TCONS_00072959 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072959
Unique NameTCONS_00072959
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1657

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072959 ID=TCONS_00072959|Name=TCONS_00072959|organism=Clytia hemisphaerica|type=transcript|length=1657bp
CTTTATGTTAAATGaattctgtttaaagattttcttattttatttattgt
gATTTTTAGGTTGTACCTACAGTATACCTTCTTTTCgattgatttatatt
tctttttcatctttttcatgtaataaaaattgagcaaagcaaaaaaaaaa
agatataaccTACCAATGAAATATACACATGGTGAAACGATGGAGTTGAT
TTGATCATACATTTATTGGACATTGGTtgcttgaagaaaaaaacatggag
AAATTCTTGCGAATCTTCTCAAAGACACCATCACTCATTGGTATGATTCA
CGTCCGGGCCTTACCAGGTACACCTCTTTACAAATCTGGATCGTTTGACA
ACATTGTTGACAAAGCAAAAGAGGAAGCTCAAGTACTTATTGAGGCTGGC
ATTGATGGTTTAATGATTGAGAATATGCACGATATCCCATACATGAATCG
ATCTGTTGGACCAGAAATCATATCATCCATGACAGTGATTAGTCATGAAG
TAAAAAACATTGCCAAAACAATTCCTTGTGGTATACAAATATTGTCTGGT
TGTAACCAAGCTGCTCTTGCTGTTGCTAAGGCTGCTTCTTTGCAATACAT
CCGTGCTGAGGGATTTGTATTTGCGCATGTCGCTGATGAGGGAATTATCC
AATCAGATGCCGGCTCGTTGTTACGGTACCGAAAATCTATTGATGCTGAT
GACATCATGATTTGGACAGATATCAAGAAAAAACACAGCTCACACCAGAT
AACATCAGACGTGTCGCTATCTGAAACGTGTCACGCTGCTGAATTCTTTC
TATCGGACGGTCTTATCATCACTGGATCGTCTACCGGACAAGCTGCCTCG
GTTACTGACCTTAAAGATGCCGTATCCACCGTGTCTATTCCGGCTATAAT
TGGCTCCGGAATCAGCCCGGATAATGtggaaaatttctcaaaagcaCACG
CTATGATCGTTGGTTcttatttcaagaaaaatgggCTATGGAGTAATGAA
ATTTGTATGGATAGGTTGAACTCGTTGGTTCGTGCTGTTACACAGCTGCA
AAATGAACCTCAAAGGTGAAAACCAGAGAGATAGGAAATGAAAGCTATCT
AGGTGACTGCCATGGAAACCTCGCTAGATAAAATAAAAGATGACTTATTT
TAAACGACAATATTGCATCAGCCATAAAAATCATGAttcaagaaaacgaa
agtggacAATCAATTCGGACAGTTTAAATCAATAATACGGATAGAGGGGA
AAAtcattgttttttattgatGTTCGTCGCACCTATTGAATCTGATTAAG
GAGGGGTGCTATAAACAGCTCTACATCATAAATTATAGAATAAAACATGT
TCATGTGATGCGATCTGTTTATTTGATGTCCTGACCCACCACgctatgaa
aaatatattggtCGAGCTATCGAATCTGTTTTTTATATATGCAATATTTA
GTATTTGATAGTTTACTTATGACGAATTTTGTATATTTCCCTCAAATAGT
AAATCCTAAAGGCAATTTATGACTATAACTTAAAAAATAGGTCATGGTTT
ACGAAAAACAAAGCCAGATACCAACCAAATAGCAATTTGAACATTAATCT
CGTACCCTGAGCAACTTGTACCACTTTTCGATTTCACTGATGAACGTGAT
ACAATCG
Run BLAST on NCBI

protein sequence of TCONS_00072959-protein

>TCONS_00072959-protein ID=TCONS_00072959-protein|Name=TCONS_00072959-protein|organism=Clytia hemisphaerica|type=polypeptide|length=274bp
MEKFLRIFSKTPSLIGMIHVRALPGTPLYKSGSFDNIVDKAKEEAQVLIE
AGIDGLMIENMHDIPYMNRSVGPEIISSMTVISHEVKNIAKTIPCGIQIL
SGCNQAALAVAKAASLQYIRAEGFVFAHVADEGIIQSDAGSLLRYRKSID
ADDIMIWTDIKKKHSSHQITSDVSLSETCHAAEFFLSDGLIITGSSTGQA
ASVTDLKDAVSTVSIPAIIGSGISPDNVENFSKAHAMIVGSYFKKNGLWS
NEICMDRLNSLVRAVTQLQNEPQR
Run BLAST on NCBI

transcript from alignment at scaffold_86:1309382..1316632+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072959 ID=TCONS_00072959|Name=TCONS_00072959|organism=Clytia hemisphaerica|type=transcript|length=7251bp|location=Sequence derived from alignment at scaffold_86:1309382..1316632+ (Clytia hemisphaerica)
CTTTATGTTAAATGaattctgtttaaagattttcttattttatttattgt gATTTTTAGGTTGTACCTACAGTATACCTTCTTTTCgattgatttatatt tctttttcatctttttcatgtaataaaaattgagcaaagcaaaaaaaaaa agatataaccTACCAATGAAATATACACATGGTGAAACGATGGAGTTGAT TTGATCATACATTTATTGGACATTGGTtgcttgaagaaaaaaacatggag AAATTCTTGCGAATCTTCTCAAAGACACCATCACTCATTGGTATGATTCA CGTCCGGGCCTTACCAGGTAGGTTATATCTTTTTTGGCGCATACGGTATA AACGAACTTGCCTTCCTGCTAATTAGACGGGTCCCCCAAGAACCGGATTG CACAATTATCCAAGTTTTTCATTTGTTCATGATTTTTGTGAATCTTTTGA AGATTGCCTCCTTCTCAATTAGAAGGGGGTTGGGCCCTTCAAGAATCGGA TTCAGTTGTTCATGTTTGTCCTtgtaaattatttgaaaattatttcatgG TTACTTTCACTTTTCCTTTTAacagaatttgaaatttcaaatggtAAAAC CGATTTAATTTAGAGTCATCATTGAGGTCTTAATTTCTTCCCACTATTCA GGTACACCTCTTTACAAATCTGGATCGTTTGACAACATTGTTGACAAAGC AAAAGAGGAAGCTCAAGTACTTATTGAGGCTGGCATTGTAAGTAGAATCA TATTTTTATGTCATTGCTATTAACGGGATGCTCAAAGGTGCCCTCAAAAC CAGAAAAATCTAGACCTCAGTTGAATTTAGTGAAAATCCAGGGACCTCTT GAAACCAGACACAAATCCAAGGCGGGCCTCTTTAAATTTAAAGTCAGCAG GGTTTTCATCATGGGTTACAAATCTTTCCTCGAATAACCCAACGAATAAC CCACAAGGAAATTAGGTATTACATGTTTGTTTCTTTAGGATGGTTTAATG ATTGAGAATATGCACGATATCCCATACATGAATCGATCTGTTGGACCAGA AATCATATCATCCATGACAGTGATTAGTCATGAAGTAAAAAACATTGCCA AAACAATTCCTTGTGGTATACAAATATTGTCTGGTTGTAACCAAGCTGCT CTTGCTGTTGCTAAGGTgacattttttcttcatttgtcttgatgtttttt tctgaacAAGAAAgtatttggattttttcttcgaTGGAAGACCCTAGAGT TGCTCTGGCATTTTGTTATTCTTAGCAGTGTGATTTTTTTCGAATCAGTT AGCCTTCACAAATCTTTACCCCATTCAAGCCCAAATAATTCATAATGCCG GGAACTTATTCAACCATTACCAAACCATGGTATGCAGCATGAACTGGAAG TCCCGTACTCAGGATGCACGATTTTTTCTCCATAGTATCCTTAAGGGAAC AACTTTGGGATCCACAAAATTAAGGAAAAGGAAGGGGGAAGCTTTTGTTA AGATCAGTAACACTTCCAAAAGGAAggaatcaaattttttaaagctaAGG GGTTTCTTTCGTGTTTTCTTTTTGCGATTAGCTTggaatttgcttttttt tcaatttgctattttttcaaacttattaCGTTattcttcaggtaggtcca tttagcatgtagcttgtttgctttaaatttccaaaatGCTTTCTAAGGAA CACAAAATTTCTATGGCTCTAATCATTTTTTGAAGTTACCTGCGTTTTTC ACAGGCCGACACTTTTACAGCTCGAACGTTCTGTGTTTTGTTGGTATTTA CATAAGAGGAGTGCATAAGGCATGTCTGTTTGGACAGTTTTTTCCCGAGC AAAAAAATCTGCAAGCAGCAGTTTGCATTCAATTATGGACAGAATGCTTT ATTAAGCTAATCTTTAAAAGCCTATCATTAGTGGGTTATATAATTGCTTT CAATTAGTTTCTCTGTGTTCCTTGTTGATTTAACAGTCATGTGAGAAGGA ACTTGTAATTAAACGTCAGGAAATGTGCAATTATCTTGCCAGATTTTGTA ATTAGCTGTCATTTTAGATTGCCAGTGCCAATATACTGtattgtgaaatt ttttaaagcGAATTGCAAAGCTTATATTTCTAAAGGCCTTTACTTCAATG TTTTGTCCAAACAAACTCCCTTTGTATTTATATTCCTTTGAAGAATAAAA CCATCTTTCAAAATCTACGTTGGgctatttccagaaaaaaacgtACACAG GGGCTGGAGGGTATGTTGGTCAGGAGATCCAGTTGTATTTAAAAGATTGT CAAAAACTCATTTTCCACGGGGTAAATTCACAATGCCCTGGGTTATAATT AGTGTCCAGCAAAGATTTAttttatacactggataaacgactcataaaac gatggagagcgctcattgtattttcattgtttcagaaaacaatggatgtt ctagctttgtccgcaaaggacaactgtcatggctcgaagatgtctgattt ttgaaaatgtttatcagtcttatttttaaaaggttctctagctctttctt tttgtacatttacagaaaaaaaagtttgaaagtaaggctagcatttcGAG CTGGAtgcatttgtgaaatctaatgtgaaaaaaacatcattagacaagaa attcagacaaaatgcttataatgacacaaaattttcaattggaaatatct ttccaagactgtccccagaacaGCTGAAATTAATATACaaaagacttgag tgtcttgtctccactgtggtatgaaaatcctttggaggcacgtggtggca aggtggtttttttttaggttaaagtttgaaaatttccggtgtcaacattc aatttcttatacacaacacgtcttttgcatctttctcacagcttgaaacg tcataacgaccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagg gaaggagagtgaacaataatatcattactgcggacatagctagtacacga gaaatcggcaaaaatctgttacttgtatatccagtgtataataaatcctt tcTGTCCAGAAAGTAGATTTGATGCTTGCCCGTAAAAGTCGTGTCAAGAG GATGAAAAATCCAGATGTCTCGGTGTACTTGTACTTGAGCCCACTAAAAA CTTTTATTGTAATCACAATAAAAAAGTGTAAGACCAATCTCTCTTTAAAG TCTCGTAAAAAGCCTTGCTAAGAGTTATATTCGAAACTTTCTGAGCCTGC TCGTCTTTGCCCTTTTGATTAATGTTGATCATGATTTTAATAGATTACTC ATAAACAATCCATCAAAGctgttttctttataaattGATTGAGTATTCAA AACTAAGGATGTTTAAATCAATAGACCAGAAGTACATTATAATTGGTTTT TTATCTATGTTTTGCAAAAGTGCAACGTTCTTTTCCGCTCCTTTGCTATA CTAAGCTTGACGTTATGCAATAGCCAGTATTTGATTCGCAGTGATTTACC AAGCATAATAACGCCTTTAAGCCTTTAGATAGTCATAAACAGGCTTCATC GATTTAAATGTTTTAATTAAACTTTGTtgtcagattttcaaaaaagattc aaTAATTGATATTTAATTGATTACCGCCCTTACTGTGCATTATCCTATTG TTTTTCTAATCCCCTATTAAAATGAAAGGGATAGATGAAATGTCATGATA GATTCAATAGGGTAAACCTCTTTTAAATACTTCATGCTTCAAAAAGGTGC AGTGTTTGTTTTAGGCCACTTTTAAGCAAAACTCAGTTATGCTTCATTGT AAGAGACTTGCAAATTCTTTCTGCAAACACATTATCACACAGTATGAAAG GGGGTGTTGTGTTCCTTTTTCCTGCAGATGTCTAAATAAGCAAGCTGTGA ACAGTAGGTATACTTCATGTACTGTATTTCATCGTGAATATGGAACTACA TGTCATCGTCTAATAGaggaaaattgtccaaattcCTTCTCtgttcaata tattttttagtgATTGCTACATTATTTAACCTAAACTGAAGTTCATATAT ATAAACTCGCCCAAATCGATTGAAATGAGCTCATTTGGCTCGCCATTCAC AAAACTGATCTTTATCTACCTTGCCCTTGCCCTTGCCCTTGCCCTATCTA TGCATGATCAAAGACTACAACTGGTCCGTTCTGTTAGCCTATTTCAACAC TTTTGAGTTCACTCTATAGATTAGTTCGATACGCGATATTTCGTTGAAGT TCAACTGTTTTTAACTTTCTGGTACTTCAATGTTGTTTTTCAATGCTGTT ATTTTTACTATTTGTATACTCTGCCCTAATCTTCACTTATTCACGGAATC TGGTAAATGAACGGTCTGAATTTCAGAATGGCCAAGGAGTAGCCAAAATG TTTCGAATTTGTTTGATGTAGAAACTTCTTACAAGGAAAACTTACTAAAA GATTGAAATTATTCAAAGATTTGCTTTTCCTCATTTATACAGGCTGCTTC TTTGCAATACATCCGTGCTGAGGGATTTGTATTTGCGCATGTCGCTGATG AGGGAATTATCCAATCAGATGCCGGCTCGTTGTTACGGTACCGAAAATCT ATTGATGCTGATGACATCATGATTTGGACAGATATCAAGAAAAAACACAG GTTGGTTAAAGAACAAAGaacataccttatcggccctttttacattggcc cttattggcgttatttttgggctcttGGCGTAATAAAGGCCGGTGTAAAA ACGGCCGATAAGGTAGCCTTTTTCAGTTGCAATTCGATTCAGTTTCTTGC ACACTTTTTGTGTTTGACTTTAAGTTCAGGAATTGCATGACCACGTGATT AATTTCGCCTGATGAAATAGCCAATCATAGTGGATACTGTTCAACCTTAC AATGTGACCGACTCCTGTATCATTTAGTCATTTTGAAAGATTAAGGGAGA CGAAGTATATGTCAAGTATTGTGCTACATTGACATATAAAAAACGAGTGA TTAATATCATTTGATACAGTGTCCAAACTTTTCCTATCATATTCATACGA AAGATTTCTGATTACACCCAATTTTTCCATCACACTAATATATTGGATTA TATCCATCAAAAATCtgtgaaaattaataacaacacaaaaaaaaactagg tcaagttttttctgatataatgttttgattttgatgtctGCAACTATAGA AACGTCTTcttgaatttgatattttgttaaaattcaaaacataacTTTTA CAGCATTCTTACTTTCCTTCCCAGCTTCACTTTTTATACTTTTAATCATA AAAATGCTAAACTATACCAACAACGGTATCATAGTTTTGTTTCTGATCTT GACATTCTTATCAACGTACCTTGCAATATTTTGCTAAGTCAGCATAAGAG AATGATATAACCGAACTATATATATACTTCACTACATACATACAGTCATA ATGtcgttttaagccaatcaaaataattgaaattttttgaaagtaagCTG GTGTTTTCTGAGAGCAGAAAGCATTTCATTTTGTTCTTCCGTAGTCAACA ATTAATTCCTATAGTGTACTTTAATACTGTAGTCTCTTTTGACTTCTATC CTCTATACATGAGTTTGTTCCAATAATATTGGTCGTTCGTCAACACTGTA ATTGTTATGACGCATTAACACAAGATTATAAACTGATACCTCACCTTCCA ACTCAGTGATAGTTATCTCATgaattcttatattttttatagCTCACACC AGATAACATCAGACGTGTCGCTATCTGAAACGTGTCACGCTGCTGAATTC TTTCTATCGGACGGTCTTATCATCACTGGATCGTCTACCGGACAAGCTGC CTCGGTTACTGACCTTAAAGATGCCGTATCCACCGTGTCTATTCCGGCTA TAATTGGCTCCGGAATCAGCCCGGATAATGtggaaaatttctcaaaagca CACGCTATGATCGTTGGTTcttatttcaagaaaaatgggCTATGGAGTAA TGAAATTTGTATGGATAGGTTGAACTCGTTGGTTCGTGCTGTTACACAGC TGCAAAATGAACCTCAAAGGTGAAAACCAGAGAGATAGGAAATGAAAGCT ATCTAGGTAGCTatgaatttttaaacatttttttctataagatcaTAATA TTGATTGCATTTCGTAAATTTCATGAACAGCTCCGTGCGGTCGATTTTAA ATGAACCACGGCCAGCTATGGCGCGTTGAATTTCTTTGGAAAGCCGGAAT CACATGAAAGGTGTGTTCCTCCAATAAccattttttttagaaacaacAGA TTCTATGTATACAAAACGCTTATAATATAAAAACGAACGAAATAAATAAT CAATAACGGTGAATTTTCAATCGTCGATTATGTTCGTATCTAATAGGTGA CTGCCATGGAAACCTCGCTAGATAAAATAAAAGATGACTTATTTTAAACG ACAATATTGCATCAGCCATAAAAATCATGAttcaagaaaacgaaagtgga cAATCAATTCGGACAGTTTAAATCAATAATACGGATAGAGGGGAAAAtca ttgttttttattgatGTTCGTCGCACCTATTGAATCTGATTAAGGAGGGG TGCTATAAACAGCTCTACATCATAAATTATAGAATAAAACATGTTCATGT GATGCGATCTGTTTATTTGATGTCCTGACCCACCACgctatgaaaaatat attggtCGAGCTATCGAATCTGTTTTTTATATATGCAATATTTAGTATTT GATAGTTTACTTATGACGAATTTTGTATATTTCCCTCAAATAGTAAATCC TAAAGGCAATTTATGACTATAACTTAAAAAATAGGTCATGGTTTACGAAA AACAAAGCCAGATACCAACCAAATAGCAATTTGAACATTAATCTCGTACC CTGAGCAACTTGTACCACTTTTCGATTTCACTGATGAACGTGATACAATC G

Coding sequence (CDS) from alignment at scaffold_86:1309382..1316632+

>TCONS_00072959 ID=TCONS_00072959|Name=TCONS_00072959|organism=Clytia hemisphaerica|type=CDS|length=4125bp|location=Sequence derived from alignment at scaffold_86:1309382..1316632+ (Clytia hemisphaerica)
atggagAAATTCTTGCGAATCTTCTCAAAGACACCATCACTCATTGGTAT
GATTCACGTCCGGGCCTTACCAGGTACACCTCTTTACAAATCTGGATCGT
TTGACAACATTGTTGACAAAGCAAAAGAGGAAGCTCAAGTACTTATTGAG
GCTGGCATTGATGGTTTAATGATTGAGAATATGCACGATATCCCATACAT
GAATCGATCTGTTGGACCAGAAATCATATCATCCATGACAGTGATTAGTC
ATGAAGTAAAAAACATTGCCAAAACAATTCCTTGTGGTATACAAATATTG
TCTGGTTGTAACCAAGCTGCTCTTGCTGTTGCTAAGGCTGCTTCTTTGCA
ATACATCCGTGCTGAGGGATTTGTATTTGCGCATGTCGCTGATGAGGGAA
TTATCCAATCAGATGCCGGCTCGTTGTTACGGTACCGAAAATCTATTGAT
GCTGATGACATCATGATTTGGACAGATATCAAGAAAAAACACAGCTCACA
CCAGATAACATCAGACGTGTCGCTATCTGAAACGTGTCACGCTGCTGAAT
TCTTTCTATCGGACGGTCTTATCATCACTGGATCGTCTACCGGACAAGCT
GCCTCGGTTACTGACCTTAAAGATGCCGTATCCACCGTGTCTATTCCGGC
TATAATTGGCTCCGGAATCAGCCCGGATAATGtggaaaatttctcaaaag
caCACGCTATGATCGTTGGTTcttatttcaagaaaaatgggCTATGGAGT
AATGAAATTTGTATGGATAGGTTGAACTCGTTGGTTCGTGCTGTTACACA
GCTGCAAAATGAACCTCAAAGGTGAatggagAAATTCTTGCGAATCTTCT
CAAAGACACCATCACTCATTGGTATGATTCACGTCCGGGCCTTACCAGGT
ACACCTCTTTACAAATCTGGATCGTTTGACAACATTGTTGACAAAGCAAA
AGAGGAAGCTCAAGTACTTATTGAGGCTGGCATTGATGGTTTAATGATTG
AGAATATGCACGATATCCCATACATGAATCGATCTGTTGGACCAGAAATC
ATATCATCCATGACAGTGATTAGTCATGAAGTAAAAAACATTGCCAAAAC
AATTCCTTGTGGTATACAAATATTGTCTGGTTGTAACCAAGCTGCTCTTG
CTGTTGCTAAGGCTGCTTCTTTGCAATACATCCGTGCTGAGGGATTTGTA
TTTGCGCATGTCGCTGATGAGGGAATTATCCAATCAGATGCCGGCTCGTT
GTTACGGTACCGAAAATCTATTGATGCTGATGACATCATGATTTGGACAG
ATATCAAGAAAAAACACAGCTCACACCAGATAACATCAGACGTGTCGCTA
TCTGAAACGTGTCACGCTGCTGAATTCTTTCTATCGGACGGTCTTATCAT
CACTGGATCGTCTACCGGACAAGCTGCCTCGGTTACTGACCTTAAAGATG
CCGTATCCACCGTGTCTATTCCGGCTATAATTGGCTCCGGAATCAGCCCG
GATAATGtggaaaatttctcaaaagcaCACGCTATGATCGTTGGTTctta
tttcaagaaaaatgggCTATGGAGTAATGAAATTTGTATGGATAGGTTGA
ACTCGTTGGTTCGTGCTGTTACACAGCTGCAAAATGAACCTCAAAGGTGA
atggagAAATTCTTGCGAATCTTCTCAAAGACACCATCACTCATTGGTAT
GATTCACGTCCGGGCCTTACCAGGTACACCTCTTTACAAATCTGGATCGT
TTGACAACATTGTTGACAAAGCAAAAGAGGAAGCTCAAGTACTTATTGAG
GCTGGCATTGATGGTTTAATGATTGAGAATATGCACGATATCCCATACAT
GAATCGATCTGTTGGACCAGAAATCATATCATCCATGACAGTGATTAGTC
ATGAAGTAAAAAACATTGCCAAAACAATTCCTTGTGGTATACAAATATTG
TCTGGTTGTAACCAAGCTGCTCTTGCTGTTGCTAAGGCTGCTTCTTTGCA
ATACATCCGTGCTGAGGGATTTGTATTTGCGCATGTCGCTGATGAGGGAA
TTATCCAATCAGATGCCGGCTCGTTGTTACGGTACCGAAAATCTATTGAT
GCTGATGACATCATGATTTGGACAGATATCAAGAAAAAACACAGCTCACA
CCAGATAACATCAGACGTGTCGCTATCTGAAACGTGTCACGCTGCTGAAT
TCTTTCTATCGGACGGTCTTATCATCACTGGATCGTCTACCGGACAAGCT
GCCTCGGTTACTGACCTTAAAGATGCCGTATCCACCGTGTCTATTCCGGC
TATAATTGGCTCCGGAATCAGCCCGGATAATGtggaaaatttctcaaaag
caCACGCTATGATCGTTGGTTcttatttcaagaaaaatgggCTATGGAGT
AATGAAATTTGTATGGATAGGTTGAACTCGTTGGTTCGTGCTGTTACACA
GCTGCAAAATGAACCTCAAAGGTGAatggagAAATTCTTGCGAATCTTCT
CAAAGACACCATCACTCATTGGTATGATTCACGTCCGGGCCTTACCAGGT
ACACCTCTTTACAAATCTGGATCGTTTGACAACATTGTTGACAAAGCAAA
AGAGGAAGCTCAAGTACTTATTGAGGCTGGCATTGATGGTTTAATGATTG
AGAATATGCACGATATCCCATACATGAATCGATCTGTTGGACCAGAAATC
ATATCATCCATGACAGTGATTAGTCATGAAGTAAAAAACATTGCCAAAAC
AATTCCTTGTGGTATACAAATATTGTCTGGTTGTAACCAAGCTGCTCTTG
CTGTTGCTAAGGCTGCTTCTTTGCAATACATCCGTGCTGAGGGATTTGTA
TTTGCGCATGTCGCTGATGAGGGAATTATCCAATCAGATGCCGGCTCGTT
GTTACGGTACCGAAAATCTATTGATGCTGATGACATCATGATTTGGACAG
ATATCAAGAAAAAACACAGCTCACACCAGATAACATCAGACGTGTCGCTA
TCTGAAACGTGTCACGCTGCTGAATTCTTTCTATCGGACGGTCTTATCAT
CACTGGATCGTCTACCGGACAAGCTGCCTCGGTTACTGACCTTAAAGATG
CCGTATCCACCGTGTCTATTCCGGCTATAATTGGCTCCGGAATCAGCCCG
GATAATGtggaaaatttctcaaaagcaCACGCTATGATCGTTGGTTctta
tttcaagaaaaatgggCTATGGAGTAATGAAATTTGTATGGATAGGTTGA
ACTCGTTGGTTCGTGCTGTTACACAGCTGCAAAATGAACCTCAAAGGTGA
atggagAAATTCTTGCGAATCTTCTCAAAGACACCATCACTCATTGGTAT
GATTCACGTCCGGGCCTTACCAGGTACACCTCTTTACAAATCTGGATCGT
TTGACAACATTGTTGACAAAGCAAAAGAGGAAGCTCAAGTACTTATTGAG
GCTGGCATTGATGGTTTAATGATTGAGAATATGCACGATATCCCATACAT
GAATCGATCTGTTGGACCAGAAATCATATCATCCATGACAGTGATTAGTC
ATGAAGTAAAAAACATTGCCAAAACAATTCCTTGTGGTATACAAATATTG
TCTGGTTGTAACCAAGCTGCTCTTGCTGTTGCTAAGGCTGCTTCTTTGCA
ATACATCCGTGCTGAGGGATTTGTATTTGCGCATGTCGCTGATGAGGGAA
TTATCCAATCAGATGCCGGCTCGTTGTTACGGTACCGAAAATCTATTGAT
GCTGATGACATCATGATTTGGACAGATATCAAGAAAAAACACAGCTCACA
CCAGATAACATCAGACGTGTCGCTATCTGAAACGTGTCACGCTGCTGAAT
TCTTTCTATCGGACGGTCTTATCATCACTGGATCGTCTACCGGACAAGCT
GCCTCGGTTACTGACCTTAAAGATGCCGTATCCACCGTGTCTATTCCGGC
TATAATTGGCTCCGGAATCAGCCCGGATAATGtggaaaatttctcaaaag
caCACGCTATGATCGTTGGTTcttatttcaagaaaaatgggCTATGGAGT
AATGAAATTTGTATGGATAGGTTGAACTCGTTGGTTCGTGCTGTTACACA
GCTGCAAAATGAACCTCAAAGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045261XLOC_045261Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072959-exon-scaffold_86-1491911889:1309382..1309698TCONS_00072959-exon-scaffold_86-1491911889:1309382..1309698Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1510915933:1309382..1309698TCONS_00072959-exon-scaffold_86-1510915933:1309382..1309698Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1575043694:1309382..1309698TCONS_00072959-exon-scaffold_86-1575043694:1309382..1309698Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1491911889:1310033..1310118TCONS_00072959-exon-scaffold_86-1491911889:1310033..1310118Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1510915933:1310033..1310118TCONS_00072959-exon-scaffold_86-1510915933:1310033..1310118Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1575043694:1310033..1310118TCONS_00072959-exon-scaffold_86-1575043694:1310033..1310118Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1491911889:1310370..1310546TCONS_00072959-exon-scaffold_86-1491911889:1310370..1310546Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1510915933:1310370..1310546TCONS_00072959-exon-scaffold_86-1510915933:1310370..1310546Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1575043694:1310370..1310546TCONS_00072959-exon-scaffold_86-1575043694:1310370..1310546Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1491911889:1314174..1314331TCONS_00072959-exon-scaffold_86-1491911889:1314174..1314331Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1510915933:1314174..1314331TCONS_00072959-exon-scaffold_86-1510915933:1314174..1314331Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1575043694:1314174..1314331TCONS_00072959-exon-scaffold_86-1575043694:1314174..1314331Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1491911889:1315424..1315787TCONS_00072959-exon-scaffold_86-1491911889:1315424..1315787Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1510915933:1315424..1315787TCONS_00072959-exon-scaffold_86-1510915933:1315424..1315787Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1575043694:1315424..1315787TCONS_00072959-exon-scaffold_86-1575043694:1315424..1315787Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1491911889:1316078..1316632TCONS_00072959-exon-scaffold_86-1491911889:1316078..1316632Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1510915933:1316078..1316632TCONS_00072959-exon-scaffold_86-1510915933:1316078..1316632Clytia hemisphaericaexon
TCONS_00072959-exon-scaffold_86-1575043694:1316078..1316632TCONS_00072959-exon-scaffold_86-1575043694:1316078..1316632Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072959-proteinTCONS_00072959-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1309382..1316632 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.16392 0.190988 0.280476 1.58066 1.33872 2.1752 3.08875 2.05175 2.62122 3.89452 1.52071 2.28999 1.07093 0.731307 3.16174 3.01964 2.27837 1.67592 2.51922 2.747 0 0.629454 0.902644 0.515032 1.26486 0.802763 0 0 0.549515 2.02527
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005137BtpA
IPR011060RibuloseP-bd_barrel
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072959 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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