTTGTCCAATCACAATATGGTCTTGAT
TCTTGAAATCATCAAAGGCTGTGGCAGCTGATAGAAATTCTGGGTTATGC
ATGATTGACAGCTTTGGGAATCTTCTGGACATTGCATCAGTGGTACCAGG
TTCGACTGTACTTTTGATAACCACAATTCCTTTATATTGATGATTATGAA
GGTTATGCAGTGTATCCACTATGGCAGATTTGTTGTATTCGCGAGCATCA
TGATCGTAAAGTGTCGGCAAACACAAGAAGATGATTGGACATTGCATACA
CTCTTCCAAGGAGCCGATACCACCATCCTTGTATTTGTCGTATTTTCCAA
GAGGGTTGACTCCCATCATTTGGAAACATTTCACCATTGCTCCACCAACG
AAACCACATCCAATTATAGCTGCCATCTTTGGTGAATCTcaagtcaccaa
aatttctgCTGgttatttgaataaaaatttgactGTCGTGTTGATTCTGC
GTTTTCTTGAACACTGGAATCTCCAAGGCTCTGTTGCTTTTTAATATTCT
GGTTgttgaagaaaatcaaaatatccAAGAATCAAAGTCTGCAAATTTGG
ATGACCAAGATATTTGATCAAAGCtgaatttctattattttgcTAAATGT
AGATCACGTTAGCTCACTTCCGTTTATTTCGTTGGCAGGCTTTGATTTGC
TTTGATTCATCCTAAGATGGGACAGTCCAATTTATAGGACTATCAATCCT
TGAGGTTTTGGTAAAATTTCGTAATATcgttttaatttgattttcctTAC
TCCCGTTATTTTTCTGTTAGTATGTAATTGAGGGCTACTCGTTAACCATT
GGAGTTAAAT Run BLAST on NCBI transcript from alignment at scaffold_86:885491..887276- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073043 ID=TCONS_00073043|Name=TCONS_00073043|organism=Clytia hemisphaerica|type=transcript|length=1786bp|location=Sequence derived from alignment at scaffold_86:885491..887276- (Clytia hemisphaerica)
AAACCGCTACAATATCGCGTGTACGGATTCTTAGATAACCAGCTAAACGT
ATACGTATTTTACCACAAAAGTTGCGGAATATTATCTTTCCTCAAATAAA
ACTCTATCATAAATATAATCTACAAGGTTATATAAAATATATGATGACAT
CAAAAGTCACTTTTTACTACTATGTACATGGTATATAACACGTTAAATCA
AGTTAAAAGATCGTCAACTAACATTGTTCGAACAAGTTCTGCTTTGTAAT
TGGGAAGCCCATCCCTTTGAATCTTGTTAAGTCTTAGAAAGTTTCTCCCT
TAAGTTTAATTGAAAGTCTTAACTGTCATTTACAAGGTTCGTTAATCTAA
AGCAATAAGCCTTCCTTGATAATTCCATCGTAAACCTGTTTTGCGATTAA
TTTTCGGTCGCTCATTTCTTCAAGTTTGTTCGATTTTACTTCCTCGTCTC
CGTTGATTTTGGCGTTCAAATGAGAATCGTTCCTCAGGTCATTACGCTCT
CGAACGCATCCTTCCAACACGGAATGAGGGATGTTATGTTTCTTCATACA
TTGGAGTAATGCGTTAGTATCCTTTGGAAAGCATGCACCACCGTAGCTTA
GTTTACCATCATGGCCGGGGACTGCAGTATGCATTGGGTTGATCCATTTA
TTNGAAACATGCACCACCATAGCTTAGTTTACCATCATGGCCGGGAACTG
CAGTATGCATTGGGTTGATCCATTTATTCTTGATCATAAGCTCTTTGACA
ATATTGAAATTAGCTCCTTGTTTGTTGCACAGCAAGTACAGCTCATTGAA
GAATTGGATTTTGACTGAGTAAAAGGTATTGACAAAGGACTTCATTGATT
CTGATTCCAGTGAACGGCAGATTGATATTTCAGCTTCTTTGAAGTATCGG
CGATAGAAATCATGAAGATATTGGAGTTGATCGTTATTGCAGTTGATTCC
TTGTCCAATCACAATATGGTCTTGATTCTTGAAATCATCAAAGGCTGTGG
CAGCTGATAGAAATTCTGGGTTATGCATGATTGACAGCTTTGGGAATCTT
CTGGACATTGCATCAGTGGTACCAGGTTCGACTGTACTTTTGATAACCAC
AATTCCTTTATATTGATGATTATGAAGGTTATGCAGTGTATCCACTATGG
CAGATTTGTTGTATTCGCGAGCATCATGATCGTAAAGTGTCGGCAAACAC
AAGAAGATGATTGGACATTGCATACACTCTTCCAAGGAGCCGATACCACC
ATCCTTGTATTTGTCGTATTTTCCAAGAGGGTTGACTCCCATCATTTGGA
AACATTTCACCATTGCTCCACCAACGAAACCACATCCAATTATAGCTGCC
ATCTTTGGTGAATCTCAAGTCACCAAAATTTCTGCTGGTTATTTGAATAA
AAATTTGACTGTCGTGTTGATTCTGCGTTTTCTTGAACACTGGAATCTCC
AAGGCTCTGTTGCTTTTTAATATTCTGGTTGTTGAAGAAAATCAAAATAT
CCAAGAATCAAAGTCTGCAAATTTGGATGACCAAGATATTTGATCAAAGC
TGAATTTCTATTATTTTGCTAAATGTAGATCACGTTAGCTCACTTCCGTT
TATTTCGTTGGCAGGCTTTGATTTGCTTTGATTCATCCTAAGATGGGACA
GTCCAATTTATAGGACTATCAATCCTTGAGGTTTTGGTAAAATTTCGTAA
TATCGTTTTAATTTGATTTTCCTTACTCCCGTTATTTTTCTGTTAGTATG
TAATTGAGGGCTACTCGTTAACCATTGGAGTTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073043-exon-scaffold_86-1575043694:886695..887276 | TCONS_00073043-exon-scaffold_86-1575043694:886695..887276 | Clytia hemisphaerica | exon |
| TCONS_00073043-exon-scaffold_86-1575043694:885491..886618 | TCONS_00073043-exon-scaffold_86-1575043694:885491..886618 | Clytia hemisphaerica | exon |
| TCONS_00073043-exon-scaffold_86-1510915933:886695..887276 | TCONS_00073043-exon-scaffold_86-1510915933:886695..887276 | Clytia hemisphaerica | exon |
| TCONS_00073043-exon-scaffold_86-1510915933:885491..886618 | TCONS_00073043-exon-scaffold_86-1510915933:885491..886618 | Clytia hemisphaerica | exon |
| TCONS_00073043-exon-scaffold_86-1491911889:886695..887276 | TCONS_00073043-exon-scaffold_86-1491911889:886695..887276 | Clytia hemisphaerica | exon |
| TCONS_00073043-exon-scaffold_86-1491911889:885491..886618 | TCONS_00073043-exon-scaffold_86-1491911889:885491..886618 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_86 | supercontig | scaffold_86:885491..887276 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051287 | NAD binding |
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| GO:0016491 | oxidoreductase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0051287 |
NAD binding |
| molecular_function |
GO:0016491 |
oxidoreductase activity |
| molecular_function |
GO:0016616 |
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
Blast
The following BLAST results are available for this feature:
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