TCONS_00073016 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073016
Unique NameTCONS_00073016
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2414

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073016 ID=TCONS_00073016|Name=TCONS_00073016|organism=Clytia hemisphaerica|type=transcript|length=2414bp
ATATTGTTCATGTGAAATTTTTTACGTTTAACGTTGGAGaattaaaagtt
tgaaattaaaattaaaatttgaaaatctcaCTTGTTCAATTTGGAATAGT
GGAGAGCAATAAAAGGTGTGAATAAAAAGCTCAACCATCGGTGAACAGAA
TGTAGTTTTTACGAGTCAAAAATTTATGATAATAATTCGAATTGGAATAA
ATTAATGAATAAAGATGACGACCACGAAACGGTACTTACGACGTTTCAGT
AGCGTCGATCGTGCGTCCGTTGATCGGGAACAGgTTCTACCGGAGGAGAA
AAGTTGGATGTTAGCTGCTGCCCATGGCAACATCAAGAAGCTCGAAAGTC
TCCTCAAAGAATACCCTTCCCTGGCGAAGAAGAAGGATTTCGTTATGGGT
TACACCGCCCTCCATTGGGCCGCCAAACTAGGGCGTACCGATATTGTGAA
ATTCATTATGGGTGCAAACGTTGATATTCATTCGAAATCGCATGGTGGTT
ACACGCCCTTACATATTGCTGCCATGAGTGGGCGGGACCAAGTTATAGTA
CAGTTGATTGAACTTTATAACGCAAACATTCACACACGTGACCATAGCGG
TAAGAAACCACGGGATGTTGTCAAGGATACCGTAGCTGCTGACGTTCAAA
gaAAACTGGGACGATCACTTATTCTCGACCCGAATACAGTATTAGATTCA
CGTATCGTTGCGCCAACGTTACGACGTAACCTTAATAAACCACAACGTTC
ACGGCCGTCAAGTTTTATCAAAACATTATCGGACGGTGAGATGAGCCCAA
TGGCCACACCAGAAAGTGTACGGAAAAATATTAAATCCATCGGAGCAAGT
GCTCAAAGATCTATGTcattcttgaaaaagaaaaagaaagacaaaTTACG
TGACGAACAACTTTCACCACGTTCCCGTCGAAAAACACCGGACGATGAGC
ACCCACAAGATGCGCCTTGGAAACAGGAATGGAACGAAAAACAACGGCGC
CGTCCAAAATCCATTGAAATTTCATCGCCAACGGAACTGTTATCACCGTT
CCCGACAGATGACATTGACCACAAATCAcatgttttctaaaaaagataat
ATAAAACACGTACTATGGTAATTTAAGCACTGACGTAATACCAAACGAGC
AACTGTAGCACACTGATATTATAAACAAACATTATTGGATATTGGAGTAA
CACTGAAAACTGGTATCCACTTTGCACGAGTCTAGCACATTTTATGGATA
GGAAAATTCTGTACTTTTGCACCAGGAACCTGGCCTTTGGATTTCAGAAC
ATAGATATAGACATCGCGTCGAAGTGCATGTGTTGAATTGCATGACAGGA
AATTATTATAATACCAAAACGTAGGGATAACGTCTTAATGATACTACTAT
ACCAACATATATATTTTACATGGTTCCTTACATCATTTGACTATTACAAG
AAAAACTCCAATAAAGACTTAATTTAACAGGATCCCCTAAGTTATGTTTT
TGTTATACTGTTTATAATTTGTAGGTGTTGACCAGCCCGACTTTGGACAG
AAGGATTTTTCAGTTTTAGCTTGTTGGAGGTGGAGCTGGAAATaacattt
tgtcaaatttttgctcttgcactttttttcaaaagcactAGAAccaattt
aagattttaattgaGGTAGGGATGTGCGTGACGTTTATTTGACGATATAT
TTACGTCATCAGCCGCCTTATTATATGAGATTTGTGCCAGCGATTTTGAT
CATAGCAAAACTTCTAGCTCAATGAGCTGACAGTCTTAACTCTAATGACT
TTTCTGCTCCAAATGATTGTTGGGAAGTACAATATACGGTTAGACTGTGA
TCTGGCTATTATACTACGACGAGTTACTGACTGCTACGGATAATAATATA
CTCACAATAGTTTTGTTCAGTTGTTCGTAAAAATACGTTCAgacttcaaa
atttgtaaaaaggaTCTTATAAACCATTCCATGCGTTCGTTGCTGAAAGc
agttttttaaaagaacacttGATATGGGAAGATTGACGAACTTCATTGAA
AGGAAGCAAAATATATAAGGAGAATCGTTTctagacccccccccctggaa
tcCATTTTCGCCCAACCAGATTAATTTTTCGCAGGTTTGTTTATACGTAG
TCAGAAACTGACAAATTCTTTACGGACGCTCTCTACTTACAAGGTAATAT
TTTGCTTTATTTAGTCTAGATAATATATATGAAGTATTTAGAGAAGATTA
TTTTAAAAACGGTATCTTAGCTATTATgtattcattcatttattcatttG
TATATATCGGTTGACTATGATGTTAATTtatgtaaattttcattttaaaa
cttttagaaatcttttttctaaTGATACTTTTTGCAagaattgaaaatct
ttttcatataaaat
Run BLAST on NCBI

transcript from alignment at scaffold_86:831650..851180-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073016 ID=TCONS_00073016|Name=TCONS_00073016|organism=Clytia hemisphaerica|type=transcript|length=19531bp|location=Sequence derived from alignment at scaffold_86:831650..851180- (Clytia hemisphaerica)
ATATTGTTCATGTGAAATTTTTTACGTTTAACGTTGGAGAATTAAAAGTT TGAAATTAAAATTAAAATTTGAAAATCTCACTTGTTCAATTTGGAATAGT GGAGAGCAATAAAAGGTGTGAATAAAAAGCTCAACCATCGGTGAACAGAA TGTAGTTTTTACGAGTCAAAAATTTATGATAATAATTCGAATTGGAATAA ATTAATGAATAAAGATGACGACCACGAAACGGTACTTACGACGTTTCAGT AGCGTCGATCGTGCGTCCGTTGATCGGGAACAGGTGAGTCCTAAAGGAAA AGATCTCTCTTTCATCAACGGATTAGAATAGGTGGATTAAGAACTCATAG AAAACACTCCTCGTTAGGTTATCAAACTTTTTTACGAGTTTGCTAGCAAT TAAAACTTGATAAGTTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTCTCTTGGGAGCAACGAG AGAAGTTAATCCACCTATTCTAATCCGTTGCTTTCATGAAAACTGTCTTA AAGAACAGATTGAGAAAACCCATATTTGTGTATTCGTGTGTGTTGCTTAG CAGATCCTGTTGGAGAATAATAGACATTTTGTACATTTCGATGCATTGCT CTTAAAGGGAAAAAAATGATCCCTCAAATTTTAAATTAATGAATTTACTT AAGGGTTTAAAACCTTTCAAAAACTTGAAACTGAAGATGAAAAAAATGGG TTTAAACTAAAATTCATATATTTTTCTGTAATTTTAAACTTTGCCGCATT CAAACTTTTTACTACCTTTCCTATGGGACAAAATTTACAATCCTCTTGGA AGGTTTGCTCTGGGGTTTTCCCGGGGAGGGGTAATTGTTCTTCCTCATGA GCACATTTTAATCTCACATCAAGTTTAAGTTTTATCTCTTTTCCTGTTAA CAGATCGTAAAATTTTAAGTCACTTATAAAAGTCTCAATCTTAATTTTTT TTATCAATTTTCAGGTTCTACCGGAGGAGAAAAGTTGGATGTTAGCTGCT GCCCATGGCAACATCAAGAAGCTCGAAAGTCTCCTCAAAGAATACCCTTC CCTGGCGAAGAAGAAGGATTTCGTTATGGGTTACACCGCCCTCCATTGGG CCGCCAAACTAGGGCGTACCGATATTGTGAAATTCATTATGGGTGCAAAC GTTGATATTCATTCGAAATCGCATGGTGGTTACACGCCCTTACATATTGC TGCCATGAGTGGGCGGGACCAAGTTATAGTACAGTTGATTGAACTTTATA GTAAGTGTTATTTTACTTTCACTATATGACGTTCGAAATCTGCCCGGGTA GTTTGATTCTTGGCGTTCGATCGGACGTTTACCTTGTAGCATCAAAATAA TCACCAATAAATTCCTTCGGTTTGACACTTCTTAGACTATTGTGACCTGT TTCAACAACTCATCTTTTTTCAAATTCTTTTTTACAGACGCAAACATTCA CACACGTGACCATAGCGGTAAGAAACCACGGGATGTTGTCAAGGATACCG TAGCTGCTGACGTTCAAAGTAAGTCCGCCATTATGGTGTTCATTTCGAAT GTCTCAACAACTTGAAGTAATTCTCTGGTCTTCAGAGGAATACCATAGAC TTTTTTTTTTTGCTTATTTATTTATTTTTCCTTTTCTTTTCTTTTCTTTT ACATAGTCTAGTACCTCTAGTACCTCTGGCGAAAAAAATCATAGACTATT TTATCGCTCTTTTTATCGAACTCATTACAAGTCAACGATATCAGATTCCT TTTGATCTCCGAGTTATGGATGTTCAATTTAATGAGAGTTCCATTCTTAG ACAAATAAGGTATAAGTTAGGTAAGGAGTCCTTCAGTGGTCCCCATTGAG TTTCAAGCCGAAGGCTAGAGGTCAATCTCCTTGGTAGGATTTGAAGCCAA CAAATCCTACCAAAGTTGCGCGGCCTTGAGCGACCCGCCNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTTTTTACACAAA TGACAGATTGAAACTAAAATTTACCGCTTAATTTCGAAAAATATATCACT CGAAAACAAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNGATTCAATCCGTCATCAAAAATACGGCGCATATTTTAAGGCT TCAATTTTTCTTGCCTGAGAAAGGTTAGAGATTGACCTCTAGCCCTTCGG GCTTGAAACACTCAATGGTGGTCCCACATGCGTTCCAGCTTTCGTTTAGT GTCTAGATGTATGTCGCCTTTTTGGCCCAGCGCTAAGCGAGTGGGCCTTT CATTTGCAACGTTCTGTTCGTTCGTGTGTCCGTCCGTTTTGGTAGAAACG GCGCTTAAAACCAGTATCACACTTTTTGCCGTCTGGATAGGGAAAAGCTT GCTAAAGTCTGATACTGGCTATAAAAGATATATTTTCTGATTCCGCGCTC CTTCAAAACAATTTTCAAAACAAACCAAGATGGCGGTCGAAGCGAGGAGG TTGATTCATACTTTCTTGAACATTTTCTTTGCTTAGTGGTCAAGAGATTT TCAAACCAAAGAAATTTTGTAAAGATTTTCTTTATAAACCTTTTTCAACA TTCTTATAGTCTTTGCTCAAGTTTTCATAAATTTTTATGAGTGAAATTCT ACCTTAAATCACTTTCATTTTTTTAGTTTCTTGTATTCAAAAAGACTTTA TTTTTAGGAAATAATGGCTTCTGATATAGAAATAAATAAACTGAAATGCA GCTCATGTGTAAATTTGAATAAGATTTGAACTTTTTTCTTGATGCTACAG AAGAAAACAGTCACTTCTGGATCTGTCGATGTTAACAACGGTCAGTACAA CATACAGTGGTTGGGACGTGGTATGATTTTCAAACTCAACACATAATTAT TTCAAGTAAACTAATTCTGGAATTTGGTAATGGAAACTAAAATGGAGCTC ATGTGTAAATTGGAACAAGATTGGAACTTTTTCCGAGATGCTACGCGTGC GTGAAAATTATTTTTTCTGGATCTGTCTCGTTTGGCGAAAGGTGCGGTGG CTTGATTTTTCAAACTCGACACAGAATTATTTCAAANNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCATACATATGCTGCTTTGTACGCTC GATTTCAACACGTTACTTTTCGCTGGGCCTTCACGCCCAACGGGCTTCTT GTCCTATTTTGATAAAAGTGTCGGTTTATATTTTCTTATGAAATTTATGA TAATTCTTCCTTTTTTTCGTTTTTCAGGAAAACTGGGACGATCACTTATT CTCGGTATGCGATGATTTTTTCTTTTCCTTTCTTTGCTTTGTTTTTGATC GATTGATTGTTAAGTGAGTTATACATTAAAATGCACATTGGGCTTTACCA GAAACGAAAGCCGTATGTCAAACATCTTTAATGTAGGTCCGACCTTTTGT GAGCTACTTCCTTGAATACAACTGAAAAAAAATGCTTAAAGACTTCCCAA AGTCACCCACGGCACTCGGTGGGAGCAAAAGGTGTGCGTCCAAGGAGGTA TACGATTTTATTCCTTTAAAGAAGCTCATGATTTGACAGGGAAAATCTAT ATCTTAAATAAAGAAGCCTTCAGGAAGCCTTCTTTTATGCACAGAAAGGA TGATCGAAGTAAACTCCTGTGTCAGAAATTTCCATCTAATTTGTAAAGTC AGACTAATAGTCATCTCCTCTAACCACCCTCATCGTTGTTTTGGTGTATG TCTTTGAATTTATTATTTGATAACGTGACTGAGTAGTTTTTAATGATTTG TATTGTAAAAAACTGAGCTTTAATGTTTGAATGGAAATTGAACGAATAAA TAAATTAGTGAATGGATTAAGTAAAGGGTTTCGACCCAGCGTATTTCAAT TCAAGCTTTATTTGGCTAGGAAGTAGTTTTTTTTTTCATTGCTTGTTACT AAATTGATATTTTTACAATTTTTAGCTGTATTTCACTTATTTTATCTTAT CTAGTTTTGTCAATATTTTTAAGCATGACTTTGTAGCTAGAAGTTTTTAC AACACGCACACACATACACGCTTTTTGAATAATTACATCACATACATTTC ATCACATCATAACATAACATTTTAATCAATTATGTCAAGATATCTACCAG AAAATCATTACATTAAACCACAGCTATCCTCAAACCCAGCTCCAGTGTTA AAAAGTAAATTAAAGACACTTTAAATTTTTTGCCAAATTGAAAGAACGAC GAGCCTAAACCATGATTGACGATTTCTCTGTTTGCAGCGAAGACAAAAAA GGCTGTAACTTTTATAATATAATTGGAATTAAATAGCGGTTTTATTCGAA NCTTTGTACGCTCGATTTCAACACGTTACTTTTCGCTGGGCCTTCACGCC CAACGGGCTTCTTGTCCTATTTTGATAAAAGTGTCGGTTTATATTTTCTT ATGAAATTTATGATAATTCTTCCTTTTTTTCGTTTTTCAGGAAAACTGGG ACGATCACTTATTCTCGGTATGCGATGATTTTTTCTTTTCCTTTCTTTGC TTTGTTTTTGATCGATTGATTGTTAAGTGAGTTATACATTAAAATGCACA TTGGGCTTTACCAGAAACGAAAGCCGTATGTCAAACATCTTTAATGTAGG TCCGACCTTTTGTGAGCTACTTCCTTGAATACAACTGAAAAAAAATGCTT AAAGACTTCCCAAAGTCACCCACGGCACTTGGTGGGAGCAAAAGGTGTGC GTCCAAGGAGGTATACGATTTTATTCCTTTAAAGAAGCTCATGGTTTGAC AGGGAAAATCTATATCTTAAATAAAGAAGCCTTCAGGAAGCCTTCTTTTA TGCACAGAAAGGATGCTCGAAGTAAACTCCTGTGTCAGAAATTTCCATCT AATTTGTAAAGTCAGACTAATAGTCATCTCCTCTAACCACCCTCATCGTT GTTTTGGTGTATGTCTTTGAATTTATTATTTGATCACGTGACTGAGTAGT TTTTAATGATTTGTATTGTAAAAAACTGAGCTTTAATGTTTGAATGGAAA TTGAACGAATAAATAAATTAGTGAATGGATTAAGTAAAGGGTTTCGACCC AGCGTATTTCAATTCAAGCTTTATTTGGCTAGGAAGTAGTTTTTTTTTTC ATTGCTTGTTACTAAATTGATATTTTTACAATTTTTAGCTGTATTTCACT TATTTTATCTTATCTAGTTTTGTCAATATTTTTAAGCATGACTTTGTAGC TAGAAGTTTTTACAACACGCACACACATACACGCTTTTTGAATAATTACA TCACATACATTTCATCACATCATAACATAACATTTTAATCAATTATGTCA AGATATCTACCAGAAAATCATTACATTAAACCACAGCTATCCTCAAACCC AGCTCCAGTGTTAAAAAGTAAATTAAAGACACTTTAAATTTTTTGCCAAA TTGAAAGAACGACGAGCCTATACCATGATTGACGATTTCTCTGTTTGCAG CGAAGACAAAAAAGGCTGTAACTTTTATAATATAATTGGAATTAAATAGC GGTTTTATTCGAATTCTATCAAAAGTTAATACACTCTTCTCGAGATGCAT AAATTTATTGTTGTCCTCGTTTTCAAACAGATTTCATTGCTATGAAATTA TACATTTAAACCAATTTAAATTCACAAAAGGCAAACATTAACTCTAAAAC AAAAGTACTGGAAATTCAAAATGTCTCATGAGGTGTAAACAGCACAATTA TCATTGAGAATATGTAATTTTATAGCAATGAAATCTGTTTGAAAACGAGA ACAACAATAAATTTATGCATCTCGAGAAGAGTGTATTGAAGCCTCTTTTG ACTACCCTAAAAATTCTATTGAGACAGACGTTTTCTTTTGGATATCTTGT CAATTAATGTTTACACACACACACACATACCATTACATCTTAACACATTG GGCTTTTCCAGAAAAAAAACGTGCACCCCCTGTTGAGGAGGTCCAACCTT TTGTGACCTACCCCCATGGAATTCCGCTTATTTTTGACGGATTTTCGTGT ACCCTTATGGAATTCCACTGCATTTCAAACCTTACGCCCTTGGAACGAAA ATGGACCTCCTCAACAGGGGGTGCACGGTTTCTTTCTGGAAAAACCCATT CATAACTCACAATAACCATCACTAATTCACTAATCATTAATTAAAGAAAC ACACGGAGTTTACTGCACTGACATTTTTTCTATGCATGATAGAAACCCCC CCCCCCCCCCCCGACACCCTTTTATGCCCCTTTTACAACGCACGATAGCC CCTCATCCCCTTGAACAGAAGCCTTCTAATATACAGTGGATTGAAATATT TGTCTTAAAATCTGACTGGTTCAAAACCATTTCGCGACTCTCAGAGTTTC ATAGATCGCGCACTTTACATGTATCATATGCTTAAAGGGGGATTTCCATT TTATTTATCTCATGGCTTCAAGAACTCACTTCCAGTAATGGGCGTGATAA GCTTTTGCCTTACCAGAAGATTCTAACATCTAACATTCTTTTTAAAGAGG AAATGGTTTTATCCTCTTTAAAGTAAAATAAACCAGCCGAGGCTGGAAGG TCAGCCAATAGAGATTAGCTAGATAGCTTTAATAAGTGGGTTAACAGATG TAAGAGATGCACTGAAACAGAGTAGACTAAATATGTTGAATAATGTACAA AATGTGAAACATTTGATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATACATGTAATATTTCCCTACAAACTTGTACACAGAGCCGGATTGGATGC TAAAAGACGCCTCAGTAGTACGGAAATCATCCGCCCAGCTAACCCATATC ACTCTACCGTCGCCAAAATCGGGTGATAGACGCCTTGGGCGGAACTTCCG CCCTTCTATTAGCACGTAACAAAGAATGTGTTTTCCGACCACTGGAAGAG GTGTATCAATCGCGTATCGAATGGAGATGGTTTTTTTGGGCGATCGACTT TGAGTTTAAAATGCAGACAACTGAATTTGTTCCTTCGTGTGGGTTAGACT TTTCAAGTTTTTCTGGTTTTGAAAGAACCCAGAGTTGCTTATTCCTGAGA CTCGTCAATACCGTAACTTAGTCTAATGTCCGACACCCTTCTTTAGAGAA AGGAATAGTAGAAAGGTCGGAAACTATATTTTTTACTAAGCGACCAGAGA GAAAAAATCTTTTGTCTATCAGTGATTCTGACCTTACTATTATTCCTATC TCTAAAACTGGGTGTTGGAATTAGAAGANTAAGTGACAAAAATTGAAGCT TGCAACAGATTTACACTGGAAATACTTTGGTACAACACTGACTTATCACA TCTGACTATCGCTTGAGCCGCCATCTTGAAANTGAAGTAGAGAGCCGCAT GCTAATGGAGAGTAAACCGAAAACACCAGTTTATCCACGGTTTCTCAATT TTAAAATTCGGTTCAGTCCACACGAATTCCCTTTCAACAAGACGTATAGC TGCTTCTTAACAGAAAAATATTTTCGACTGACCGGCCGAACGACTCCCAC TTTTNAAAGTTAACCCGATCGGAAGAAAGTTTAGAAATAAAAGTGAGATC GGAAAATCGGATTTTTTTTTTGTCGTCTTATGGAACTGAATTTCACCTAT TTGAATGCTCAGCTTAGGCTGACCAAATATTGCATGTCTGATTTCTTGAC AATTCATGATATGTACCATTGCAATGTCTTCACGGAACCAATAGCTGATT GGCTGTAAGTGACGTAAAATCAGTCAATACGTCACTTTCAACCAATCAGC TGTTGGGTCCGTGGAAGACATTGCAATGTTGCATATGGTGAATTCATGAA TTCGACGAAAGTTTTCTAAATTTTGATTGATCCACTGTATATTGAAAATT AGTGTTCCTTTCAAATCACGTTGTCCTCTCTTATATACATGTAATATTTC CCTACAAACTTGTACACAGAGCCGGATTGGATGCTAAAAGACGCCTCAGT AGTACGGAAATCATCCGCCCAGCTAACCCATATCACTCTACCGTCGCCAA AATCGGGTGATAGACGCCTTGGGCGGAACTTCCGCCCTTCTATTAGCACG TAACAAAGAATGTGTTTTCCGACCACTGGAAGAGGTGTATCAATCGCGTA TCGAATGGAGATGGTTTTTTTGGGCGATCGACTTTGAGTTTAAAATGCAG ACAACTGAATTTGTTCCTTCGTGTGGGTTAGACTTTTCAAGTTTTTCTGG TTTTGAAAGAACCCAGAGTTGCTTATTCCTGAGACTCGTCAATACCGTAA CTTAGTCTAATGTCCGACACCCTTCTTTAGAGAAAGGAATAGTAGAAAGG TCGGAAACTATATTTTTTACTAAGCGACCAGAGAGAAAAAATCTTTTGTC TATCAGTGATTCTGACCTTACTATTATTCCTATCTCTAAAACTGGGTGTT GGAATTAGAAGAGACAACTTACGGTAGTATATTCTTGAACGTTGAAACGC AGAAAAGTTTTAATTCTTTAAAAAGCATTTTTTTATTAAGTAGTTTGATT TTAACAAAAATTCTTAACCAAAATTTTACTTTTATCAAATTTAGTTATAT ATTTATAGAGTCTAAATTTTTAGACCCAAAATTTCTGTATCTTTTATTTA AATTTTTTGATATAGTGTATCGATAGTTTTCTTTTTCTTTACGACGTTTT GTTACTTTTTGGCATTTTACTGCTAATATGTTTTGCGTGATACCTGTTAC AATCAAACTATTAACAAAGTCGGTGATGTACATTTTGATTTTGAATTAAA CTCATCCGCTATTTCGCCCTCTTTTACTCGATTTCCAAAATTTGGTATAG GTAAACATTAATTTGTTTTTTAAGAATACATTAGATTTTAATTTTTTTAA TTTTTACAAAATTCTTCTAACATTTTCTGTCATATTATTTATATATTTAC ATTCATTTATGATCAGTTTTTTGTTTTCGTGAGTCAAGTGATCCAATAAT GGCAGTCCTAATACACAGCTATCTTAAAACACTGGGTTGAACTTCTTCGC CTGGTGAAGCAAAATGATGCAGCAATCTGCAGCCAGAGAAAGATACGAAT CTCTCTCTAGTGTTTGTAAGATATTTTTGGTCAAATTCCAAACTATAAAG ATTAAGAATCAATCTAGATCGATTAATCTGCAGATACTAAAAGTTTGTAT ATCAAAGTTTGATTTTTGGTCTATTTTTTATACTCTGACAAGGCAAAATT TCAAAACACCGAACCAAATTTTCACCCGAATGAGTAAATTTTGATTAAAT TTTATTATCGTGATATATTCGCCTGTTTATAATATTGTCACAAATGATAT TTTAGTATATTTCTTCAAAATGAAAATTGGAGAAAAAATGAAGCCATACT CCATACCTTGTGTTTGATTCAAATTTGAAATCTTTGACATGGTTCTAGGG ATGAGTAAAATCTCGTGACTTTTCTCAACCCTCAATTTGGGCTTGAATTT GACACTGTCTGTCCATCTTTCTGTCTGTATGTCTGTCTATCTAAAAATCT CTTGGACAACCTAGAGTTTCTGAAACTTTCTCCTTTTCATTTTTTGAAAA TTTTGAACTTTTCGTTTATCTTTATATTGGGTCTTTCGAATTATACAGTT GCTGCTCTTTAATTCGATTTTCAAGGGAAATAGGATTTTCGTCGAATAGT AGAGCGTCTTTTATGGGGGTTTCTTGTTGACGGTGACTTAATTATCGAAT AATGGAGGGTATCGAATACTAGAAGGTCGAATTGGAGAGCGTCAACTGTA CTTACGTTTATCCGAGTCCATTTGGCAAATTTTCTTACAAAAATATTTCT TATGACATATCATAACTCATTTTTTCAGACCCGAATACAGTATTAGATTC ACGTATCGTTGCGCCAACGTTACGACGTAACCTTAATAAACCACAACGTT CACGGCCGTCAAGTTTTATCAAAACATTATCGGACGGTGAGATGAGCCCA ATGGCCACACCAGAAAGTGTACGGAAAAATATTAAATCCATCGGAGCAAG TGCTCAAAGATCTGTGAGTTGTTTTTTTCTTCTGTTTTGTTCTGAAATAC CCGCCAGAGTTTTTTCGCGAGCCTTATGCTAATAAATAAATTTCATTTTA AAGGTTACGCCATGGCGAAATATAATTTGAAATCAAAAATCAAATCGATT AACTCTTTTTCTGGATTTGAAATCACAGTAGATCATATTTTAATTTGAGA CTGGAAATATTATTAACTTAAAAAGGGAAGTGCTTAAGTTGCGTCCGACT TTCTGCCCTGCCTTTTCATTCTAATTGTTAGAGTAGGCACAAAGCTGCTT GAAAATTGGCAGCTAAAATCTTTGCTCGAAAAAAGATTGTAAGAAGATTT TTATAAAATGTTTCAAGATTTTCGATGATGCAAAGTCAAAACTGAAAATT CAGAAATTCTCAAAATGACAATTTTGATTTAACAACGTCTTAAAAGTTTC TGAAAACCGATCTCTTTTGAAAATAGTTCCATTCATGTATGGAATATGCT GTGAAAATTTTAGAAAAACAGCTTAACTGAAACTGAAAATATTAAGCTTT AAAGATATTTTTGTATTTTTCTCCTATATTTTGCAAAAAAATGACAGAAT TTGCTGGTTTTGCTGATGCAGAGAAGATTTTTATATATAATGTAAATTTT TTGTTATTAACTATTGACCCAAGCTGATAGAAATGGAATTCCAAGATTTT TTGCTGTTTCTCATATTTAGAACTTTCTGTTTTATCAATGCTGATTCTAG GGCCCCAAAATACTGGTTGACCTTTAAGATGTTATATCTTTTACCCATCT TCTAAAGTCACAGATGTATCTGCATTTTCTTAGGTGTAGAAAGTTTTCCC ATTTTCATAACCTATTTTCACTATCCAAGGAACTAGAGTGAGTTATATGC AATTTTTATCTAATTTTGTGTTGAAATATTCCCTTCAAACGCAAAATGTT ATTTTGAATCTGTCTCAAACCATAAAAAAATGCTCATTTTTAAGTATGAC CATCATTCTTTCCAAATAAACAAAAAACGTCTAATTCTGATAAATCTACA GGTCAGAGTCCTCATTTTAATGACGACCTACGTTTTGGGGGCCGTCTCCG TTTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACTATATTGCATTGTCT TTAAACATTGAAATTTCTGCCTATCTTAGAAACGTGCAATATCTAATCTG TCTGACTTCCTAATTTCAGATGTCATTCTTGAAAAAGAAAAAGAAAGACA AGTGAGTACCCATTTAATTCTTCTTCCATAATTTCTCTGATTTTGGTCGT GTATTTTCTACTGGCCACTCCCAGTACACTCGGTCGAGTTTTAACATTCA CATTACAGTCTCTTTAACTCGAACAATTTTTCCGTTCCCTTCAGTAGTTA ACAATGCCTAAAGCTTACTCCATAACTTGAAATTTTGATAAATCGAACAA ATTTGTATTCCGCGTGCGTGTTCGAGTTATTGAGACTCCATTGTATTTAT AACATTTGATTTACACTTTACTAAATAACATCTTTGCAAAATATATTGAT ATTTGATCGACGTTACTGTTGAGATACTGTACGTTGTGCGACCGTAGTAC AGTGGTAGAGCATCCAGCTACGGTTCGCAAGGTCATTTGTTACCTACATT TTTTTTTTCATTTTCACAGATTACGTGACGAACAACTTTCACCACGTTCC CGTCGAAAAACACCGGACGATGAGCACCCACAAGATGCGCCTTGGAAACA GGAATGGAACGAAAAACAACGGCGCCGTCCAAAATCCATTGAAATTTCAT CGCCAACGGAAGTAAGTTCGACCACCACGACTCCAACCAAAGAGAGCGGT GGCAAGCCGCCTACCATCAGGTCTAACTTAACACCAACACGCTACCAAAA CATTGCACAGCAACCAGTGCCACCGCCACAGAACGAACAACTAGGTCAAT CTACAATGTCTTTTTTTCTTTAAACTCTTTTGAGATGTTTCTTCCCAATC ATTCATTATACATATTATGATACATGCATAACATCATCTTATGTCATAAT TTACCATGCTACTTTTATCAAGTAATATGAACAATTACTGTGGATAAGCT GCCAGTTTGAAGGTTTGAAGTTATACTTTGTTCAAGCCTTTCTTCAATTA CAATTGGTCTTACATTCGTTCAGTTGGTATTTGGAAATGCATGCTACATC TTTCATATTACATACTGCACTACATCAATATCAATATGCACTCGTATAAT ATTATACAGTAATATGAGTATTACACGTTTTGCTCTTACCCCGAAATTGG GGACAATAATAGGATGTTTTTAGACAGTATGTTCTCTATGATGAACATTG ATTTTCGCATTTTGGAAAGTTTCTAAGAAGGGGAGAATATTGGGGACGAC AGTTTATTTTGAAGATTTTAAATGAAGGTTTTTACGAATTCTTGCATTTA TATATTACAATACGTATTTTAGTATATTTTTAATTGCAATATTTTTTATG TAGCTGTTATCACCGTTCCCGACAGATGACATTGACCACAAATCACATGT TTTCTAAAAAAGATAATATAAAACACGTACTATGGTAATTTAAGCACTGA CGTAATACCAAACGAGCAACTGTAGCACACTGATATTATAAACAAACATT ATTGGATATTGGAGTAACACTGAAAACTGGTATCCACTTTGCACGAGTCT AGCACATTTTATGGATAGGAAAATTCTGTACTTTTGCACCAGGAACCTGG CCTTTGGATTTCAGAACATAGATATAGACATCGCGTCGAAGTGCATGTGT TGAATTGCATGACAGGAAATTATTATAATACCAAAACGTAGGGATAACGT CTTAATGATACTACTATACCAACATATATATTTTACATGGTTCCTTACAT CATTTGACTATTACAAGAAAAACTCCAATAAAGACTTAATTTAACAGGAT CCCCTAAGTTATGTTTTTGTTATACTGTTTATAATTTGTAGGTGTTGACC AGCCCGACTTTGGACAGAAGGATTTTTCAGTTTTAGCTTGTTGGAGGTGG AGCTGGAAATAACATTTTGTCAAATTTTTGCTCTTGCACTTTTTTTCAAA AGCACTAGAACCAATTTAAGATTTTAATTGAGGTAGGGATGTGCGTGACG TTTATTTGACGATATATTTACGTCATCAGCCGCCTTATTATATGAGATTT GTGCCAGCGATTTTGATCATAGCAAAACTTCTAGCTCAATGAGCTGACAG TCTTAACTCTAATGACTTTTCTGCTCCAAATGATTGTTGGGAAGTACAAT ATACGGTTAGACTGTGATCTGGCTATTATACTACGACGAGTTACTGACTG CTACGGATAATAATATACTCACAATAGTTTTGTTCAGTTGTTCGTAAAAA TACGTTCAGACTTCAAAATTTGTAAAAAGGATCTTATAAACCATTCCATG CGTTCGTTGCTGAAAGCAGTTTTTTAAAAGAACACTTGATATGGGAAGAT TGACGAACTTCATTGAAAGGAAGCAAAATATATAAGGAGAATCGTTTCTA GACCCCCCCCCCTGGAATCCATTTTCGCCCAACCAGATTAATTTTTCGCA GGTTTGTTTATACGTAGTCAGAAACTGACAAATTCTTTACGGACGCTCTC TACTTACAAGGTAATATTTTGCTTTATTTAGTCTAGATAATATATATGAA GTATTTAGAGAAGATTATTTTAAAAACGGTATCTTAGCTATTATGTATTC ATTCATTTATTCATTTGTATATATCGGTTGACTATGATGTTAATTTATGT AAATTTTCATTTTAAAACTTTTAGAAATCTTTTTTCTAATGATACTTTTT GCAAGAATTGAAAATCTTTTTCATATAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045286XLOC_045286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073016-exon-scaffold_86-1575043694:850898..851180TCONS_00073016-exon-scaffold_86-1575043694:850898..851180Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1575043694:849331..849616TCONS_00073016-exon-scaffold_86-1575043694:849331..849616Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1575043694:849063..849143TCONS_00073016-exon-scaffold_86-1575043694:849063..849143Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1575043694:845927..845953TCONS_00073016-exon-scaffold_86-1575043694:845927..845953Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1575043694:835518..835702TCONS_00073016-exon-scaffold_86-1575043694:835518..835702Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1575043694:834280..834311TCONS_00073016-exon-scaffold_86-1575043694:834280..834311Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1575043694:833720..833861TCONS_00073016-exon-scaffold_86-1575043694:833720..833861Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1575043694:831650..833027TCONS_00073016-exon-scaffold_86-1575043694:831650..833027Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1510915933:850898..851180TCONS_00073016-exon-scaffold_86-1510915933:850898..851180Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1510915933:849331..849616TCONS_00073016-exon-scaffold_86-1510915933:849331..849616Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1510915933:849063..849143TCONS_00073016-exon-scaffold_86-1510915933:849063..849143Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1510915933:845927..845953TCONS_00073016-exon-scaffold_86-1510915933:845927..845953Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1510915933:835518..835702TCONS_00073016-exon-scaffold_86-1510915933:835518..835702Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1510915933:834280..834311TCONS_00073016-exon-scaffold_86-1510915933:834280..834311Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1510915933:833720..833861TCONS_00073016-exon-scaffold_86-1510915933:833720..833861Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1510915933:831650..833027TCONS_00073016-exon-scaffold_86-1510915933:831650..833027Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1491911889:850898..851180TCONS_00073016-exon-scaffold_86-1491911889:850898..851180Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1491911889:849331..849616TCONS_00073016-exon-scaffold_86-1491911889:849331..849616Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1491911889:849063..849143TCONS_00073016-exon-scaffold_86-1491911889:849063..849143Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1491911889:845927..845953TCONS_00073016-exon-scaffold_86-1491911889:845927..845953Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1491911889:835518..835702TCONS_00073016-exon-scaffold_86-1491911889:835518..835702Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1491911889:834280..834311TCONS_00073016-exon-scaffold_86-1491911889:834280..834311Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1491911889:833720..833861TCONS_00073016-exon-scaffold_86-1491911889:833720..833861Clytia hemisphaericaexon
TCONS_00073016-exon-scaffold_86-1491911889:831650..833027TCONS_00073016-exon-scaffold_86-1491911889:831650..833027Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:831650..851180 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.15556 1.09199e-05 0.000254652 0.484185 0 0 0.118143 0.277581 4.67942e-09 0 0 0 8.02873e-05 6.88279 4.16341e-08 0.344334 14.894 10.9856 5.62027 2.83773 1.03671 4.35102 2.13793 3.25248e-09 0.211824 8.89034e-05
Blast
BLAST of TCONS_00073016 vs. Swiss-Prot (Human)
Match: SWAHC (Ankyrin repeat domain-containing protein SOWAHC OS=Homo sapiens GN=SOWAHC PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.404e-23
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 2
Query:  290 PEEKSWMLAAAHGNIKKLESLLKEYPSLAKKKDFVMGYTALHWAAKLGRTDIVKFIMG-AN-----VDIHSKSHGGYTPLHIAAMSGRDQVIVQLIELYNANIHTRDHSGKKPRDVVKDTVAADVQRKLG 661
            P E +WML+A+ G    LE LL   P L  K+DF+ G+T LHWAAK GR +++  ++  AN     V+I +++ GGYT LH+AAM G  +V+  L+  Y+A++  RD+SGKK    +  ++A +++  +G
Sbjct:  266 PLEHAWMLSASDGKWDSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAMHGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVG 395          
The following BLAST results are available for this feature:
BLAST of TCONS_00073016 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWAHC1.404e-2340.00Ankyrin repeat domain-containing protein SOWAHC OS... [more]
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