TCONS_00073018 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073018
Unique NameTCONS_00073018
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2461

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073018 ID=TCONS_00073018|Name=TCONS_00073018|organism=Clytia hemisphaerica|type=transcript|length=2461bp
ttccaaaagaaaatttgatagaAACAAGTAGAGTTTAGCAGTATGAAATA
TTGTTCATGTGAAATTTTTTACGTTTAACGTTGGAGaattaaaagtttga
aattaaaattaaaatttgaaaatctcaCTTGTTCAATTTGGAATAGTGGA
GAGCAATAAAAGGTGTGAATAAAAAGCTCAACCATCGGTGAACAGAATGT
AGTTTTTACGAGTCAAAAATTTATGATAATAATTCGAATTGGAATAAATT
AATGAATAAAGATGACGACCACGAAACGGTACTTACGACGTTTCAGTAGC
GTCGATCGTGCGTCCGTTGATCGGGAACAGgTTCTACCGGAGGAGAAAAG
TTGGATGTTAGCTGCTGCCCATGGCAACATCAAGAAGCTCGAAAGTCTCC
TCAAAGAATACCCTTCCCTGGCGAAGAAGAAGGATTTCGTTATGGGTTAC
ACCGCCCTCCATTGGGCCGCCAAACTAGGGCGTACCGATATTGTGAAATT
CATTATGGGTGCAAACGTTGATATTCATTCGAAATCGCATGGTGGTTACA
CGCCCTTACATATTGCTGCCATGAGTGGGCGGGACCAAGTTATAGTACAG
TTGATTGAACTTTATAACGCAAACATTCACACACGTGACCATAGCGGTAA
GAAACCACGGGATGTTGTCAAGGATACCGTAGCTGCTGACGTTCAAAgaA
AACTGGGACGATCACTTATTCTCGACCCGAATACAGTATTAGATTCACGT
ATCGTTGCGCCAACGTTACGACGTAACCTTAATAAACCACAACGTTCACG
GCCGTCAAGTTTTATCAAAACATTATCGGACGGTGAGATGAGCCCAATGG
CCACACCAGAAAGTGTACGGAAAAATATTAAATCCATCGGAGCAAGTGCT
CAAAGATCTATGTcattcttgaaaaagaaaaagaaagacaaaTTACGTGA
CGAACAACTTTCACCACGTTCCCGTCGAAAAACACCGGACGATGAGCACC
CACAAGATGCGCCTTGGAAACAGGAATGGAACGAAAAACAACGGCGCCGT
CCAAAATCCATTGAAATTTCATCGCCAACGGAACTGTTATCACCGTTCCC
GACAGATGACATTGACCACAAATCAcatgttttctaaaaaagataatATA
AAACACGTACTATGGTAATTTAAGCACTGACGTAATACCAAACGAGCAAC
TGTAGCACACTGATATTATAAACAAACATTATTGGATATTGGAGTAACAC
TGAAAACTGGTATCCACTTTGCACGAGTCTAGCACATTTTATGGATAGGA
AAATTCTGTACTTTTGCACCAGGAACCTGGCCTTTGGATTTCAGAACATA
GATATAGACATCGCGTCGAAGTGCATGTGTTGAATTGCATGACAGGAAAT
TATTATAATACCAAAACGTAGGGATAACGTCTTAATGATACTACTATACC
AACATATATATTTTACATGGTTCCTTACATCATTTGACTATTACAAGAAA
AACTCCAATAAAGACTTAATTTAACAGGATCCCCTAAGTTATGTTTTTGT
TATACTGTTTATAATTTGTAGGTGTTGACCAGCCCGACTTTGGACAGAAG
GATTTTTCAGTTTTAGCTTGTTGGAGGTGGAGCTGGAAATaacattttgt
caaatttttgctcttgcactttttttcaaaagcactAGAAccaatttaag
attttaattgaGGTAGGGATGTGCGTGACGTTTATTTGACGATATATTTA
CGTCATCAGCCGCCTTATTATATGAGATTTGTGCCAGCGATTTTGATCAT
AGCAAAACTTCTAGCTCAATGAGCTGACAGTCTTAACTCTAATGACTTTT
CTGCTCCAAATGATTGTTGGGAAGTACAATATACGGTTAGACTGTGATCT
GGCTATTATACTACGACGAGTTACTGACTGCTACGGATAATAATATACTC
ACAATAGTTTTGTTCAGTTGTTCGTAAAAATACGTTCAgacttcaaaatt
tgtaaaaaggaTCTTATAAACCATTCCATGCGTTCGTTGCTGAAAGcagt
tttttaaaagaacacttGATATGGGAAGATTGACGAACTTCATTGAAAGG
AAGCAAAATATATAAGGAGAATCGTTTctagacccccccccctggaatcC
ATTTTCGCCCAACCAGATTAATTTTTCGCAGGTTTGTTTATACGTAGTCA
GAAACTGACAAATTCTTTACGGACGCTCTCTACTTACAAGGTAATATTTT
GCTTTATTTAGTCTAGATAATATATATGAAGTATTTAGAGAAGATTATTT
TAAAAACGGTATCTTAGCTATTATgtattcattcatttattcatttGTAT
ATATCGGTTGACTATGATGTTAATTtatgtaaattttcattttaaaactt
ttagaaatcttttttctaaTGATACTTTTTGCAagaattgaaaatctttt
tcatataaaat
Run BLAST on NCBI

transcript from alignment at scaffold_86:831650..851227-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073018 ID=TCONS_00073018|Name=TCONS_00073018|organism=Clytia hemisphaerica|type=transcript|length=19578bp|location=Sequence derived from alignment at scaffold_86:831650..851227- (Clytia hemisphaerica)
TTCCAAAAGAAAATTTGATAGAAACAAGTAGAGTTTAGCAGTATGAAATA
TTGTTCATGTGAAATTTTTTACGTTTAACGTTGGAGAATTAAAAGTTTGA
AATTAAAATTAAAATTTGAAAATCTCACTTGTTCAATTTGGAATAGTGGA
GAGCAATAAAAGGTGTGAATAAAAAGCTCAACCATCGGTGAACAGAATGT
AGTTTTTACGAGTCAAAAATTTATGATAATAATTCGAATTGGAATAAATT
AATGAATAAAGATGACGACCACGAAACGGTACTTACGACGTTTCAGTAGC
GTCGATCGTGCGTCCGTTGATCGGGAACAGGTGAGTCCTAAAGGAAAAGA
TCTCTCTTTCATCAACGGATTAGAATAGGTGGATTAAGAACTCATAGAAA
ACACTCCTCGTTAGGTTATCAAACTTTTTTACGAGTTTGCTAGCAATTAA
AACTTGATAAGTTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGATCTCTCTTGGGAGCAACGAGAGA
AGTTAATCCACCTATTCTAATCCGTTGCTTTCATGAAAACTGTCTTAAAG
AACAGATTGAGAAAACCCATATTTGTGTATTCGTGTGTGTTGCTTAGCAG
ATCCTGTTGGAGAATAATAGACATTTTGTACATTTCGATGCATTGCTCTT
AAAGGGAAAAAAATGATCCCTCAAATTTTAAATTAATGAATTTACTTAAG
GGTTTAAAACCTTTCAAAAACTTGAAACTGAAGATGAAAAAAATGGGTTT
AAACTAAAATTCATATATTTTTCTGTAATTTTAAACTTTGCCGCATTCAA
ACTTTTTACTACCTTTCCTATGGGACAAAATTTACAATCCTCTTGGAAGG
TTTGCTCTGGGGTTTTCCCGGGGAGGGGTAATTGTTCTTCCTCATGAGCA
CATTTTAATCTCACATCAAGTTTAAGTTTTATCTCTTTTCCTGTTAACAG
ATCGTAAAATTTTAAGTCACTTATAAAAGTCTCAATCTTAATTTTTTTTA
TCAATTTTCAGGTTCTACCGGAGGAGAAAAGTTGGATGTTAGCTGCTGCC
CATGGCAACATCAAGAAGCTCGAAAGTCTCCTCAAAGAATACCCTTCCCT
GGCGAAGAAGAAGGATTTCGTTATGGGTTACACCGCCCTCCATTGGGCCG
CCAAACTAGGGCGTACCGATATTGTGAAATTCATTATGGGTGCAAACGTT
GATATTCATTCGAAATCGCATGGTGGTTACACGCCCTTACATATTGCTGC
CATGAGTGGGCGGGACCAAGTTATAGTACAGTTGATTGAACTTTATAGTA
AGTGTTATTTTACTTTCACTATATGACGTTCGAAATCTGCCCGGGTAGTT
TGATTCTTGGCGTTCGATCGGACGTTTACCTTGTAGCATCAAAATAATCA
CCAATAAATTCCTTCGGTTTGACACTTCTTAGACTATTGTGACCTGTTTC
AACAACTCATCTTTTTTCAAATTCTTTTTTACAGACGCAAACATTCACAC
ACGTGACCATAGCGGTAAGAAACCACGGGATGTTGTCAAGGATACCGTAG
CTGCTGACGTTCAAAGTAAGTCCGCCATTATGGTGTTCATTTCGAATGTC
TCAACAACTTGAAGTAATTCTCTGGTCTTCAGAGGAATACCATAGACTTT
TTTTTTTTGCTTATTTATTTATTTTTCCTTTTCTTTTCTTTTCTTTTACA
TAGTCTAGTACCTCTAGTACCTCTGGCGAAAAAAATCATAGACTATTTTA
TCGCTCTTTTTATCGAACTCATTACAAGTCAACGATATCAGATTCCTTTT
GATCTCCGAGTTATGGATGTTCAATTTAATGAGAGTTCCATTCTTAGACA
AATAAGGTATAAGTTAGGTAAGGAGTCCTTCAGTGGTCCCCATTGAGTTT
CAAGCCGAAGGCTAGAGGTCAATCTCCTTGGTAGGATTTGAAGCCAACAA
ATCCTACCAAAGTTGCGCGGCCTTGAGCGACCCGCCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTTTTTACACAAATGA
CAGATTGAAACTAAAATTTACCGCTTAATTTCGAAAAATATATCACTCGA
AAACAAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGATTCAATCCGTCATCAAAAATACGGCGCATATTTTAAGGCTTCA
ATTTTTCTTGCCTGAGAAAGGTTAGAGATTGACCTCTAGCCCTTCGGGCT
TGAAACACTCAATGGTGGTCCCACATGCGTTCCAGCTTTCGTTTAGTGTC
TAGATGTATGTCGCCTTTTTGGCCCAGCGCTAAGCGAGTGGGCCTTTCAT
TTGCAACGTTCTGTTCGTTCGTGTGTCCGTCCGTTTTGGTAGAAACGGCG
CTTAAAACCAGTATCACACTTTTTGCCGTCTGGATAGGGAAAAGCTTGCT
AAAGTCTGATACTGGCTATAAAAGATATATTTTCTGATTCCGCGCTCCTT
CAAAACAATTTTCAAAACAAACCAAGATGGCGGTCGAAGCGAGGAGGTTG
ATTCATACTTTCTTGAACATTTTCTTTGCTTAGTGGTCAAGAGATTTTCA
AACCAAAGAAATTTTGTAAAGATTTTCTTTATAAACCTTTTTCAACATTC
TTATAGTCTTTGCTCAAGTTTTCATAAATTTTTATGAGTGAAATTCTACC
TTAAATCACTTTCATTTTTTTAGTTTCTTGTATTCAAAAAGACTTTATTT
TTAGGAAATAATGGCTTCTGATATAGAAATAAATAAACTGAAATGCAGCT
CATGTGTAAATTTGAATAAGATTTGAACTTTTTTCTTGATGCTACAGAAG
AAAACAGTCACTTCTGGATCTGTCGATGTTAACAACGGTCAGTACAACAT
ACAGTGGTTGGGACGTGGTATGATTTTCAAACTCAACACATAATTATTTC
AAGTAAACTAATTCTGGAATTTGGTAATGGAAACTAAAATGGAGCTCATG
TGTAAATTGGAACAAGATTGGAACTTTTTCCGAGATGCTACGCGTGCGTG
AAAATTATTTTTTCTGGATCTGTCTCGTTTGGCGAAAGGTGCGGTGGCTT
GATTTTTCAAACTCGACACAGAATTATTTCAAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNCATACATATGCTGCTTTGTACGCTCGAT
TTCAACACGTTACTTTTCGCTGGGCCTTCACGCCCAACGGGCTTCTTGTC
CTATTTTGATAAAAGTGTCGGTTTATATTTTCTTATGAAATTTATGATAA
TTCTTCCTTTTTTTCGTTTTTCAGGAAAACTGGGACGATCACTTATTCTC
GGTATGCGATGATTTTTTCTTTTCCTTTCTTTGCTTTGTTTTTGATCGAT
TGATTGTTAAGTGAGTTATACATTAAAATGCACATTGGGCTTTACCAGAA
ACGAAAGCCGTATGTCAAACATCTTTAATGTAGGTCCGACCTTTTGTGAG
CTACTTCCTTGAATACAACTGAAAAAAAATGCTTAAAGACTTCCCAAAGT
CACCCACGGCACTCGGTGGGAGCAAAAGGTGTGCGTCCAAGGAGGTATAC
GATTTTATTCCTTTAAAGAAGCTCATGATTTGACAGGGAAAATCTATATC
TTAAATAAAGAAGCCTTCAGGAAGCCTTCTTTTATGCACAGAAAGGATGA
TCGAAGTAAACTCCTGTGTCAGAAATTTCCATCTAATTTGTAAAGTCAGA
CTAATAGTCATCTCCTCTAACCACCCTCATCGTTGTTTTGGTGTATGTCT
TTGAATTTATTATTTGATAACGTGACTGAGTAGTTTTTAATGATTTGTAT
TGTAAAAAACTGAGCTTTAATGTTTGAATGGAAATTGAACGAATAAATAA
ATTAGTGAATGGATTAAGTAAAGGGTTTCGACCCAGCGTATTTCAATTCA
AGCTTTATTTGGCTAGGAAGTAGTTTTTTTTTTCATTGCTTGTTACTAAA
TTGATATTTTTACAATTTTTAGCTGTATTTCACTTATTTTATCTTATCTA
GTTTTGTCAATATTTTTAAGCATGACTTTGTAGCTAGAAGTTTTTACAAC
ACGCACACACATACACGCTTTTTGAATAATTACATCACATACATTTCATC
ACATCATAACATAACATTTTAATCAATTATGTCAAGATATCTACCAGAAA
ATCATTACATTAAACCACAGCTATCCTCAAACCCAGCTCCAGTGTTAAAA
AGTAAATTAAAGACACTTTAAATTTTTTGCCAAATTGAAAGAACGACGAG
CCTAAACCATGATTGACGATTTCTCTGTTTGCAGCGAAGACAAAAAAGGC
TGTAACTTTTATAATATAATTGGAATTAAATAGCGGTTTTATTCGAANCT
TTGTACGCTCGATTTCAACACGTTACTTTTCGCTGGGCCTTCACGCCCAA
CGGGCTTCTTGTCCTATTTTGATAAAAGTGTCGGTTTATATTTTCTTATG
AAATTTATGATAATTCTTCCTTTTTTTCGTTTTTCAGGAAAACTGGGACG
ATCACTTATTCTCGGTATGCGATGATTTTTTCTTTTCCTTTCTTTGCTTT
GTTTTTGATCGATTGATTGTTAAGTGAGTTATACATTAAAATGCACATTG
GGCTTTACCAGAAACGAAAGCCGTATGTCAAACATCTTTAATGTAGGTCC
GACCTTTTGTGAGCTACTTCCTTGAATACAACTGAAAAAAAATGCTTAAA
GACTTCCCAAAGTCACCCACGGCACTTGGTGGGAGCAAAAGGTGTGCGTC
CAAGGAGGTATACGATTTTATTCCTTTAAAGAAGCTCATGGTTTGACAGG
GAAAATCTATATCTTAAATAAAGAAGCCTTCAGGAAGCCTTCTTTTATGC
ACAGAAAGGATGCTCGAAGTAAACTCCTGTGTCAGAAATTTCCATCTAAT
TTGTAAAGTCAGACTAATAGTCATCTCCTCTAACCACCCTCATCGTTGTT
TTGGTGTATGTCTTTGAATTTATTATTTGATCACGTGACTGAGTAGTTTT
TAATGATTTGTATTGTAAAAAACTGAGCTTTAATGTTTGAATGGAAATTG
AACGAATAAATAAATTAGTGAATGGATTAAGTAAAGGGTTTCGACCCAGC
GTATTTCAATTCAAGCTTTATTTGGCTAGGAAGTAGTTTTTTTTTTCATT
GCTTGTTACTAAATTGATATTTTTACAATTTTTAGCTGTATTTCACTTAT
TTTATCTTATCTAGTTTTGTCAATATTTTTAAGCATGACTTTGTAGCTAG
AAGTTTTTACAACACGCACACACATACACGCTTTTTGAATAATTACATCA
CATACATTTCATCACATCATAACATAACATTTTAATCAATTATGTCAAGA
TATCTACCAGAAAATCATTACATTAAACCACAGCTATCCTCAAACCCAGC
TCCAGTGTTAAAAAGTAAATTAAAGACACTTTAAATTTTTTGCCAAATTG
AAAGAACGACGAGCCTATACCATGATTGACGATTTCTCTGTTTGCAGCGA
AGACAAAAAAGGCTGTAACTTTTATAATATAATTGGAATTAAATAGCGGT
TTTATTCGAATTCTATCAAAAGTTAATACACTCTTCTCGAGATGCATAAA
TTTATTGTTGTCCTCGTTTTCAAACAGATTTCATTGCTATGAAATTATAC
ATTTAAACCAATTTAAATTCACAAAAGGCAAACATTAACTCTAAAACAAA
AGTACTGGAAATTCAAAATGTCTCATGAGGTGTAAACAGCACAATTATCA
TTGAGAATATGTAATTTTATAGCAATGAAATCTGTTTGAAAACGAGAACA
ACAATAAATTTATGCATCTCGAGAAGAGTGTATTGAAGCCTCTTTTGACT
ACCCTAAAAATTCTATTGAGACAGACGTTTTCTTTTGGATATCTTGTCAA
TTAATGTTTACACACACACACACATACCATTACATCTTAACACATTGGGC
TTTTCCAGAAAAAAAACGTGCACCCCCTGTTGAGGAGGTCCAACCTTTTG
TGACCTACCCCCATGGAATTCCGCTTATTTTTGACGGATTTTCGTGTACC
CTTATGGAATTCCACTGCATTTCAAACCTTACGCCCTTGGAACGAAAATG
GACCTCCTCAACAGGGGGTGCACGGTTTCTTTCTGGAAAAACCCATTCAT
AACTCACAATAACCATCACTAATTCACTAATCATTAATTAAAGAAACACA
CGGAGTTTACTGCACTGACATTTTTTCTATGCATGATAGAAACCCCCCCC
CCCCCCCCCGACACCCTTTTATGCCCCTTTTACAACGCACGATAGCCCCT
CATCCCCTTGAACAGAAGCCTTCTAATATACAGTGGATTGAAATATTTGT
CTTAAAATCTGACTGGTTCAAAACCATTTCGCGACTCTCAGAGTTTCATA
GATCGCGCACTTTACATGTATCATATGCTTAAAGGGGGATTTCCATTTTA
TTTATCTCATGGCTTCAAGAACTCACTTCCAGTAATGGGCGTGATAAGCT
TTTGCCTTACCAGAAGATTCTAACATCTAACATTCTTTTTAAAGAGGAAA
TGGTTTTATCCTCTTTAAAGTAAAATAAACCAGCCGAGGCTGGAAGGTCA
GCCAATAGAGATTAGCTAGATAGCTTTAATAAGTGGGTTAACAGATGTAA
GAGATGCACTGAAACAGAGTAGACTAAATATGTTGAATAATGTACAAAAT
GTGAAACATTTGATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CCAATAGCTGATTGGCTGTAAGTGACGTAAAATCAGTCAATACGTCACTT
TCAACCAATCAGCTGTTGGGTCCGTGGAAGACATTGCAATGTTGCATATG
GTGAATTCATGAATTCGACGAAAGTTTTCTAAATTTTGATTGATCCACTG
TATATTGAAAATTAGTGTTCCTTTCAAATCACGTTGTCCTCTCTTATATA
CATGTAATATTTCCCTACAAACTTGTACACAGAGCCGGATTGGATGCTAA
AAGACGCCTCAGTAGTACGGAAATCATCCGCCCAGCTAACCCATATCACT
CTACCGTCGCCAAAATCGGGTGATAGACGCCTTGGGCGGAACTTCCGCCC
TTCTATTAGCACGTAACAAAGAATGTGTTTTCCGACCACTGGAAGAGGTG
TATCAATCGCGTATCGAATGGAGATGGTTTTTTTGGGCGATCGACTTTGA
GTTTAAAATGCAGACAACTGAATTTGTTCCTTCGTGTGGGTTAGACTTTT
CAAGTTTTTCTGGTTTTGAAAGAACCCAGAGTTGCTTATTCCTGAGACTC
GTCAATACCGTAACTTAGTCTAATGTCCGACACCCTTCTTTAGAGAAAGG
AATAGTAGAAAGGTCGGAAACTATATTTTTTACTAAGCGACCAGAGAGAA
AAAATCTTTTGTCTATCAGTGATTCTGACCTTACTATTATTCCTATCTCT
AAAACTGGGTGTTGGAATTAGAAGANTAAGTGACAAAAATTGAAGCTTGC
AACAGATTTACACTGGAAATACTTTGGTACAACACTGACTTATCACATCT
GACTATCGCTTGAGCCGCCATCTTGAAANTGAAGTAGAGAGCCGCATGCT
AATGGAGAGTAAACCGAAAACACCAGTTTATCCACGGTTTCTCAATTTTA
AAATTCGGTTCAGTCCACACGAATTCCCTTTCAACAAGACGTATAGCTGC
TTCTTAACAGAAAAATATTTTCGACTGACCGGCCGAACGACTCCCACTTT
TNAAAGTTAACCCGATCGGAAGAAAGTTTAGAAATAAAAGTGAGATCGGA
AAATCGGATTTTTTTTTTGTCGTCTTATGGAACTGAATTTCACCTATTTG
AATGCTCAGCTTAGGCTGACCAAATATTGCATGTCTGATTTCTTGACAAT
TCATGATATGTACCATTGCAATGTCTTCACGGAACCAATAGCTGATTGGC
TGTAAGTGACGTAAAATCAGTCAATACGTCACTTTCAACCAATCAGCTGT
TGGGTCCGTGGAAGACATTGCAATGTTGCATATGGTGAATTCATGAATTC
GACGAAAGTTTTCTAAATTTTGATTGATCCACTGTATATTGAAAATTAGT
GTTCCTTTCAAATCACGTTGTCCTCTCTTATATACATGTAATATTTCCCT
ACAAACTTGTACACAGAGCCGGATTGGATGCTAAAAGACGCCTCAGTAGT
ACGGAAATCATCCGCCCAGCTAACCCATATCACTCTACCGTCGCCAAAAT
CGGGTGATAGACGCCTTGGGCGGAACTTCCGCCCTTCTATTAGCACGTAA
CAAAGAATGTGTTTTCCGACCACTGGAAGAGGTGTATCAATCGCGTATCG
AATGGAGATGGTTTTTTTGGGCGATCGACTTTGAGTTTAAAATGCAGACA
ACTGAATTTGTTCCTTCGTGTGGGTTAGACTTTTCAAGTTTTTCTGGTTT
TGAAAGAACCCAGAGTTGCTTATTCCTGAGACTCGTCAATACCGTAACTT
AGTCTAATGTCCGACACCCTTCTTTAGAGAAAGGAATAGTAGAAAGGTCG
GAAACTATATTTTTTACTAAGCGACCAGAGAGAAAAAATCTTTTGTCTAT
CAGTGATTCTGACCTTACTATTATTCCTATCTCTAAAACTGGGTGTTGGA
ATTAGAAGAGACAACTTACGGTAGTATATTCTTGAACGTTGAAACGCAGA
AAAGTTTTAATTCTTTAAAAAGCATTTTTTTATTAAGTAGTTTGATTTTA
ACAAAAATTCTTAACCAAAATTTTACTTTTATCAAATTTAGTTATATATT
TATAGAGTCTAAATTTTTAGACCCAAAATTTCTGTATCTTTTATTTAAAT
TTTTTGATATAGTGTATCGATAGTTTTCTTTTTCTTTACGACGTTTTGTT
ACTTTTTGGCATTTTACTGCTAATATGTTTTGCGTGATACCTGTTACAAT
CAAACTATTAACAAAGTCGGTGATGTACATTTTGATTTTGAATTAAACTC
ATCCGCTATTTCGCCCTCTTTTACTCGATTTCCAAAATTTGGTATAGGTA
AACATTAATTTGTTTTTTAAGAATACATTAGATTTTAATTTTTTTAATTT
TTACAAAATTCTTCTAACATTTTCTGTCATATTATTTATATATTTACATT
CATTTATGATCAGTTTTTTGTTTTCGTGAGTCAAGTGATCCAATAATGGC
AGTCCTAATACACAGCTATCTTAAAACACTGGGTTGAACTTCTTCGCCTG
GTGAAGCAAAATGATGCAGCAATCTGCAGCCAGAGAAAGATACGAATCTC
TCTCTAGTGTTTGTAAGATATTTTTGGTCAAATTCCAAACTATAAAGATT
AAGAATCAATCTAGATCGATTAATCTGCAGATACTAAAAGTTTGTATATC
AAAGTTTGATTTTTGGTCTATTTTTTATACTCTGACAAGGCAAAATTTCA
AAACACCGAACCAAATTTTCACCCGAATGAGTAAATTTTGATTAAATTTT
ATTATCGTGATATATTCGCCTGTTTATAATATTGTCACAAATGATATTTT
AGTATATTTCTTCAAAATGAAAATTGGAGAAAAAATGAAGCCATACTCCA
TACCTTGTGTTTGATTCAAATTTGAAATCTTTGACATGGTTCTAGGGATG
AGTAAAATCTCGTGACTTTTCTCAACCCTCAATTTGGGCTTGAATTTGAC
ACTGTCTGTCCATCTTTCTGTCTGTATGTCTGTCTATCTAAAAATCTCTT
GGACAACCTAGAGTTTCTGAAACTTTCTCCTTTTCATTTTTTGAAAATTT
TGAACTTTTCGTTTATCTTTATATTGGGTCTTTCGAATTATACAGTTGCT
GCTCTTTAATTCGATTTTCAAGGGAAATAGGATTTTCGTCGAATAGTAGA
GCGTCTTTTATGGGGGTTTCTTGTTGACGGTGACTTAATTATCGAATAAT
GGAGGGTATCGAATACTAGAAGGTCGAATTGGAGAGCGTCAACTGTACTT
ACGTTTATCCGAGTCCATTTGGCAAATTTTCTTACAAAAATATTTCTTAT
GACATATCATAACTCATTTTTTCAGACCCGAATACAGTATTAGATTCACG
TATCGTTGCGCCAACGTTACGACGTAACCTTAATAAACCACAACGTTCAC
GGCCGTCAAGTTTTATCAAAACATTATCGGACGGTGAGATGAGCCCAATG
GCCACACCAGAAAGTGTACGGAAAAATATTAAATCCATCGGAGCAAGTGC
TCAAAGATCTGTGAGTTGTTTTTTTCTTCTGTTTTGTTCTGAAATACCCG
CCAGAGTTTTTTCGCGAGCCTTATGCTAATAAATAAATTTCATTTTAAAG
GTTACGCCATGGCGAAATATAATTTGAAATCAAAAATCAAATCGATTAAC
TCTTTTTCTGGATTTGAAATCACAGTAGATCATATTTTAATTTGAGACTG
GAAATATTATTAACTTAAAAAGGGAAGTGCTTAAGTTGCGTCCGACTTTC
TGCCCTGCCTTTTCATTCTAATTGTTAGAGTAGGCACAAAGCTGCTTGAA
AATTGGCAGCTAAAATCTTTGCTCGAAAAAAGATTGTAAGAAGATTTTTA
TAAAATGTTTCAAGATTTTCGATGATGCAAAGTCAAAACTGAAAATTCAG
AAATTCTCAAAATGACAATTTTGATTTAACAACGTCTTAAAAGTTTCTGA
AAACCGATCTCTTTTGAAAATAGTTCCATTCATGTATGGAATATGCTGTG
AAAATTTTAGAAAAACAGCTTAACTGAAACTGAAAATATTAAGCTTTAAA
GATATTTTTGTATTTTTCTCCTATATTTTGCAAAAAAATGACAGAATTTG
CTGGTTTTGCTGATGCAGAGAAGATTTTTATATATAATGTAAATTTTTTG
TTATTAACTATTGACCCAAGCTGATAGAAATGGAATTCCAAGATTTTTTG
CTGTTTCTCATATTTAGAACTTTCTGTTTTATCAATGCTGATTCTAGGGC
CCCAAAATACTGGTTGACCTTTAAGATGTTATATCTTTTACCCATCTTCT
AAAGTCACAGATGTATCTGCATTTTCTTAGGTGTAGAAAGTTTTCCCATT
TTCATAACCTATTTTCACTATCCAAGGAACTAGAGTGAGTTATATGCAAT
TTTTATCTAATTTTGTGTTGAAATATTCCCTTCAAACGCAAAATGTTATT
TTGAATCTGTCTCAAACCATAAAAAAATGCTCATTTTTAAGTATGACCAT
CATTCTTTCCAAATAAACAAAAAACGTCTAATTCTGATAAATCTACAGGT
CAGAGTCCTCATTTTAATGACGACCTACGTTTTGGGGGCCGTCTCCGTTT
TGGGGGCCGTCTCCGTTTTGGGGGCCATATACTATATTGCATTGTCTTTA
AACATTGAAATTTCTGCCTATCTTAGAAACGTGCAATATCTAATCTGTCT
GACTTCCTAATTTCAGATGTCATTCTTGAAAAAGAAAAAGAAAGACAAGT
GAGTACCCATTTAATTCTTCTTCCATAATTTCTCTGATTTTGGTCGTGTA
TTTTCTACTGGCCACTCCCAGTACACTCGGTCGAGTTTTAACATTCACAT
TACAGTCTCTTTAACTCGAACAATTTTTCCGTTCCCTTCAGTAGTTAACA
ATGCCTAAAGCTTACTCCATAACTTGAAATTTTGATAAATCGAACAAATT
TGTATTCCGCGTGCGTGTTCGAGTTATTGAGACTCCATTGTATTTATAAC
ATTTGATTTACACTTTACTAAATAACATCTTTGCAAAATATATTGATATT
TGATCGACGTTACTGTTGAGATACTGTACGTTGTGCGACCGTAGTACAGT
GGTAGAGCATCCAGCTACGGTTCGCAAGGTCATTTGTTACCTACATTTTT
TTTTTCATTTTCACAGATTACGTGACGAACAACTTTCACCACGTTCCCGT
CGAAAAACACCGGACGATGAGCACCCACAAGATGCGCCTTGGAAACAGGA
ATGGAACGAAAAACAACGGCGCCGTCCAAAATCCATTGAAATTTCATCGC
CAACGGAAGTAAGTTCGACCACCACGACTCCAACCAAAGAGAGCGGTGGC
AAGCCGCCTACCATCAGGTCTAACTTAACACCAACACGCTACCAAAACAT
TGCACAGCAACCAGTGCCACCGCCACAGAACGAACAACTAGGTCAATCTA
CAATGTCTTTTTTTCTTTAAACTCTTTTGAGATGTTTCTTCCCAATCATT
CATTATACATATTATGATACATGCATAACATCATCTTATGTCATAATTTA
CCATGCTACTTTTATCAAGTAATATGAACAATTACTGTGGATAAGCTGCC
AGTTTGAAGGTTTGAAGTTATACTTTGTTCAAGCCTTTCTTCAATTACAA
TTGGTCTTACATTCGTTCAGTTGGTATTTGGAAATGCATGCTACATCTTT
CATATTACATACTGCACTACATCAATATCAATATGCACTCGTATAATATT
ATACAGTAATATGAGTATTACACGTTTTGCTCTTACCCCGAAATTGGGGA
CAATAATAGGATGTTTTTAGACAGTATGTTCTCTATGATGAACATTGATT
TTCGCATTTTGGAAAGTTTCTAAGAAGGGGAGAATATTGGGGACGACAGT
TTATTTTGAAGATTTTAAATGAAGGTTTTTACGAATTCTTGCATTTATAT
ATTACAATACGTATTTTAGTATATTTTTAATTGCAATATTTTTTATGTAG
CTGTTATCACCGTTCCCGACAGATGACATTGACCACAAATCACATGTTTT
CTAAAAAAGATAATATAAAACACGTACTATGGTAATTTAAGCACTGACGT
AATACCAAACGAGCAACTGTAGCACACTGATATTATAAACAAACATTATT
GGATATTGGAGTAACACTGAAAACTGGTATCCACTTTGCACGAGTCTAGC
ACATTTTATGGATAGGAAAATTCTGTACTTTTGCACCAGGAACCTGGCCT
TTGGATTTCAGAACATAGATATAGACATCGCGTCGAAGTGCATGTGTTGA
ATTGCATGACAGGAAATTATTATAATACCAAAACGTAGGGATAACGTCTT
AATGATACTACTATACCAACATATATATTTTACATGGTTCCTTACATCAT
TTGACTATTACAAGAAAAACTCCAATAAAGACTTAATTTAACAGGATCCC
CTAAGTTATGTTTTTGTTATACTGTTTATAATTTGTAGGTGTTGACCAGC
CCGACTTTGGACAGAAGGATTTTTCAGTTTTAGCTTGTTGGAGGTGGAGC
TGGAAATAACATTTTGTCAAATTTTTGCTCTTGCACTTTTTTTCAAAAGC
ACTAGAACCAATTTAAGATTTTAATTGAGGTAGGGATGTGCGTGACGTTT
ATTTGACGATATATTTACGTCATCAGCCGCCTTATTATATGAGATTTGTG
CCAGCGATTTTGATCATAGCAAAACTTCTAGCTCAATGAGCTGACAGTCT
TAACTCTAATGACTTTTCTGCTCCAAATGATTGTTGGGAAGTACAATATA
CGGTTAGACTGTGATCTGGCTATTATACTACGACGAGTTACTGACTGCTA
CGGATAATAATATACTCACAATAGTTTTGTTCAGTTGTTCGTAAAAATAC
GTTCAGACTTCAAAATTTGTAAAAAGGATCTTATAAACCATTCCATGCGT
TCGTTGCTGAAAGCAGTTTTTTAAAAGAACACTTGATATGGGAAGATTGA
CGAACTTCATTGAAAGGAAGCAAAATATATAAGGAGAATCGTTTCTAGAC
CCCCCCCCCTGGAATCCATTTTCGCCCAACCAGATTAATTTTTCGCAGGT
TTGTTTATACGTAGTCAGAAACTGACAAATTCTTTACGGACGCTCTCTAC
TTACAAGGTAATATTTTGCTTTATTTAGTCTAGATAATATATATGAAGTA
TTTAGAGAAGATTATTTTAAAAACGGTATCTTAGCTATTATGTATTCATT
CATTTATTCATTTGTATATATCGGTTGACTATGATGTTAATTTATGTAAA
TTTTCATTTTAAAACTTTTAGAAATCTTTTTTCTAATGATACTTTTTGCA
AGAATTGAAAATCTTTTTCATATAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073018-exon-scaffold_86-1575043694:850898..851227TCONS_00073018-exon-scaffold_86-1575043694:850898..851227Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1575043694:849331..849616TCONS_00073018-exon-scaffold_86-1575043694:849331..849616Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1575043694:849063..849143TCONS_00073018-exon-scaffold_86-1575043694:849063..849143Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1575043694:844714..844740TCONS_00073018-exon-scaffold_86-1575043694:844714..844740Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1575043694:835518..835702TCONS_00073018-exon-scaffold_86-1575043694:835518..835702Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1575043694:834280..834311TCONS_00073018-exon-scaffold_86-1575043694:834280..834311Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1575043694:833720..833861TCONS_00073018-exon-scaffold_86-1575043694:833720..833861Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1575043694:831650..833027TCONS_00073018-exon-scaffold_86-1575043694:831650..833027Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1510915933:850898..851227TCONS_00073018-exon-scaffold_86-1510915933:850898..851227Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1510915933:849331..849616TCONS_00073018-exon-scaffold_86-1510915933:849331..849616Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1510915933:849063..849143TCONS_00073018-exon-scaffold_86-1510915933:849063..849143Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1510915933:844714..844740TCONS_00073018-exon-scaffold_86-1510915933:844714..844740Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1510915933:835518..835702TCONS_00073018-exon-scaffold_86-1510915933:835518..835702Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1510915933:834280..834311TCONS_00073018-exon-scaffold_86-1510915933:834280..834311Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1510915933:833720..833861TCONS_00073018-exon-scaffold_86-1510915933:833720..833861Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1510915933:831650..833027TCONS_00073018-exon-scaffold_86-1510915933:831650..833027Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1491911889:850898..851227TCONS_00073018-exon-scaffold_86-1491911889:850898..851227Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1491911889:849331..849616TCONS_00073018-exon-scaffold_86-1491911889:849331..849616Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1491911889:849063..849143TCONS_00073018-exon-scaffold_86-1491911889:849063..849143Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1491911889:844714..844740TCONS_00073018-exon-scaffold_86-1491911889:844714..844740Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1491911889:835518..835702TCONS_00073018-exon-scaffold_86-1491911889:835518..835702Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1491911889:834280..834311TCONS_00073018-exon-scaffold_86-1491911889:834280..834311Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1491911889:833720..833861TCONS_00073018-exon-scaffold_86-1491911889:833720..833861Clytia hemisphaericaexon
TCONS_00073018-exon-scaffold_86-1491911889:831650..833027TCONS_00073018-exon-scaffold_86-1491911889:831650..833027Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:831650..851227 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.126599	5.42883e-05	0.00236655	0.197561	0	0	0	0.267156	0	4.07991e-10	0	2.73843e-10	0.516857	0	0.656703	3.54951	0.317281	0.703705	2.20605	0.140367	0.05034	0	0	0.0233304	0.703525
Blast
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BLAST of TCONS_00073018 vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.455e-23
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 1 
Query:  337 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 708
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395
The following BLAST results are available for this feature:
BLAST of TCONS_00073018 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC1.455e-2340.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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