TCONS_00072958 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072958
Unique NameTCONS_00072958
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2565

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072958 ID=TCONS_00072958|Name=TCONS_00072958|organism=Clytia hemisphaerica|type=transcript|length=2565bp
AAAAGACATCAATTTAAGATTTCTTGACtacaatttttgaaacaaaaatc
tgATAATCAAAATGGGCTGGTTCCTAGTCCTTTTGTGTACCATGTTGGTT
CATCACCATCAAGTAAAGTCAGctTATCCAAATCTGTCGGCAGAAAGCAT
ATCCTCgtctttttctgagctccagaGACGTCCGACTTCCATAACCGAGT
TTCCGTCTCTAGCAGCAACATCAATGAAATCCCTACAAGTGACGTCGTCA
ATCCAGTCCATGATATCAATATCAGTTCTACCAACACCCTCGTCAGCAAT
AGATCTGCCAAGTTCATCGTCAATTTATGTTCAACCAGAAAATTGTACCG
GCTTTTCTATTCCATGTGGTCCACAATTTGGAGATCAATTTGTACAAGCT
GGTGACGATGTTGCGACTTGCTTTTcatctttttcgaaaaaattcccATT
ATTCTCAAGAGTTAACAGATCGAAAATTTGTATATGCAGTAACGGATATA
TCACTTTGGACAAACTACAAAACAGTTTTAGAAAATCATTGACTTCTGGC
TATCCATCAGTCCTGATCCCATTTAATTACGATATGATAAGTCTTGGTAA
CAACATTCTGTACCGTACCACAAAAGATCAAAATATATTGAACCTTGTTG
ACAGAGATATCTCACTTTCAAAATCTGTGTCGTCCTTCAAATCAAAAGAA
GCAATCGTTGTTACTTTTAATAACGTTCCCCATTACGGTAATCGAAACAT
GATATTCCGTTATCAAGTTGTTATAGCTACTGATTACAAAAACACATACA
CTATCTTCAATTACGATCGAATGGATAATTCCGGCTATGACAATATTGGT
TACGCTGAACCAGATGGAGAGGTCTCTTGCACACCATACAAACGTTTTAA
CCTCAATGGACACACACTGACAACATCTTCCAACGTTGGTAAACCTGGAA
AATTTATCTTCTTGCTAACTAATTGCACGAATGACAGAGTTTTACCAACA
ACGACACCTTTGTTAACCACGACACCAGCAGCACGAACAAATTCATCTGA
AAAGATGGTAAAGTTAGAATGTCACTCCAATGGTTTCGAAGCTGGATTCA
ATTTAAAACGATTATCAGcaacgatggtaccctactctATCAGGTTTTCT
GGTAACAATAATTGCAGCTCAGTTGATAAGACTTCCGTAGGTCAGATCAG
AAACGGAAGACTTTGGATCGGCTCAAACTATACTCAATGTGGAATACAAA
CATCCTACAGTGGTGACAATATTATATTTGAACAAAAGCTAATCGTAAGT
TATGGATCCAAAAATCAACCACGACTTGTTTATAGATCACCTACGAGGTA
TTCGTACAGATTCAAATGCATTTTGAACAGAAATATCAACTCAAAATTGA
ACATGGATGTGGAAGATAAATTTCAAGACATCGAAGAGATTAACGGAACA
TCCAATTTTCAACTGGAATTGAAAATGACTCGACCAGACAGCGACAAAGA
ACAACAAATGGTCACTATTGGAGATCGTTTACGATTCACTTTAAACCTCC
CAAACGCTCCACAGAATGTGAAAACTTCACCTCAAAATTGTTACACAACT
AGAATAGATGGAAGCGGAAGATATAATTTGATTTCAAACAGATGCGTTAG
TCCGAATGTCAAGGAAACAACTGTCATCACTTCACTGGCAACTTCTCTTC
ATCAATTTTCGTGGGAATTATCAGCATTCCGTTACTTCGGTGATTCAAAC
ACTGTTGTGATCGTGTGTGAAGTTTTAGTTTGTAAAAACGATGCATTTTG
GAGGTTGAGTGAAGAATGCAAAAGATGTGGGCAAACTTCCAATAGAAGAA
AACGAAGGGAAAATGAAGAGGAGGAAAACCAGTCTGTTGTTCTACAGAAA
AGAACAGTTTCTTCAGAACCAATCTATATCATTGAAAAGTCACAGAGACA
AGAACAAAAAgtacgtcaaaaagacaatggAGCGATACCGAAACCAACTG
GCATAGCAATCATTGCAATTTTGGCAACTATCGTCCTCGTTGTGGGTGCA
GTTCTAGTCAAGAAAAGATTGTGAATTGAAGTGAATACAATTTAAGaaag
ttcactttttttttcatcaaaatattttttttagggaatttattttgaaa
cagAGGAGAAGGATAGAATGTAAAATTAAATAAAGTACGGTCTCTCACTC
ACATACCTTATCACATTGTTCAGATGTTgtctaaaatgaaataaacataA
GAAATGCATTCatacagtggtcaaagcaaagaTTTCGTCTGAGACGAAGA
AAAGCAAAGGCGAAGACGAAGAATGGATTATACACAGCAAATTGGCAGAT
ATTCCTAAAAATTTGGTGAATCAAGCAGAATTTTGAGATGGAAAAGCCAC
TTTATATACTTCACTGAGACGGAAAGTCGTCTGCTTTTATACAAATAAAC
GCCCGGTTATTATAActtaattttgtttttagaaagaaTACCACTAAAAT
GTACGACCCTTGCAATTGAGATCCTCTTTGCACGTTCACCAACACTTTTC
CGAGAATCAAGTCAC
Run BLAST on NCBI

transcript from alignment at scaffold_86:1258325..1276756+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072958 ID=TCONS_00072958|Name=TCONS_00072958|organism=Clytia hemisphaerica|type=transcript|length=18432bp|location=Sequence derived from alignment at scaffold_86:1258325..1276756+ (Clytia hemisphaerica)
AAAAGACATCAATTTAAGATTTCTTGACtacaatttttgaaacaaaaatc
tgATAATCAAAATGGGCTGGTTCCTAGTCCTTTTGTGTACCATGTTGGTT
CATCACCATCAAGTAAAGTCAGGTAATGTTCAATGctgtttatttttata
atttaatttGGATAATCGCGCTAACAACTTTTAATTAAAACCTTTTCTTT
CCACATTCGAAAACAATGAGTGCTTATACAAattcattacacgttttttt
ttttataaggaaccttaactttgctctgagcctggagttccttattttta
cagagaatttcagtctcaaagttccttatcgagttccttactNNNNNNNN
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NNNNNNNNttattctcagcctgagcagttccttaacaattccttattttt
tgaaccattttcagcctcgagttccttataaacgtgttccttataaaaaa
aaaacgtgtattcagatgatggttaaaagataaaaaaattactgTATAAC
TTTTCCTAACCATAAAACTGAAGAAAATCAATGTTTAGCTTTGCGGCCCT
AGTACTCGCCAATTTAAAATCTTGTTGTTCTTGTACCGGTGTCACACAAA
AATTTAACTCCCCTAAATAATGACTCCCCAGTCATAATAAACTAATAAAT
AGTGACTCCCCACCTCAAAATAAACTAGTAAATGAAGACTCCCTAGAGNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTAGAATCAATAAATGA
TCCCATTACTAGGTGATTTCTGTTTCAAAATGTATCTGAGATAAAAACTC
TGTTGTGCAGGTGTGGTGGTTATCATTTTTCTAGCCTGGAGAGTGCCAAT
TTTCTTCATTAAGAAACTTTTGCCTGCGTACCTAGATTTATCTAATGAGG
TGTAGTTTGTTGTACTTTTGGACTCAGTTTGAATTGACAACGCACGTTAA
ATCTTCCTCATTTACTTTCATTTGATGTTATGTATTGAGAAGACACCCTG
CCACAGATTTTTGCAAACAGCCAACTACAGTTCGGTcaatgcccgggggg
ggggtacttaggcaagtgaagggtacgggtatATTTTTTTTCCTAAGTAT
TCCTTGATTTATTCCAAAGGAACGTGAACATTTCGTTCGGCCATTTTTAA
ACAAGTTAGCAAACACATGTTTTGATTcgaggctcggaaaacacgagtta
aaaaacacgagttaaaaaacacgagttgcaaaaaacacgagttacgttaa
atgtgacgtcatcaatgggatattatgacgtcacaagtagataatttaac
tcgtcaatttatggtgcaccataatcttacgagttaattaactcgtcaat
ttatggtacaccttaatcttacgagttaattaactcgtcaatttatggtg
caccttaaactgacgagttaattaactcgtaagattaaggtgtaccataa
attgacgagataattaactcgtaagattaaggtgtaccataaattgacga
gataattaactcgtaagattaaggtgtaccataaattgacgagataatta
actcgtaagattaaggtgtaccataaattgacgagataattaactcgtaa
gattaaggtgtaccataaattgacgagataattaactcgtaagattaagg
tgtaccataaattgacgagataattaactcgtaagattaaggtgtaccat
aaattgacgagataattaactcgtaagattaaggtgtaccataaattgac
gagataattaactcgtaagattaaggtgtaccataaattgacgagataat
taactcgtaagattaaggtgtaccataaattgacgagataattaactcgt
aagattaaggtgtaccataaattgacgagataattaactcgtaagattaa
ggtgtaccataaattgacgagataattaactcgtaagattaaggtgtacc
ataaattgacgagataattaactcgtaagattaaggtgtaccataaattg
acgagataattaactcgtaagattaaggtgtaccataaattgacgagata
attaactcgtaagattaaggtgtaccataaattgacgagataattaactc
gtaagattaaggtgtaccataaattgacgagataattaactcgtaagatt
aaggtgtaccataaattgacgagataattaactcgtaagattaaggtgta
ccataaattgacgagataattaactcgtaagattaaggtgtaccataaat
tgacgagataattaactcgtaagattaaggtgtaccataaattgacgaga
taattaactcgtaagattaaggtgtaccataaattgacgagataattaac
tcgtaagattatggtgcaccataaactgacgagttaaattatctacttgt
gacgtcataatttcccattgatgacgtcacatttaacgtaactcgtgctt
tttgtaactcgtgttttttaactcgtgttttttaactcgtgttttccgag
cctctTTTGATTCCCGTCCAAATctctcaaaacattcgaaacatTCGATC
GAACagcactgcaatgacttcagttCTTTGGGGGGGGGTCATGATAAACT
AGTTTATCTTGACTCCCTCGGCTTATTTACGGGGAGTCATGATTTACTAA
GGGAGTCAATATTTCCTAGGAGATTTCTACTCTAAGGGAGTCATTATTTC
CTAGTTCATTTTAAccggggggggggtcaacatttacaGGGAGTTAAAAT
AATCCGCTACACcgggtgcaccacaaaaaagtttccctctttgaaattaa
ttttctcgaaatctaaaaattttaaaagaaccattcctatttcgttggaa
agaagaaagataaacttaaattttgataggtcttttattaatttcgattc
attagatcaaaagttatgcgcaattgaataaaaaagttactttcagaaag
tgctcgaaaacgttaaaaatcgacctatcaaatttttattttaaatttgg
caattacaatagcctttacatgattaagagtaTTTTTCAATAACTAAACA
CGTAAATGTTGAAaatgaagggtcgaaagggtttaaaatcttcatcaaaa
tcaatttaatttacttttaccaaaattttcctcAGGTTTTTGGtactaga
ctggataaagtctatgttaGACTGGATAAAGTATATGTAagactggatct
acctcgaaacccatttttgatgtattttaatgaattttaccagatttttt
ggcttttttcgacaaattttcttcttttcattgaaattcaatctttcttt
ataataacaaaaggtcatttagacagctaattatcatttttaaattactg
aaacgaaaatattgatgtatcatgtaattgcttctgtttaatttgatagg
tcgatttttaacgtttttgagcactttccgaaggtaacttttttattcaa
ttgagcataacttttgatctaatgaatcgaatttgatAAAGGACCcatta
aattttaagtttatctttcttcttttcaatgaaagaagaattgttctttt
aaaatgtttagatttctagaaaattagttttaaagagagaaaccttTTTG
TGGCACACCCAGTACATCAGATTGAATTGTTACATCTGAAAAAATGCAAG
TGCACAGACTGGAAACGTCTGTTTTGCGCTGTCAATTATTTTCAGTGAAA
TCTAAAGAACATAGCTAAATTTCCaattctaaattttttatgaacaattt
gaaatacaaAACTTTGTTTGAATAAGTTGCACTTTTTTCCTACAAAGCGT
CTCAACTACGAACGGACtacgaaatcaaaaaaaaagaaaaactataaACG
ATAGCACCAAATTTATCAaccctttaattttgaaatttcgcatttttcat
tttttatagctTATCCAAATCTGTCGGCAGAAAGCATATCCTCgtctttt
tctgagctccagaGACGTCCGACTTCCATAACCGAGTTTCCGTCTCTAGC
AGCAACATCAATGAAATCCCTACAAGTGACGTCGTCAATCCAGTCCATGA
TATCAATATCAGTTCTACCAACACCCTCGTCAGCAATAGATCTGCCAAGT
TCATCGTCAATTTATGTTCAACCAGAAAATTGTACCGGCTGTAAGTGTGC
TTGAACCTTTTCATATCCCATATCACAGCCATGGAGCTCCCCTGCCAACC
GGTGAATATACAATTTCTGTTTTACTACATTGTTTTCCTTAAGCGATTTG
CATTCTAAATCCACAATGTATCAATCCGCTTGGTTGcgagtcactgagac
agggtgtcttttcattttaaattaggtggtaatttaagaggttaagtttt
agtttaacttttatttcgtTACGACGCCACGCCCTTTTGCGTATCTAGCT
AGAGTAGCTTTGGTAGGCCGTCCGCCCATAGTACGCGCCCGTCGCATTTG
CTCCTTTCGGTAGAATCTATATTGGTGGTTTAGCGCTATGACTTCGAGCA
ATGTTCCATTCGCAAAGAAGCTCATCTTACAGCGAAGAcagagaaaatta
ttatttttttgttgaatcTTCCAATATCTCTCAAGGCAGGCTCAAAACTA
TCATTGTTACTAAACGTAGAGAGATTTAGAGTATGAACATTCATGGATAT
AAATGTAGTTTGTGCAGTGAAGCGTACAATTTTCGTAGCACACGAAACGA
AATGAGACAACATTCAAACAGTAACTTCTTTTTGGAAAAACTGTATGAAA
CAAACCATCAAGATATTATCAAGTATAACAATATCTGCAACTAAATTTGG
CAAAGGAGATGGGCGGTGATGAAATGTTGGGTCGAGGTGATTGTTGCTGG
TTTTTGGAGATGATGGCCAAGGGGATTGTCGCTGGTTTTGGAGAGGTTGA
CCAAGAGGATTGTCGCTGGTATTGGGAGATGTTGACCAAGGGGATTGTCG
CTGGTATTgggagatgttggccaaggGGATTGTCGTTGGTCGATTGGAGG
ATTGGGACCATTGGGGAGGCTGACATAGCTTTGTATGGTCCCAGGTTATC
ATTTTGTTTAAATACTTTAAGAGAATGCTAAAGTTCAGTCACTTGGAACA
AGGTGGAACAAGAAGAAGCAAGCCATATggataaaaaactttcaatatga
TTGGTATGAACTCTACAAGATGTTTGATTGTTTGCATTTTGGATGGAATG
TAACATATTTTATTTGGAATTAGGTTTTGCCTAATTTTTGGTGTTATGCA
AGGGGCTCCCAAAAATAGGaacaattttattatatttCGCGATTTTAGTT
GAGGGTACAATCAGGGTTGAAATATATTGGGacttttggttaattcctcg
ttttcagcaatttaaagttcgggcgaaaaatTGGGCAAATTGATAAttta
attcgaatatttcaattcgggaggggtttatagacttccaggctatattc
ttagCAATATTGGATcattcttggacttttagtTCCGCagatcctaagtc
ttaagtctagccatgaacatataaacgactggaagtgtgtctttgaagcg
agcttcgttgccgcctgtattttaaatttattccgtcataattctatttc
tttgaattacttactttaagtggataaattttggcggggattaaattttg
cgaatttgTGAATTTtgccaattcgccaaattaaatcccccccaaattta
acaaaaagacaattatgtgaaaaatcacaactttttagtatattttgagt
aattttcacccatttcagtgtgacaaaatttccaattcgccaaattatat
ccccgccaaattttacgaaattgatctatcgccaaattaaatccccagtC
GCAGTAAGCAAAGTATTCCCCtgaggtatatcatcaaaatccattgattc
attttatgtttttaagggcatactggagaagtgggacgtgggacggtggg
acgctcaggtgggacgctcgagtgggacgctcaggtgggacgctaaggtg
ggacggtagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNactaccgtcccaccttagcgtcccactaccgtcccactt
gagcgtcccacctgagcgtcccaccgtcccacgtcccacttctccagtat
gccgtTTTTAAGAGGCGGCAACGAAACTAGCactgttatcttcaaaaata
caaaggagatggatgtccagtcgtttatatgttcatggtctAGCGTTATA
acttagagttaaaactctaccaatccaacctaatttagagcgcttccgaa
tcattttttttttctatgaattccttttatggtagagtaCCTTTCTGCCA
AGTTTCAAGTCCGTAGCAGCCCTACATCTAAAGTTATGCAAGGGTGGttg
aaaacaataacaataattgccccgcaggggcttttgttgcttcacgtagc
ggacttgctcgtcagaaaaaacaaacccccccccctgagaaAAAGAACCC
CCGAAAAGcttgataataatagggtttaCCAGCAGGCTCCtccaaagtct
aaaaaagttgaaatttaaaCACTgttttttgtacataatttcAAGTCAAT
CGGGTAAAATTATTGTTTGAGGGACCTATCTAGAACATATTTTTATTAGA
TAACCGATGCATGCAGGATTTTAAAGCCGGTTATAATCTAATGGAGGGCT
GTATATAATTATGACtcatattattattgttattattttccaGTTTCTAT
TCCATGTGGTCCACAATTTGGAGATCAATTTGTACAAGCTGGTGACGATG
TTGCGACTTGCTTTTcatctttttcgaaaaaattcccATTATTCTCAAGA
GTTAACAGATCGAAAATTTGTGTAAGTATCAATCAAATATAAAATGACTT
TTGTGTTAAAATCTCGAtatgtttcaaatttttaacaagtgatactttta
tggacctacctggttatgcatttaacacatatataattaaaaaacaacaa
catttaaaattagcaaaagcttttcggtctttccatcatcagtgctatag
aatagtaaaattgaaaatcaaaaaagttacaaatttatNNNNNNNNNNNN
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ATGATGGAAAgaccgaaaagcttttgctaattttaaatgttgttgttttt
tattttttatcaatatggcAAACATTGATCATaaacatatataattgata
gcgtgaccattaaacaatcattcagaacacaaatagtgacgatctattaa
aattagtcgtttgcttcttataaaaaaaacgtttagaaaccaaaatttca
tgctcttgaaatattctttcatattcaagactttgtcagcaaaaaacatc
tttctcataaaaaaattgagtaatttgactaagaacattgatgtaagctt
attaatagtgattcttatagataaacatgcgttttctgagccaacaaaat
ttttttacaaaaatctgcttgagccatcttttacctactttcatgcaaaa
aaatcagaaaaggtTAATGATCCAAaacccgttttttggcccaaatctgc
ctaactaatgagccaatcacgaggaaagctaataacgaacgaacggacga
acgaacggacaaaagTTAATTTATAAGACCTTccccccaccggggtaggt
ccaaaaagagaaaagaggctataatttaaaagcaatttaagaacaggata
agaacgtTTCAAGACTTAAAGTggcgaaaaaataagaacagcagCGCCTT
ACTTGTTCTTATTACGAAAAAAGAATGCGGCAAGTTCTCATTTTAACTAT
AAGTCTCAAACCTGACGAGTAATTTTCAATACCGTATTAGATATGCAGTA
ACGGATATATCACTTTGGACAAACTACAAAACAGTTTTAGAAAATCATTG
ACTTCTGGCTATCCATCAGTCCTGATCCCATTTAATTACGATATGATAAG
TCTTGGTAACAACATTCTGTACCGTACCACAAAAGATCAAAATATATTGA
ACCTTGTTGACAGAGATATCTCACTTTCAAAATCTGTGTCGTCCTTCAAA
TCAAAAGAAGCAATCGTTGTTACTTTTAATAACGTTCCCCATTACGGTAA
TCGAAACATGATATTCCGTTATCAAGTTGTTATAGCTACTGATTACAAAA
ACACATACACTATCTTCAATTACGATCGAATGGATAATTCCGGCTATGAC
AATATTGGTTACGCTGAACCAGATGGAGAGGTCTCTTGCACACCATACAA
ACGTTTTAACCTCAATGGACACACACTGACAACATCTTCCAACGTTGGTA
AACCTGGAAAATTTATCTTCTTGCTAACTAATTGCACGAATGACAGAGGT
AAGATGTGAAAACACAATTGAAAAGTTTCGATAAAAAAAGAACCAAACGA
TCTCTGAAAAAAGTGTTCTGCACACAATGTTATCATTAGTAGGCCCTACT
GGtaacaaattttatgaaaattgttaAAACATATAGTAAAAACCTAAGCT
TTAAGCTAAGGGTCAAATTTGAtgctttgttccaaatttgAACGATAATT
ACATCAATCCGGCCTACTACATTGCAGAATCATAGTTATAGTTTGAAATA
TTTAGTTTCTTTTATATAGTTTTACCAACAACGACACCTTTGTTAACCAC
GACACCAGCAGCACGAACAAATTCATCTGAAAAGATGGTAAAGTTAGAAT
GTCACTCCAATGGTTTCGAAGCTGGATTCAATTTAAAACGATTATCAGca
acgatggtaccctactctATCAGGTTTTCTGGTAACAATAATTGCAGCTC
AGTTGATAAGACTTCCGTAGGTCAGATCAGAAACGGAAGACTTTGGATCG
GCTCAAACTATACTCAATGTGGAATACAAACATCCTACAGTGGTGACAAT
ATTATATTTGAACAAAAGCTAATCGTAAGTTATGGATCCAAAAATCAACC
ACGACTTGTTTATAGATCACCTACGAGGTATTCGTACAGATTCAAATGCA
TTTTGAACAGAAATATCAACTCAAAATTGAACATGGATGTGGAAGATAAA
TTTCAAGACATCGAAGAGATTAGTAAGTGTTAATTTTTAAGCCATTACAG
CCTAACATCAATGAGTATAATGGTTGAACAGCTATTGTTCTCGATTGTTT
GATGATTCTGCACAGTCAGGGTTAAGGCACCCAACCCCCGTAGGTGCTGC
GGCTTTTCAATAGTGAATTTACCTTCGCCCAGGTTAACCCATACCATTTA
GAGGAAGTAAGACTTTTTAATCTAATGCAAGGGTGTTGATATGTAGGCCA
GTCTTTTTATTTGGAGTGGAACGTACTCAAGCTCTTCCGAAGAGCAATAA
AGGTTCATTAGACCTCCCTGTCATAGAAAAGGCGATTATCTCAGGACGCA
AGCAATCGACAGAAGGTAAAGTCATCCTTCAAACTTGCATCCGCAAGGTT
ATGCTTTTCTACAGGAGTCGATACAAACTACAAGGGTGTTTGTTGAAATT
GTTGTGAAAAATAACAGTCAATTAATCAATAACGTAAAAAATTAGTGTCG
TAATTTACTTCATATAATTTTAGACGGAACATCCAATTTTCAACTGGAAT
TGAAAATGACTCGACCAGACAGCGACAAAGAACAACAAATGGTCACTATT
GGAGATCGTTTACGATTCACTTTAAACCTCCCAAACGCTCCACAGAATGT
GAAAACTTCACCTCAAAATTGTTACACAACTAGAATAGATGGAAGCGGAA
GATATAATTTGATTTCAAACAGGTACAAAGTTCaatgttttatttaaaaa
ctcaaaTGGCGAGCACAAAATCAAACTTGACATAGAATAAAATaatctta
aattttcaaattttatccaGCACTTTACATAAAAGAATTTTAAACTAATG
GtctgaaacaataaaaattctaTCATCAAGTAACACAATTAACAGTTCGG
CTAGCCTATCTCTATCTCAACACGCGATGTTTTTATCACGGTGTTGTgaa
aaaagccgtggtcgtctggtacaaGCAACAGTTGGACAAGCTCATCATAA
TTCTTCAAGACAGACTTTACTGATAAGACTTTAATATCTAATCTTCATCT
CATATCTCATATTTTACTAATAAACTTTTCAATCCGACCTTAAATCACAT
CCTCATTTTCTTTATCATTTTGCAGATGCGTTAGTCCGAATGTCAAGGAA
ACAACTGTCATCACTTCACTGGCAACTTCTCTTCATCAATTTTCGTGGGA
ATTATCAGCATTCCGTTACTTCGGTGATTCAAACACTGTTGTGATCGTGT
GTGAAGTTTTAGTTTGTAAAAACGATGCATTTTGGAGGTTGAGTGAAGAA
TGCAAAAGATGTGGGCAAACTTCCAATAGAAGAAAACGAAGGGAAAATGA
AGAGGAGGAAAACCAGTCTGTTGTTCTACAGAAAAGAACAGTTTCTTCAG
AACCAATCTATATCATTGAAAAGTCACAGAGACAAGGTACAGTAGAggaa
aatttccatttttccaattAGTGTTACAAAATTGTGTATTGTGAAACTGC
TATGGttgttctttcaaatttttctctATAAGCCACTAAAAGATTTCCAT
TTAAGACTCCGAACTTGATTTTCTCTGAAACGCCATAGATCTGTTCAATT
AGTgtgcaaatttgaaattcaTGCCAACTGGGTTCCGCACtataatattg
ttttttttcaatttgataaGAACCATCATTCTAGCTAAGTTCCAGGATTG
TTGACTGATGACAACTGACTGTCGCTTtaataaaggaagaaattttggcg
gtaaGAAAATTCGGTGGGTTTAGCGGAAAAAGTCCGCAAAATTCAATTCC
TGCTGAAATTAACTTTTGCCTTCAAATTTTCGAGCAATCCGTCAAATTAg
atttaaatcaaaaaattttttggatcACACCAAATTGAATTccagccaaa
atttctttccttgaagtagtttttaaatatgaaaattttaaaacaaccaT
CGTTGAAATTTCTTTCTAGAACAAAAAgtacgtcaaaaagacaatggAGC
GATACCGAAACCAACTGGCATAGCAATCATTGCAATTTTGGCAACTATCG
TCCTCGTTGTGGGTGCAGTTCTAGTCAAGAAAAGATTGTGAATTGAAGTG
AATACAATTTAAGaaagttcactttttttttcatcaaaatatttttttta
gggaatttattttgaaacagAGGAGAAGGATAGAATGTAAAATTAAATAA
AGTACGGTCTCTCACTCACATACCTTATCACATTGTTCAGATGTTgtcta
aaatgaaataaacataAGAAATGCATTCatacagtggtcaaagcaaagaT
TTCGTCTGAGACGAAGAAAAGCAAAGGCGAAGACGAAGAATGGATTATAC
ACAGCAAATTGGCAGATATTCCTAAAAATTTGGTGAATCAAGCAGAATTT
TGAGATGGAAAAGCCACTTTATATACTTCACTGAGACGGAAAGTCGTCTG
CTTTTATACAAATAAACGCCCGGTTATTATAActtaattttgtttttaga
aagaaTACCACTAAAATGTACGACCCTTGCAATTGAGATCCTCTTTGCAC
GTTCACCAACACTTTTCCGAGAATCAAGTCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045257XLOC_045257Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072958-exon-scaffold_86-1491911889:1258325..1258446TCONS_00072958-exon-scaffold_86-1491911889:1258325..1258446Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1510915933:1258325..1258446TCONS_00072958-exon-scaffold_86-1510915933:1258325..1258446Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1575043694:1258325..1258446TCONS_00072958-exon-scaffold_86-1575043694:1258325..1258446Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1491911889:1262684..1262914TCONS_00072958-exon-scaffold_86-1491911889:1262684..1262914Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1510915933:1262684..1262914TCONS_00072958-exon-scaffold_86-1510915933:1262684..1262914Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1575043694:1262684..1262914TCONS_00072958-exon-scaffold_86-1575043694:1262684..1262914Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1491911889:1267818..1267945TCONS_00072958-exon-scaffold_86-1491911889:1267818..1267945Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1510915933:1267818..1267945TCONS_00072958-exon-scaffold_86-1510915933:1267818..1267945Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1575043694:1267818..1267945TCONS_00072958-exon-scaffold_86-1575043694:1267818..1267945Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1491911889:1272965..1273472TCONS_00072958-exon-scaffold_86-1491911889:1272965..1273472Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1510915933:1272965..1273472TCONS_00072958-exon-scaffold_86-1510915933:1272965..1273472Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1575043694:1272965..1273472TCONS_00072958-exon-scaffold_86-1575043694:1272965..1273472Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1491911889:1273744..1274196TCONS_00072958-exon-scaffold_86-1491911889:1273744..1274196Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1510915933:1273744..1274196TCONS_00072958-exon-scaffold_86-1510915933:1273744..1274196Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1575043694:1273744..1274196TCONS_00072958-exon-scaffold_86-1575043694:1273744..1274196Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1491911889:1274698..1274896TCONS_00072958-exon-scaffold_86-1491911889:1274698..1274896Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1510915933:1274698..1274896TCONS_00072958-exon-scaffold_86-1510915933:1274698..1274896Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1575043694:1274698..1274896TCONS_00072958-exon-scaffold_86-1575043694:1274698..1274896Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1491911889:1275300..1275610TCONS_00072958-exon-scaffold_86-1491911889:1275300..1275610Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1510915933:1275300..1275610TCONS_00072958-exon-scaffold_86-1510915933:1275300..1275610Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1575043694:1275300..1275610TCONS_00072958-exon-scaffold_86-1575043694:1275300..1275610Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1491911889:1276144..1276756TCONS_00072958-exon-scaffold_86-1491911889:1276144..1276756Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1510915933:1276144..1276756TCONS_00072958-exon-scaffold_86-1510915933:1276144..1276756Clytia hemisphaericaexon
TCONS_00072958-exon-scaffold_86-1575043694:1276144..1276756TCONS_00072958-exon-scaffold_86-1575043694:1276144..1276756Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1258325..1276756 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0438956	0.0398742	0.121853	0.0492813	0	0.0632411	0.191281	0.144997	0.144658	0.101212	0.897954	0.0415736	3.21076	2.65067	1.04372	2.36915	0.286852	0.410518	1.63487	1.33334	0.703132	0.630591	0.303604	0.631457	15.712	18.8506	0.0712117	0	0.62197	1.03156
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072958 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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