TCONS_00072949 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072949
Unique NameTCONS_00072949
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5096

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072949 ID=TCONS_00072949|Name=TCONS_00072949|organism=Clytia hemisphaerica|type=transcript|length=5096bp
CTTTCCTTACTTCGACAGAAGCGCAACGAACTGCCAGCCATGTGACTGAT
CTTACGCCGACACAATAACATAACATTTTTTGGGAAAGGGTCACTATCAC
ACATATCAAGAATGCATTGGGTAGCATTTTCATTACTTTTCATAACTTTA
TTCACAGCTACAAATGCGTTTCCGACGGTCAAGAAACATAACTACCGATG
GACTTCATGGTCAGGTTGGACTCCTTGCGAGGAGGAAGAAACTGTCGACT
GGGCTCGCACATCGTCTAGAACTGACAGACCAGAAAAGCCGATATATCGG
AATTGTTATACGAGAGCTACGCGACGGTGTATGAATCCTCCTTTTGGACT
GACACACGACGCGAATTGTATAGGAGAGAGTGCTAAAATCGAACTCTGTG
ATCTTGAATTCAATTCGGATTTAAGATGCAGAGCCATTGTCTCAACATTT
CAAGCCAAAGCTCGTATACTCGATGGAGAGCTATCAACTCGTACCCTTAT
TGATCAGAAGCTTGTTCATTTACGAcaggaaaattttaaatatttgatcA
CAACCATTGCTGGTTCGGTGTTGGTTTTTTGCCTGTATACGCTGTTATAT
TTGAGACTTTTGAGACACAAaTTATTTGGATCCAATTACGATGATAAGTT
TGAACCGAGTCCACTTAAAAGATCATTTGATAAGCTCAAAGCTAAAACTA
CGGAAAGTGCTGATAAACtactcaaaaatttcaaaaagtccgACCCCAAC
GTTAACAAGGAAGAAAATAACTCTTTATTCGATAAAGATGGAAAATTGGT
TAAGAATAGACCAATTGAAGATGGTCTCGGCTCCACCCCGCCGATGCCGA
CGCGAACTGAGTACGAACAAAGCCAAAACAAAGACTCCCAATATGTTCAA
AGTAAATTTTTGGAACATCATATGGGTATCCAACAAGGAATTCAAAAGAA
ACAAGATCTCCAAAACGAGACTCTGGTTAAAAAAACTAGCCCAACATCTT
CGATTCCGACTAAAGAAAACTCACCACAGGCTGCTCAAGTAACTACCCCA
CAAAAACAATCACAGCCACAGTCCCAGCCACAACCACAAAAACAACCACA
ACTGCAGTCCCAGCCACAACCGCAAAAACAGCCCCAACCACAGTCCCAGC
AACAGCCGCAAAAACAGCCACAGCCACAACCACAAAAACAGCCACAACCA
CAGTCTCAGCCACAACCACAAAAACAGCCACAACCACAGTCCCAACCACA
GCCGCAAAAACAGCCACAATCACAGTCCCAGCCACAACCGCAGTCCCAAC
CACAGCCGCAAAAACAGCCACAATCACAGTCCCAGCCACAACCGCAGTCC
CAGCCACAATTGCAAAAACAGCCACAACCACAGTCTCAGCCACAATTGCA
AAAACAACCACAACCACAGTCTCAGCCACAATTGCAAAAACAGCCACAAC
CACAGTCCCAGCCACAATTGCAAAAACAGCCACAACCACAGTCTCAGCCA
CAATTGCAAAAACAGCCACAACCACAGTCCCAGCCACAATTGCAAAAACA
GCCACAACCACAGTCTCAGCCACAATTGCAAAAACAGCCACAGCCACAGT
CGCAGCCACAACTACAAAAACAGCCACAACCACAGTCTCAGCCACAATTG
CAAAAACAGCCACAACCTCAGTCTCAGCCACAATTGCAAAAACAGCCACA
ACCACAGTCCCAGCCACAAACGCAGTCCCAGCCACAACCACAAAAACAGC
CACAACAACAGTCCCAACCACAACCACAAAAACAGCCACAACAACAGTCC
CAACCACAaccacaaccacaacaacaGTCCCAACCACAACCACAAAAACA
ACCACAACAACAGTCCCAACAACAACCACAAAGACAGCCACAACCGCAGT
CCCAGCCACAACCACAAAAACAGGGACAACAACAGTCCCAACCACAACCA
CAAAGACAGCCACAACCGCAGTCCCAGCCTCAAAAACAGCCACAGCCACA
GTCCCAACCACAACCACAAAAACAACCACTACAACAGTCCCAACCTCAAC
CACAAAGACAGCCACAACCGCAGTCCCAGCCTCAAAAACAGCCACAGCCA
CAACAATCACCTCAACCGCAAGGATTAGTTAAGATACCAGGACCACCAAA
CGATACTCAACctaaaaaatcaaccaaccaaaaacaaaatttggacaatC
CACAAAAATCATTCAACGACTTGGATGGTGTACGGAGGTCATCTCATTAC
GTAAATCTAGTTGGACGACCATCAGCCACTGAAACTGCTAAAAGTTTATT
TACTTCTCGTTCTCGATCTATGATGTCCAGACAAACAGTCGGCAGATGCG
AAATCAGCCAACTAACCTTCAATCCTGATGCAACTCCACCCAAACAAATG
AGTTTTCCTGAATCCTCCTTGGTTCAATTGAAATCACCAATTCGTAGCCA
ACAAATTACATCAACCTCATCTCTACTGAGTAGTATCACAGAACACAAGA
TTACTAAATCATCATCACTCATAAAACCAAGCAGCCAAGCTTTTCAAATT
CCTAATCCATTGGCCAAACCAGTTTCCGAACATATTTCTGTAGAAAGCCA
CCAGATAACTGAAGCTTCCTCACCATACAATATTGATTCCTCACGACAAT
CTCATAAACGCCAAGGGCGTTATAGTTCGTCATCATCTACAGGAAGTAGC
AACGATTATTATGATATCCAAGAAACGCCTAAGTCTTCATTGCCGCCCTC
AAATTACAATCTGAGACAGAGCGTTCGCGGATCACCAAAACATCTGACCG
ATTCTTCCGGTAGTGACGAAAACGattctttaaaattgaaatctCGACAA
GCCAGTAAAGAACAGCATAGCCAATATTTCAACCAAAGTCGACAAACTAG
CCAGCACCACCAAAGTCCTGCTGTTGGTTACAACTCCAATCCATACCAAG
ATCAAACGACGCCATCACATGGGAACCTGAAAAATACTCCAAGATTGAGT
atgaagaaaattattattaataCTACTAGTAACCAGGAGCCACCAAATAA
CTCTATTGAAGAGTATTACATGGAGCAAGGTGGGAATTACATATCACCCA
ACGCCAGTATGAGGAATTTCAACAAGCTATGTACCAGAGCTTCTAAATAC
GAACGAGTTCGTTCAGATAGCTCACCATCAGAAGAAACGGACTGGGATGA
ACCTAAAAAACCAATTAGATCTGTAAGCCATTGTGATATAGTACTTGAAC
CATCACCACAACCGTCTTTAATGGATGCACAGAATGTGGAATCACACCAA
CACAGTGATGCATCCCCATTGGTAAGCCGCTACATGGGTCTTGGTAAGCC
CTCAAACCAAGCCCTAAAAAGTGGAGGTGAAAGTCAGATGGTTGTAGCTG
GACCTAAACCATCAGCATCTCATCATAACCTTGACCTTCAGGAGATGAAT
CAAAATTACCAAACTTATTCATCGACTAGAATCAATTCTGAAAATCATAT
GGAGGATCCCCAATGTAGTGGAAACGTTAGTAAACTCATACTTTCACACG
AACAATTCCAAGCCAGTAATAACGTATCGACTAACAGTTTTAATGCTTAT
CATCAGGGTGCTACGAATTTGTCAAATGTACCATCTAGTCAGCCCTCACA
CAATTCGCAGCATCATCAAATGATATATTCGAGTGACCCTTACAGACACT
CGCAGATCCATCCATATTCTACAAATGTATCAAGGACGTCTAACCATCCC
TCATATTCGAATAGACCATCATACCAACAGACTACAAATTCATTTCAGAT
CACATCCAGCCAACCTTCGCAAAATCTTCAGTTCACACACTCCAATGAAG
CCAATAGATCTTCACAATCTTCACAACAAATATTTCATATGCTTAAAAGT
GAAACCAATGTGATCACATCACGTCCATCTGCTACCAACACTGCCAAAAG
TTTATTTCACAATCGTTCAAAGTCTCAACTATCCAGAAATTTACACAACA
GTTCACAACACCAACAATGGTCTGCAAATCCTTCTCCTGTAGCCTCAAAC
CAAGCTTCGCATAATGCTTCACATCAACAAGCAATGTTTTCAAACAGTGC
CCACAGACCATCAAATAGCCAACACAAAATGTATCACCAAACGATTCCAG
TGGGTCCAGCACATGGTCCATCTCACTCTTATTTATCAGAACACAAGCTT
CTACAAGAGGATTTTCTATCTACAGAATTATTCAGACATCCTATATTTGA
TACCAACCAGAATAGCCAGGACGCAACATATGTCAACATTGACACGCTGG
CAGCAACAAGACCCAAAAGCCCTAGAGCCTCTAATCGTGTATTGTCAGGA
GCAACAGCTAATGAATCACCGAGTCAACAAAACGCAGTACCTGCTTTTAT
ATTCATCTCACCATCATCTGCTAAGGTTGCTGGAAACTGCAGTCGCCAAC
CTAGCCAAGAGTTTTTATCAAGCTCAATCACCAGTATTGTATCCAGTCGA
TTGGAAGAAGAGATGCAGGAGTTTGATTCTGATCATCAAATAACACCACA
AAAAGTCCATAACTATCAGAATAAGAATCCCAAATCCACGGAAATGAACA
GTGGAAAAGAACAACACACTACATTGACTCAACCGACATTTGGCATGGTA
ACTCGATCGCGTTCTAAGATCAACCAAGAGGAACCCAAGACGCCAGAAGT
TATTAAAAAGACTAAGGACCCCAGAACAGTCCAACAAGAACCGGTTGAGC
CTAAATCACCAAAGACTCCCAATAATAAAAAACCAAAAGCTAACGAATTT
ACATTCGAAAACGATGATAATAAGAACGAACCGAAATCTTCCgttaaagg
aaaaaagaaaacgttGAAGAAGACGAGAGATACGTTAGCGCTTGGAACAC
AATTGGATGTCGGTGGATCAAGCTCAAATGTCATTATGACACGAAGTATG
TCCAAACGGCTCAACACCAATAACCCAACTGAATGAGTTACCccaaataa
acattttttttgatgCTGGTcatcaattttatattttatttattttttct
ttttctcttatTATTGTTGCTtccttttcttgatttttattacgaa
Run BLAST on NCBI

transcript from alignment at scaffold_86:1208228..1219791+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072949 ID=TCONS_00072949|Name=TCONS_00072949|organism=Clytia hemisphaerica|type=transcript|length=11564bp|location=Sequence derived from alignment at scaffold_86:1208228..1219791+ (Clytia hemisphaerica)
CTTTCCTTACTTCGACAGAAGCGCAACGAACTGCCAGCCATGTGACTGAT
CTTACGCCGACACAATAACATAACATTTTTTGGGAAAGGGTCACTATCAC
ACATATCAAGAATGCATTGGGTAGCATTTTCATTACTTTTCATAACTTTA
TTCACAGGTAAGAACAATTTCTTTTATAATTTTAAGAAACTTTTAGAAAA
CTTAACATATTTTTTCTAAGATCTGATTTTGACTGCCTAACATTTTAGCA
AGTAAACTAAGGTAGTGAGGACCattaaaacttttacaaaggGGATTGTT
TTCTGTAAGAAGAAGCCAGAAAGAAGAATCTACACCCGCTGCACTGATTA
AGTATTCAAATTCTATCGGTTTCTACAAAATTAGTATGCTGTACTAGCCT
GCAACGAATGTTAGCAGTACACTTGATAATTCTTAGCTTTGATCACTAAA
AGGTTTGTATTTTTCACAGCCGTAGAGGTTTATGGGTTAACATTCTCTTG
ACAAACACATAAAAACTTGTATTGTGCATAGCAACAGGATTGTGAAAGTA
ATTTGTCTATCCATGGCTATTAGATTATTCGCTACAGCTATAGATAAACT
TTTAACGATGAAAAACAATGGTTGGATCTTAAGGAaaggtttttattttc
aaatatggGTTAACTGAGCTAACTGGGACACATCCAACATGTCTTTAAAG
ACTGTGCTAAGTTTTTGGCCCTTGATGAAGCTAATTGGATAAATTATCAT
AAGCTATTCGAAGTCCCGTACGGACTTATGGCTTTCGAAAGCTTTTGCGG
TCCgtagttttatttatttctaaccTTTATTGATCTTTGTCGAGTCTATT
TGCTTTTTCTACAAGCTATGAAAAGTTTTAACCCCNgttttatttatttc
taaccTTTATCGATCTTTGTCGAGTCTATTTGCTTTTTCTACAAGCTATG
AAAAGTTTTAACCCCGTAAAGAGAATAATTTCAGGGAATGGCCATGTTCG
AGGCTCCTAACGGTCTTATgatttcttaaaaactttattggttcatattt
atttatttctagccTATAAACATCGGTCTTTCTCTTGCCCTTTTCTTTAC
TTGTTACTCTTCTTGTGTTGTTTTGAATCAATGACTTAACTTTGAAGATA
GTTTAGGATCTAAAGGTATCTGACAATAACGCACTGGCTACTTTAGCGCC
TGTTTGACTCTTCTTAGGCTAGTTTTAGACTTATGAACCCTACATTTGCA
CCTTTGATTTTATGGGACCCTTGCAGTTTGTGTTTTATCGCCCTTATTCA
GGTTTTATGTCATCCATTCGTCTTTTATCTTTTTCCAGGTCTCTGTAAAC
TTACTTTAAAACATAAGAAGTGTAAGTTGGGCTTTTTGAAATACCAAAGG
GAACTCTAGTTTGATCTCAATTGTATACATTAGCGatttaaggttttgtt
ttttagcCTTAACCAAAATATGTTGACCTGTTGTTATTAAATACATAAAA
CGGTACATATTAATAGAGCTGCCGCTCTTATAAGGTTGTCAAGGCTTTGA
TTCGAACATGTTAGGGAAATATATATCGTTAGCGCTTCCTTAGCCACGAT
ATTAATGGTCTGGTTACTCCCTAGATCGTGCCAGGCCTCAACTTTTGTGA
TTAAATCCAGTTAATCATGAAAGTCTTATGCTAATTTGTTTATGTAGTTG
CCAGATAAATTATTTACCCGCGCTTGAGTTAGACCTGACGAATTTAACAT
CTCCTAATCTTCAGGTTCTTTATTGGGGAAAGATAGTCAGGATTTATCTT
AATCGGAGAGAATTTTGTTCTGGGAAAGATATTATCGCtcagtcaaaatt
tttttctagcgtgaaattgataaaaagaaatgATCTAAAAAGAATTAGTA
ACCTCTCCTTCCAAGGTTGAATATTTTGAAGGTAGCCATCGTTAAGTTTT
TACGACAAACATTTTTGGGGAGCATGTATaacaaatgaataaataaacac
TTTCTTCTACTTTTATAGCAGCTACAAATGCGTTTCCGACGGTCAAGAAA
CATAACTACCGATGGACTTCATGGTCAGGTTGGACTCCTTGCGAGGAGGA
AGAAACTGTCGACTGGGCTCGCACATCGTCTAGAACTGACAGACCAGAAA
AGCCGATATATCGGAATTGTTATACGAGAGCTACGCGACGGTGTATGAAT
CCTCCTTTTGGACTGACACACGACGCGAATTGTATAGGAGAGAGTGCTAA
AATCGAACTCTGTGATCTTGAATTCAATTCGGATTTAAGATGCAGAGgta
tgtttaatttttttcttttttctttctgtcAAAATGTTTTATAGACCTCT
TGTAGATGTAGCAAGCTTTACTCGGCTAGGAAGGTTCCACAAAAGACAAA
GTATAAATACTGAGTCCTGGAAAAGTCATCGACTCGTGAAATTCAAATTG
TACAGAAATGAGTACCCCTCCTCAATCAAATCTAAAACCTTTATGACTAT
TTCCCTTTTAAACAAGATGTATAGACCCAAGAAACAGACCTTCTAGTTTC
CCAAGAAACAGATAGATTTTTATTATTCTGCAGAGTTAAGTCATATTACT
GACCCGGGGGGAAGACTTTGGCAAAAATAGATGCCTGGTATGTGCGGATG
GTAAAGGGTCGGATTTTTTACCTTCCCAAGTCTTTCTGAGGgttacaaaa
aacaacaaaaattcagaacagtctctttaagggtcggGATTTCTCCCATT
TTGGGTCCTTTTAAGAGTACGAAAAAGAAACTCTCTAAGGTCAGGAAGTT
ATTCGAAACCCGTCTCCCGTAGGGTCAAAAAGGGTCGCTTTTCGGAGTTC
CGGTCAGCACATACCTGACATTCTCCAACACTAGCACCCCCCGGATTACT
GATGATGGCAAATATTACCCAATGGTTGTAACTAACTTTAGTCTTAAATG
CTTTATTAAGGATGagtttggaaaaattatttctctCTATCTCTCTATCA
GACTattatttcatccccattcgaaatttagtttaaaaattgcacttcaa
aaccatccccactgaattttttaaccttggaacaatagaatttctatccc
cattgggatttcagtAGGAATCTTAATCCCCGATGATTAATTCCATAATT
AATTCCCCCATAAttagttccaccggggctgtgagacaggggtgtaatag
aGGAAGTTGGGTTTGAGTTTCCAGGGAGCCTCATTACATCAGGCTTAGAA
ATAAGGACGTGTTTAACTCATTCGTTCTTGATTAATATATAAGATTGATA
TCAATCACAATTTCGTACCCAGAAACACTTGcacaactttttgattttgc
tgaTGAACgtgtagactagagtctacttctggctgaactttgaaCCTTTT
GTAAACGCTATCAGAATTATGAAAAACGAATTAAGGGACTCGGTTGGAGT
TTGAGtcaattgtaatttttttatttatttttgtcttcCAGCCGTTGTCT
CAACATTTCAAGCCAAAGCTCGTATACTCGATGGAGAGCTATCAACTCGT
ACCCTTATTGATCAGAAGCTTGTTCATTTACGAcaggaaaattttaaata
tttgatcACAACCATTGCTGGTTCGGTGTTGGTTTTTTGCCTGTATACGC
TGTTATATTTGAGACTTTTGAGACACAAGTAAGTTGATATTTCATTTCAT
CCCCAACTGGATGTCGATGGGCGTTACTTCTGACGCTTCTTTGCCCCGGC
TTGGTTACTGCTTTTTTCGCCCTCGATGATAAAATGATCTTTGCAGACGG
GGATAGTTGAGTTCTAGGAAATTTGCCCACGGGAAGTTTCGAACCTCGGC
AAATCACCTTCTAGAAATTCGCTCTCCAGGAACATTACACCTCTCCCTAT
GAAAAATTCACCTAAGTAGTTTCCccataaaatttgataaaaattgaaag
atttcAATAAGTCCTTTGAGTATCTTAAACTGTTCTAGGCATAATTATAT
CCGATATGTTTAATATTGACATTGATACCGAGTATTTTGATATCTTTAAA
CCATTATTGTTATCTGCATTTTGAAGACCAAGAGTTATCCATAAATAAGT
TTTATAGGCGAATTATCAAAAACCAGACCGACATTCAAGTGCAAAATCAA
AGGATAGAGTGTAGATGAAATCTCAAGTCTGTCAAAATTAGCGGGAAGTC
TTCCTGGGgaggaaaaaaatttcctagGAGCTCTGAAATCCAGGAGCTCT
GCTGTTCTAAAATTTGATTCTTAAGACTCTTACCAAATTTCATGCGATCT
TATATGAAATAGCGtggaatttgaataaaaaaaacagaaattgaCTTCAA
TCAAATAAATCTTAAATTTGCTGAAAATAACTATGAATTACATAAACAAC
GTAGGAAAGTGAATCCGCTGCACTGATTAAGTATCCGGTTTCTATCGGTT
TCTACAAAATTAGTATGCCGTACTACCCTGCGACGAATGTTAACAGTACA
CTTGAGAATTCTTAGCTTTTATCATtaaaacttttgtatttttcaaaccC
GTAGAGGTTTATGGGTTAACATTCTCTAGACAAACACATAACACTTATAC
TGCGCATATCAACAGGATCATGAAAGCAATTTTCCAATCCTTAGCTATTA
GATTTCTTTGCTACAGCTGTAGATAAACTTTTAGCGATGAAAAACAGTGG
TTGGACCTTAAGGAaaggtttttattttcaaatatggGTTAACTGAGCTA
ACTGTGACACCTCCAACATGTCTTTAAAGACTGTGCTAAGTTTTTGGCCC
TTGATGAAGCTAATTGAATAAATTTATATAAGCTATTCGAGGTCCCGTAC
AGACTTATGACTTTCGAAAGCATTTGTGGCCCATACTTTTATTCGCTAGT
TTTCCCCATTTGATAAATATTGAAAGATTTTAATAAGTCCTTTGGGTTTC
TTAAACTGTTTTAGGCATAATTATATCCGGTATGTTTGATATTGACATTG
ATACCGATGTATTTTGATATCTTTAAACCATTATTGTTATCTGCATTTTG
AAGACCAAGAGTTATCCATAAATAAGTTTTATAGGCGAAATATCAAAAAC
CAGACTGACATTCAAGTGCAAAAGCAAAGGATAGAGTGTAGATGAAATCT
CAAGTCTGTCAAAATTAGCGGGAAATCTTCCTGGGAGGAAAAAAAAACTT
CCTAGGAGCTCTGAAATCCAGGAGCTCTGCTGTTCcaaaatttgattctt
acaatcAAATAAATCTTAAATTTGCTGAAAATAGCTATGAATTACATAAA
CAACGTAGGAACCCTCTGAATTTGCGTGAAAATTACCCACAAAGagacta
aaaatcaaaatgttttgtttttcttagaTTATTTGGATCAAATTACGATG
ATAAGTTTGAACCGAGTCCACTTAAAAGATCATTTGATAAGCTCAAAGCT
AAAACTACGGAAAGTGCTGATAAACTACTCANTTCCGGTCAGCACATACC
TGACATTCTCCAACACTAGCACCCCCCGGATTACTGATGATGGCAAATAT
TACCCAATGGTTGTAACTAACTTAGTCTTAAATGCTTTATTAAGGATGag
tttggaaaaattatttctctCTATCTCTCTATCagacttttatttcatcc
ccattcgaaattcaatgtttaaaaattgcacttcaaaaccttggaacaat
agaatttctatccccattgggatttcagtAGGAATCTTAATCCCCGATGA
TTAATTCCATAATTAATTCCCCCATAAttagttccaccggggctgtgaga
caggggtgtaatagaGGAAGTTGGGTTTGAGTTTCCAGGGAGCCTCATTA
CATCAGGCTTAGAAATAAGGACGTGTTTAACTCATTCGTTCTTGATTAAT
ATATAAGATTGATATCAATCACAATTTCGTACCCAGAAACACTTGcacaa
ctttttgattttgctgaTGAACgtgtagactagagtctacttctggctga
actttgaaCCTTTTGTAAGCGCTATCAGAATTATGAAAAACGAATTAAGG
GACTCGGTTGGAGTTTGAGtcaattgtaatttttttatttatttttgtct
tcCAGCCATTGTCTCAACATTTCAAGCCAAAGCTCGTATACTCGATGGAG
AGCTATCAACTCGTACCCTTATTGATCAGAAGCTTGTTCATTTACGAcag
gaaaattttaaatatttgatcACAACCATTGCTGGTTCGGTGTTGGTTTT
TTGCCTGTATACGCTGTTATATTTGAGACTTTTGAGACACAAGTAAGTTG
ATATTTCATTTCATCCCCAACTGGATGTCGATGGGCGTTACTTCTGACGC
TTCTTTGCCCCGGCTTGGTTACTGCTTTTTTCGCCCTCGATGATAAAATG
ATCTTTGCAGACGGGGTTAGTTGAGTTCTAGGAAATTTGCCCACGGGAAG
TTTCGAACCTCGGCAAATCACCTTCTGGAAATTCGCTCTCCAGGAACATT
ACACCTCTCCCTATGAAAAATTCACCTAAGTAGTTTCCccataaaatttg
ataaaaattgaaagatttcAATAAGTCCTTTGAGTATCTTAAACTGTTCT
AGGCATAATTATATCCGATATGTTTAATATTGACTTTGATACCGAGTACT
TTGATATCTTTAAACCATTATTGTTATCTGCATTTTGAAGACCAAGAGTT
ATCCATAAATAAGTTTTATAGGCGAAATATCAAAAACCAGACTGACATTC
AAGTGCAAAAGCAAAGGATAGAGTGTAGATGAAATCTCAAGTCTGTCAAA
ATTAGCGGGAAGTCTTCCTGgggaggaaaaaaaatttcctaggAGCTCTG
AAATCCAGGAGCTCTGCTGTTCTAAAATTTGATTCTTAAGACTCTTACCA
AATTTCATGCGATCTTATATGAAATAGCGtggaatttgaataaaaaaaac
agaaattgaCTTCAATCAAATAAATCTTAAATTTGCTGAAAATAGCTATG
AATTACATAAACAACGTAGGAACCCTCTGAATATGCGTGAAAATTACCCA
CAAAGAGACTAACaatcaaaatgttttgtttttcttagaTTATTTGGATC
CAATTACGATGATAAGTTTGAACCGAGTCCACTTAAAAGATCATTTGATA
AGCTCAAAGCTAAAACTACGGAAAGTGCTGATAAACtactcaaaaatttc
aaaaagtccgACCCCAACGTTAACAAGGAAGAAAATAACTCTTTATTCGA
TAAAGATGGAAAATTGGTTAAGAATAGACCAATTGAAGATGGTCTCGGCT
CCACCCCGCCGATGCCGACGCGAACTGAGTACGAACAAAGCCAAAACAAA
GACTCCCAATATGTTCAAAGTAAATTTTTGGAACATCATATGGGTATCCA
ACAAGGAATTCAAAAGAAACAAGATCTCCAAAACGAGACTCTGGTTAAAA
AAACTAGCCCAACATCTTCGATTCCGACTAAAGAAAACTCACCACAGGCT
GCTCAAGTAACTACCCCACAAAAACAATCACAGCCACAGTCCCAGCCACA
ACCACAAAAACAACCACAACTGCAGTCCCAGCCACAACCGCAAAAACAGC
CCCAACCACAGTCCCAGCAACAGCCGCAAAAACAGCCACAGCCACAACCA
CAAAAACAGCCACAACCACAGTCTCAGCCACAACCACAAAAACAGCCACA
ACCACAGTCCCAACCACAGCCGCAAAAACAGCCACAATCACAGTCCCAGC
CACAACCGCAGTCCCAACCACAGCCGCAAAAACAGCCACAATCACAGTCC
CAGCCACAACCGCAGTCCCAGCCACAATTGCAAAAACAGCCACAACCACA
GTCTCAGCCACAATTGCAAAAACAACCACAACCACAGTCTCAGCCACAAT
TGCAAAAACAGCCACAACCACAGTCCCAGCCACAATTGCAAAAACAGCCA
CAACCACAGTCTCAGCCACAATTGCAAAAACAGCCACAACCACAGTCCCA
GCCACAATTGCAAAAACAGCCACAACCACAGTCTCAGCCACAATTGCAAA
AACAGCCACAGCCACAGTCGCAGCCACAACTACAAAAACAGCCACAACCA
CAGTCTCAGCCACAATTGCAAAAACAGCCACAACCTCAGTCTCAGCCACA
ATTGCAAAAACAGCCACAACCACAGTCCCAGCCACAAACGCAGTCCCAGC
CACAACCACAAAAACAGCCACAACAACAGTCCCAACCACAACCACAAAAA
CAGCCACAACAACAGTCCCAACCACAaccacaaccacaacaacaGTCCCA
ACCACAACCACAAAAACAACCACAACAACAGTCCCAACAACAACCACAAA
GACAGCCACAACCGCAGTCCCAGCCACAACCACAAAAACAGGGACAACAA
CAGTCCCAACCACAACCACAAAGACAGCCACAACCGCAGTCCCAGCCTCA
AAAACAGCCACAGCCACAGTCCCAACCACAACCACAAAAACAACCACTAC
AACAGTCCCAACCTCAACCACAAAGACAGCCACAACCGCAGTCCCAGCCT
CAAAAACAGCCACAGCCACAACAATCACCTCAACCGCAAGGATTAGTTAA
GATACCAGGACCACCAAACGATACTCAACctaaaaaatcaaccaaccaaa
aacaaaatttggacaatCCACAAAAATCATTCAACGACTTGGATGGTGTA
CGGAGGTCATCTCATTACGTAAATCTAGTTGGACGACCATCAGCCACTGA
AACTGCTAAAAGTTTATTTACTTCTCGTTCTCGATCTATGATGTCCAGAC
AAACAGTCGGCAGATGCGAAATCAGCCAACTAACCTTCAATCCTGATGCA
ACTCCACCCAAACAAATGAGTTTTCCTGAATCCTCCTTGGTTCAATTGAA
ATCACCAATTCGTAGCCAACAAATTACATCAACCTCATCTCTACTGAGTA
GTATCACAGAACACAAGATTACTAAATCATCATCACTCATAAAACCAAGC
AGCCAAGCTTTTCAAATTCCTAATCCATTGGCCAAACCAGTTTCCGAACA
TATTTCTGTAGAAAGCCACCAGATAACTGAAGCTTCCTCACCATACAATA
TTGATTCCTCACGACAATCTCATAAACGCCAAGGGCGTTATAGTTCGTCA
TCATCTACAGGAAGTAGCAACGATTATTATGATATCCAAGAAACGCCTAA
GTCTTCATTGCCGCCCTCAAATTACAATCTGAGACAGAGCGTTCGCGGAT
CACCAAAACATCTGACCGATTCTTCCGGTAGTGACGAAAACGattcttta
aaattgaaatctCGACAAGCCAGTAAAGAACAGCATAGCCAATATTTCAA
CCAAAGTCGACAAACTAGCCAGCACCACCAAAGTCCTGCTGTTGGTTACA
ACTCCAATCCATACCAAGATCAAACGACGCCATCACATGGGAACCTGAAA
AATACTCCAAGATTGAGTatgaagaaaattattattaataCTACTAGTAA
CCAGGAGCCACCAAATAACTCTATTGAAGAGTATTACATGGAGCAAGGTG
GGAATTACATATCACCCAACGCCAGTATGAGGAATTTCAACAAGCTATGT
ACCAGAGCTTCTAAATACGAACGAGTTCGTTCAGATAGCTCACCATCAGA
AGAAACGGACTGGGATGAACCTAAAAAACCAATTAGATCTGTAAGCCATT
GTGATATAGTACTTGAACCATCACCACAACCGTCTTTAATGGATGCACAG
AATGTGGAATCACACCAACACAGTGATGCATCCCCATTGGTAAGCCGCTA
CATGGGTCTTGGTAAGCCCTCAAACCAAGCCCTAAAAAGTGGAGGTGAAA
GTCAGATGGTTGTAGCTGGACCTAAACCATCAGCATCTCATCATAACCTT
GACCTTCAGGAGATGAATCAAAATTACCAAACTTATTCATCGACTAGAAT
CAATTCTGAAAATCATATGGAGGATCCCCAATGTAGTGGAAACGTTAGTA
AACTCATACTTTCACACGAACAATTCCAAGCCAGTAATAACGTATCGACT
AACAGTTTTAATGCTTATCATCAGGGTGCTACGAATTTGTCAAATGTACC
ATCTAGTCAGCCCTCACACAATTCGCAGCATCATCAAATGATATATTCGA
GTGACCCTTACAGACACTCGCAGATCCATCCATATTCTACAAATGTATCA
AGGACGTCTAACCATCCCTCATATTCGAATAGACCATCATACCAACAGAC
TACAAATTCATTTCAGATCACATCCAGCCAACCTTCGCAAAATCTTCAGT
TCACACACTCCAATGAAGCCAATAGATCTTCACAATCTTCACAACAAATA
TTTCATATGCTTAAAAGTGAAACCAATGTGATCACATCACGTCCATCTGC
TACCAACACTGCCAAAAGTTTATTTCACAATCGTTCAAAGTCTCAACTAT
CCAGAAATTTACACAACAGTTCACAACACCAACAATGGTCTGCAAATCCT
TCTCCTGTAGCCTCAAACCAAGCTTCGCATAATGCTTCACATCAACAAGC
AATGTTTTCAAACAGTGCCCACAGACCATCAAATAGCCAACACAAAATGT
ATCACCAAACGATTCCAGTGGGTCCAGCACATGGTCCATCTCACTCTTAT
TTATCAGAACACAAGCTTCTACAAGAGGATTTTCTATCTACAGAATTATT
CAGACATCCTATATTTGATACCAACCAGAATAGCCAGGACGCAACATATG
TCAACATTGACACGCTGGCAGCAACAAGACCCAAAAGCCCTAGAGCCTCT
AATCGTGTATTGTCAGGAGCAACAGCTAATGAATCACCGAGTCAACAAAA
CGCAGTACCTGCTTTTATATTCATCTCACCATCATCTGCTAAGGTTGCTG
GAAACTGCAGTCGCCAACCTAGCCAAGAGTTTTTATCAAGCTCAATCACC
AGTATTGTATCCAGTCGATTGGAAGAAGAGATGCAGGAGTTTGATTCTGA
TCATCAAATAACACCACAAAAAGTCCATAACTATCAGAATAAGAATCCCA
AATCCACGGAAATGAACAGTGGAAAAGAACAACACACTACATTGACTCAA
CCGACATTTGGCATGGTAACTCGATCGCGTTCTAAGATCAACCAAGAGGA
ACCCAAGACGCCAGAAGTTATTAAAAAGACTAAGGACCCCAGAACAGTCC
AACAAGAACCGGTTGAGCCTAAATCACCAAAGACTCCCAATAATAAAAAA
CCAAAAGCTAACGAATTTACATTCGAAAACGATGATAATAAGAACGAACC
GAAATCTTCCgttaaaggaaaaaagaaaacgttGAAGAAGACGAGAGATA
CGTTAGCGCTTGGAACACAATTGGATGTCGGTGGATCAAGCTCAAATGTC
ATTATGACACGAAGTATGTCCAAACGGCTCAACACCAATAACCCAACTGA
ATGAGTTACCccaaataaacattttttttgatgCTGGTcatcaattttat
attttatttattttttctttttctcttatTATTGTTGCTtccttttcttg
atttttattacgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045256XLOC_045256Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072949-exon-scaffold_86-1491911889:1208228..1208384TCONS_00072949-exon-scaffold_86-1491911889:1208228..1208384Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1510915933:1208228..1208384TCONS_00072949-exon-scaffold_86-1510915933:1208228..1208384Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1575043694:1208228..1208384TCONS_00072949-exon-scaffold_86-1575043694:1208228..1208384Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1491911889:1210249..1210524TCONS_00072949-exon-scaffold_86-1491911889:1210249..1210524Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1510915933:1210249..1210524TCONS_00072949-exon-scaffold_86-1510915933:1210249..1210524Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1575043694:1210249..1210524TCONS_00072949-exon-scaffold_86-1575043694:1210249..1210524Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1491911889:1214333..1214519TCONS_00072949-exon-scaffold_86-1491911889:1214333..1214519Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1510915933:1214333..1214519TCONS_00072949-exon-scaffold_86-1510915933:1214333..1214519Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1575043694:1214333..1214519TCONS_00072949-exon-scaffold_86-1575043694:1214333..1214519Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1491911889:1215316..1219791TCONS_00072949-exon-scaffold_86-1491911889:1215316..1219791Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1510915933:1215316..1219791TCONS_00072949-exon-scaffold_86-1510915933:1215316..1219791Clytia hemisphaericaexon
TCONS_00072949-exon-scaffold_86-1575043694:1215316..1219791TCONS_00072949-exon-scaffold_86-1575043694:1215316..1219791Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1208228..1219791 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.00368674	0	0	0.0049979	0.00806954	0	0	0	0	0	0	0	0	0.00449753	0	0	0	0.00397872	0.00429817	0.00378517	0.0214458	0	0	0	0.296476	0.00534384	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072949 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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