TCONS_00072945 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072945
Unique NameTCONS_00072945
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3494

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072945 ID=TCONS_00072945|Name=TCONS_00072945|organism=Clytia hemisphaerica|type=transcript|length=3494bp
ttgagcAGTGGGAGGTCAAAATGAAAACTTTATTTACATTTACCACCCTC
ACATTGGCGTTTGTATGTAGGTGGACATGGGTGGCAGATGATATCGAATA
CCCTGACTTGACGAAATGTCCGATTCAAGTGCAACCTATGGGATGTTACA
GAGATAAGGATACTCCCAATCGTGCTCTTCCTGATCAAATCGCTAACAGT
CGGGATCCTGGATCGACAGTTTTCATGGAACCGAATTTGAATAACCATTG
GGGAAATTTTGCTGCCTTCTTGGCAAATTTCATTTGTCAGTGTGCCAAGA
AAGCGGCCAAAGAAAAACGTGGGCAATATATTGGTATTCAATACTACGCT
GAATGTTGGAGTGGAGAAAAAGACACAAGCGATCCTCAATCAGAAGCCTA
TAAGAAGTACGGTGAAGCTAACGCGCAATGCATTGATAATAATTATGAAA
AGTATGATGGATCTAAATCACCATGTGGTCTTNGCATTGATAATAATTAT
GAAAAGTATGATGGATCGAAATCACCATGTGGTCTTTATGCTGGTACACA
ACTCACCAATTACGTCTACAAAATCACTGAATTGGACCAAGaCGTTCTTT
GCCCATTACATTTCAAACCAATGGGATGTTACAACGATAACCAAGTTAAA
CCCAGACCTCTGCCAGATTACATTATGAACGAGCGTGACTACACTCTACC
CAATTGGAATGGTCACATTATTGATTGGAACGGATGGGACAAATACATGC
CAGCGCTGATATGTCGTTGTGCGATGGCTGCTAAGAAAGGGAATTATAAA
TATTTTGGTATTCAATTTTATGGTGAATGTTGGGCTGGCAACGATGAAAA
GGAATTAAAAAAGGATGGAGATGCGGATAAAGACAAATGCTTGGTTAAAC
TTGGAGCTCCACCATACGGTCAATACTGTCCATCAAAGAGTGAACAAGAA
GGGATGTGCCATCCACAATTGTGTGTTGGTGTTCAGAAGACAAACTATGT
CTATGAAATGTTACAAGGCCCTGGACCTTGTTCCAAAAATCCATGCAAAC
CAAACGAGAAATGCATTCCCAACCCaagtttgaaagaaaaattcaaatgt
gAAGAGTCcccttttgaagaaaaagaccCCGAAAAGAAGCCGGAGGACGA
CCCTACAAAACCTCCATCGAATAACGAGCCCTCAAACGAAAAGCCCGTGT
CTATTGAACCGAAAGACGAAAAACCCACATCCACTGAACCGAAAAACGAA
AAACCTGCACCTACTGAGCCCTCGAATGAAAAGCCCGCTTCCACTGAACC
AAAAGACGAAAAACCCACATCCACTGAACCGAAAGACGAAAAACCCGCAT
CCACTGAACCGAAAGACGAAAAACCCGCATCCACTGAACCGAAAGACGAA
AAACCCACATCCACTGAACCGAAAGACGAAAAACCCGCACCCACTGAACC
GAAAGACGAAAAACCTGCATCTACTGAGCCCTCGAACGAAAAACCCGCTT
CCGCTGGGCCGAAAGACGAAAAACCCGCATCCACTGAACCGAAAGACGAG
AATCCTGCATCCACGGAACCGAAAGACGAAAAATCTGAATCCACTGAGCC
GAAAGACGAAAAACCCGCATCCACTGAACCGAAAGACGAGAATCCTGCAT
CCACGGAACCGAAAGACGAAAAATCTGAATCCACTGAGCCGAAAGACGAA
AAACCCGCATCTACTGAGCCTTCGAACGAAAAACCTGCATCTACTGAACC
GACAAACGAAATACCTGCATCTACTGAAACGAAAGACGAAAAACCAACAT
CTACTGAACCGAAAAACGAAAACCCTGCATCTATTGAACCGAACAATCAA
GACCTAAATAAATATAATCCGCAACCAACGCAGGGAAACAGAATGCCACT
TTGCTGTAATACAAACACTTGTAATAGAGTAACAAAATCGTTATGGTGTC
ATAAAGGCAAAATGTAAGCATAACTCAGAAAGATTACACAGTTGTCATGA
TCCTGAGTGAGAAAATATGGCAAGAACTTTTATTgcaaaatcatttttat
ttttaggcagttAAGTAGTATTTGCAAAACATTTAACTTGTACATAAATA
CACAATCACATTCGAAAAGCTTTCGAATTTTAGTATCATCTAAATATCGA
ggattgaaaaaagtttgtttcacTTGAATTATTTCCATtgttcttcttta
aaaaaaaattaattttgcaatattataaaatttcaaatttataaatattC
TCTGTTATGACGTTTATAAGTTCGCATTTGTATGCAAATATTACTCCATT
TTAAAGGACTTCCTAAGTAAAGCCTTCGGAAATGttggaatttgaatttt
taattttgatgaatgtCTACATACAATGTATGTCTTATATACATTATAAG
GAGAATGGGTTCAAGTTGATCCAGGTTTTTTTACAACTTCAGGTTACTTA
AGAAGCTAATAGCAATACGGTTTAGCGGAAGACTACAGAGTTGAATCTCC
tttgtaggatttgaagccacttatttcctacaTAAGTTGCACGGCCCGCa
tggttttcatacaaacgctGAATCAAAAGTATTACATTCACCgcaacaat
ttgaaaaataaaaaacgccAACGCAAAGGAAatgctacaatcagtgccat
aacatattggcaattttggctattttaccattttacaaaaattgaagttc
gagcgagattgtcaatttcgggccttcaacttgatttcatcgaatatttc
gatctgggagggatttattggtttctaggctatatttcaagccctaccgg
accatttttgaacttttggatcctcagatcctaaggtctggCGTTAAAAC
tcaagagttaaaactctacctttccaacctaatttggagcacttacaaat
cgtttgtggttataaaatttcgtggggaatttcccttttgtgccaagtat
tttggaacTGATTGTAGATTCAATCTGTATTCCGAAACGCAGCGCAGACC
TTAAGgctttcactttttcttgtttaaaaaaaaggttgaagattcgcctc
tagccttcggcttgaaacacATGAttaataatacaccttttcgactgtag
ccgccgccaattgccgcgcaggGTTTTTTTTGCCCGTACCAGCCTTTTTT
TTGCCCCTATAGACAATAgtaaaatgtgtcaaaaaaggattcgGTCGATT
AAGGGGGATAAtcaaataattaagtggcacgcgactacggtcgaaacgAT
GTATTGTCAACTATTGCCTGCTGCTATTATGGATCATAATGTTCTGTTTA
accaaaaatataaacaaattgaCATCATACAACCTCCTTCTTTCATAACG
TTAACTAACaccactttcatttttcaagttCTTCAAAAATCTACCAACAA
ACTTCTTCTTTTTTACTTTCGACGGTTATTTCCAGCCATAATCATAGCAA
TTcgaatgaaaatgttgatagtATCCATATAAATACCGATCGAT
Run BLAST on NCBI

transcript from alignment at scaffold_86:1133088..1149639+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072945 ID=TCONS_00072945|Name=TCONS_00072945|organism=Clytia hemisphaerica|type=transcript|length=16552bp|location=Sequence derived from alignment at scaffold_86:1133088..1149639+ (Clytia hemisphaerica)
ttgagcAGTGGGAGGTCAAAATGAAAACTTTGTAAGGTTTTCTTTCgtgt ttctttttcaatttcttagAATTTCTATTTGTGTTTTTATATACACTGTA GTCAGAatagaacacccccttctcacagacctggtaggattttgTTTTTG CCAGGCGGAgcaaaaataacggactgaaactcgattgaaattgttttttt atgagtTGGGATTTCATTTTCGTTGTTCTCAAGTCAGACAATTCAGtagg gatggaaaaaaaatgcaatattttacaatgagaatttgtttatttgatta ttttcaatggggacaaaaatcggagtataattttctaccgggacgatatt ttgaccaactGCTCCATTTCGTAGTAaggggttccagtgggtctgaAAAG GCGTGTGTAATAGAGGTTAAATTAAGGCCACGAGATAGCGCAAGTTTAAA TGCTTCTCTGATATTTTAGATTTACATTTACCACCCTCACATTGGCGTTT GTATGTAGGTGGACATGGGTGGCAGATGATATCGAATACCCTGACTTGAG TAAGTTTTGTGAGTTTTTGAAAGAAGAAGAATGTTAAGCAAAAAGTAAAA ACCGACGAGTTGATTTGATGCAATGGTATACGTttattttattagaacat ccaagccttcggatgttcttaacttttttaggttTAAGCCTAAAGATATT CTTACGGTGTtcttttaccattttgtgagctgctttttttggaatttctt aagaaatcgggtgttctAGAATTTGccgagccttaaaatgtttttaattt agaTATGTTATCCTCCTTTTCTGAGGAGCCTCCTCAGGAAAATTCTCAAG GTGACTTTATGAATGATAActgcatgaacatataaaccaCTGGACCTTTG TCTTCTATTGTGTCTTTCGATTTTGTGGTCCATTTTAGGGGTCCATTTTG TTGTCAACTTTTATTATCTCNtgctctattataaaaaagaattttcattt tgtaaacaatcctcctatattgttggaatattgcaaatctagctgacaat atattgcggacacctctTCAATATATTGCGAGCATTAAGCAATATATTAT CAATATAAgattttaacttgttcttaacattttggccatcgaagccctta tatatagtttgttcttacaaaaaatctGTTATTTTAAGATGTTTTGAATA AGTTAGcagtaatatattttttatttcttagatTTCAGAGAACATTTGAA ATTCCCTGATAAGATATTGGTTTATGGGGCGTTGCCCTTTGTATTGCCGC AAAAGAAGCTCCTTGGATTTTCTCCTAAACATGCGACTGGCCCCTAGATA TGTTATCCTCCTTTTCTGAGGAGCCTCCTCAGGAAAATTCTCAAGGTGAC TTTATGAATGATAActgcatgaacatataaaccaCTGGACCTTTGTCTTC TATTGTGTCTTTCGATTTTGTGGTCCATTTTAGGGGTCCATTTTGTTGTC AACTTTTATTATCTCCCCTGTAAGTCGAGTTAGTCAATGTTCAAAGTGTT TAAGCGCTTACAAAACAACATTCTTTGTTGTTATTGTCATCAGGAAAAGA GACTATGGCATTAATATGGTGTGAGGGGCTTATCTAATCAATGGTTTCGA TCTTATCTTACAGACCGACAACAAAACGTCTCTGTTTCTGGCGTGGACAC TTTTAAACGCCCTGTTAATCACGGAGTTCCTCAAGGATCTGTCCTTGGAC CTATTCTCTTTCTGATCTTCATTATGTTCTTCAAAATAGTCAAACGAATc tttttgctgatgataccTGTCTCCTCTCCTCTGACTCTGACCTTCAGTCT CTAGAAACCAAAGTCAATTCTGATCTTACACGACTCTCCTCTTGGCTCCG AGCAAATAAAATCTCACTCAATGTATTGAAAACAGAAGTGTTGCTTACCC GTTCCCTATTCAATGAAGTTAAAGCTCGATGACTTCGAACTTAAACTCTT GACTTGCGTAAAATACCTTGGGCTATTTCTCGATGAATTTCTAACCTGGA ACTCTCATTTTGACCATCTAGCAAAAAGACTTGGCAGGGCAAATGGCATA CTTGCTAAGCTTCGTTATTTTGTTCCTGTTTCTGTCATAAAAACTCTTTA CTATGCTCTTTTCCATTCACATATGTAATATGCAAACATCGTCTGGGGTC AACGATTGACTCAACCAACCTAATTATATTGTAATATTCACATAGTCTGg cagaaataaaagttgaccTTGAAAAAGATTCCGCGTAAACTTTCTTTGTA CCGTTGGAAGTGGAATTTTATGAGGTaaacatactcagagcctcacgtCG AGGCCCTTTGGGGGGGGATATTGGTGAAATAAAACATTAAGGACTCATCT TCGCTATAAAATGCCTACAAAAGTGCTATCCTTGCAATGGTAGGTGTCTT TTAAAACACTCAAtctatacccctgtctcaaaaatctAGGGGGGGGGTAC CCAATAAACATTTCTGAAAACCACAATCAATTAAACAGTGTCATCCATCA TATGAAATGGGTCAAGTGCAAGGCAAAAGCACATGGTGAGAGCGCTGCCT TTCAGAGATTTTGAATAGCTTTGATAGGTTTTTATTGTAGCTGATAACCA GTACAGTGCTCAAAAACGTATCTTTTTTGGGGCAAAGAAGTACATTCAGG CTTGATTTTACCAAAAGCTTTCCCCAAGGGCCTCATcatgaggctctgag tatgatAGTCTACATAAAATTCCGCATCCAACGGTACAAAGAAAGTTTAC GCAGATTTTTTCTCTACGTTCACCCCTGTTTTATTGTATTTCAGCCAGAC TAATTCTTTTATCTTTCAAATCCAAACTTTTAGTAACACTATCTCTCTAA CAAAATTTTACCTGGAGAttaattttgtgttttgatttacggtaaacaaa caaaaaattatatatccGCGTTGTCTGAAGAACCTTGAGAGGGAACAAAG ATGTGAAAAATATTATAGTAGAAACTTTATCATATTTTCTCCCAAAACAA ATAAGAAATTACAAAGAGTGGTGTCCATAAATGGCATAAATCCTCTCCAG ACGAAAAAGGGCGTGTACAACTTACAAATTATGAATTACAAGTGAATAAG AAAGCAACAAAAATTACGTTCAATATAATTAACTCTCTATAAATGAtcct ttttataatatattttttagaaaatagaCAATTCCAAACTTCAAACAGTT ATATTTCTGGCTCTTGAAGTCCTAGAAGGCTTGTTTGATTTCAAAGAACC TTTTTTGTTAAAACTCCTTCGGCACTGCAGATCTTCATTTTGTCAATAGA CATTTTCGGCTATGCGTGCATACATGCCCTTATCACGATCCTTACGCGCC CTTctcagaaattgaaaatttgacccaATGGAAGTTCAATGAAAGTTTAC CTTTCAGAGGCTCCTGTGACCTGCATTTGGtttcaaaaactaataaattg gGTACAAGTGAACGTAGAATTTCATAGAGATTTCGAAAAAACACTAACAA AATCTAGTCGGTAACGAACGTGTCAAAGGATCAGTTACCATAAACATATG GAACAAAATCAGTAAAAGTTTCTATATACGTCGCACTTTCATTTCGACGA AGGTCGGTTGAATTTTTTAACTNTTTTCGGCTATGCATGCATACATGCCC TTATCACGATCCTTACGCGCCCTTctcagaaattgaaaatttgacccaAT GGAAGTTCAATGAAAGTTTACCTTTCAGAGGCTCCTGTGACCTGCATTTG GtttcaaaaactaataaattggGTACAAGTGAACGTAGAATTTCATAGAG ATTTCGAAAAAACACTAACAAAATCTAGTCGGTAACGAACGTGTCAAAGG ATCAGTTACCATAAACATATGGAACAAAATCAGTAAAAGTTTCTATATAC GTCGCACTTTCATTTCGACGAAGGTcggttgaatttttttaactgtCAAC CCACATGATATCTCCCCCTTTTTTAGTGAACTTGTCCCGACCTGTTAACA GCGTTGTGTCTAGCAACTGTAAAACCACCAGCCTACTTTGTTATAAGAAT GTGAGCATTGTTCACCACTCTTATCGTTGTCAGAATCATAAGTTTAAAAT TTCATACCATTGTGATATGTTTTAAAGGCGTATCATGGCTTGTCACATTT CCTGTCGCACCAGTCAGGGTCAATTGATATTTGCACAAACATTTCTGAAA ACCACAATCAATTAAACAGTGTCATTCATGATATGAAATGGGTGAAGTGC AAGGCGAAAGCCCACGGCGATAGTGCTgcctttcaaagactttgaatagc TTTGATAGGTTTTTATTGTAGCTGATAACCAGGACAGTGCTCAAAAACGT ATCTTTTTTGGGGCAAAGAAGTACACTTCAGGcttgattttaccaaaagt tttctCCAAGGGCCTCATCATGAGGCACTGAGTAtgataatctacataaa attccgcttccaacggtaccaagaaagtttacgcggAATTTTTTTCTACG TTCACCCCTGTTTTATTGTATTTCAGCCAGAATAACatattgtaaatttt agtttaaattttgcaggcaaataaatcatttttgaatattgaattgaatt gaattgaattcttTGGTTGCATGAGGTACGGTGGGCCCAGACTACCTAAT TATATCTGTTTTGTACATGACCCTAAGAAACCACCGTACCTCATGCAACC aaagtataagaaagccgcggctggaatatgtaccgcattgtcttttcagt taatctccgagctttataagaacatcaagatgctcagtttattattattt tccttcacaaaaagtttttttgttgctagatatctttgagtctgtaccca atagaacacttgaactaattttggacatattttaggggtattttgtagaa acaatagtttttcgccaaaattgaaattataagaactataNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNattcaagatgacaactttcctgtcagtttaaatgataaatt ttgaaggtgctggcttgaaattttcacagtattatcttgatgtacttttt cattgattcctaaaaagatttcactgaattattgtgaaggcatttcgagg cacctcattagcttttgagttctttcagcccagctattttgtgcttgttt gaatttcttagtgttgatttttcctttacaatgattttataatgcaagtg tattatcaagggcatactattaatgtctaaaacgcactgacaagtaagta ttaacgacaaagcAATAAAGTTTAcaattaaagatgctacattactgatt tcttgatcaacaaagtcatcaaatacgacagagatagaacaacagaaaat caaatggtatcattccagccgcggctttcttatactatgatgcAACCAAA GAATGTTGTTTTGTAAGCGCTTAAACACTTTGAACATTGGCAACAATGAA ACTCAAGCTCTGTATTACTCGGATTTTTCGAGAAACGATTAtactgtaca gggtgtccctaattaaagtaccgagtttgaacatgcgattgagtagaaaa gtttgtgtgtgttatcgctaaaatataagaacgttctccatcacacaggc ttattacaaaaggtagttacaacgtataaattaatcgtaatgacaaagaa aaaagagggagaatttaaaatacaattttgtgaacacgcacataaaactt tctactcaatcgcatgttcaaactcgatactttaattagggacaccctgt aaacACTCTATTAAATTGTAttaggatttttattttcaaaaagtttccta CCAATCTTTGGGGGGAAAGTCAGTTTGGACAAAATGCTATAAAGGTATta tataattttgaaataacttttCCTGAAGACCCtgcaatgttattttttgt aaGAGCAACGGAACtccagtttaaaaaaaaattattttcaactgaggatt gtttgtaaaaacatgaaactgccagtattgaaaaaataattttcattact ttaacTACGAAATAACTTTTCCTGTATTTTTCGTGATGTTATATTTTATC TGGAAAGTGCGACTTTTAAAACCATTGTGTTTTGTACATTGGTGTTTCAA ACAGTTTTCTCAAATAATACACAAACATGCTTTTTGTGCATGGGTTGAtc ccaaacaataaaaaatagttCAAAACATTTTGAGATTTGAGCGGTcgaat ttatgaaaataattatttgagcAGTGGGAGGTCAAAATGAAAACTTTGTA AGTTTTTCTTTCgtgtttctttttcaatttcttagAATTTCTATTTGTGT TTTTATGTACAatgtagacgatgctatcgtccgtataatatgttattatg atataacatagtttgtatattatataaaacgtaatatgtttcgcggcgga tagagtctgtgtttacagctactcccgtaaaaaattcccgtctcacgttt gttcctcttagataaaactcgtcttagactatagcatagtctatgtACAA TGTAGTCAGAATagaacaccccttctcacagacctggtaggattttgTTT TTGCCAGGCGGAGCAAAAATgaaagcatccaacgaggacctttttttaaa tatctgtttcccagacatagcgttcctggaaaatttgatctgttggccga atatttcaaaaatcttattcctagaaatgaagatttgtttctccgcaaaa cctaaatttttaatctcaaagtatctttcctagaaaatttgatctgtttc cacaattttcagaattaaaaatctaatctgttttcccaaataggatatct gttcccctctcctggaaattttcatctgtttccctttctttttgttattg atatctgtttcccccataaagttcaatctgtttctccaggggaataaggc gggttcgtggaggtcaaaactcttgcaacgttacaaatcattttcagaag ctcgttttgggctcaaacgaagcgtataactaattagaataagattcagt cgaggcagatgttttttcattttgaaattttgcgtaattcgcaaaaatcc tcaactTTGCGCtatcttgatgacgtcataaaaattgaaattcaaataac ttttgatagaatcatcaaaataatttcaaacttttaccaaagatgcattt caatgcaaattttcaaaacatttcaaaaaattttcaaaatcttgatgacg tcagcattttttaaggtttttagttttttgcctgaaaattgatgacgtca tcaaatttcgttaaattttttctttaattctGAAAAGATtaataatatgc atctttggtcaaaatttgaaattattgggatttcaatttttatgacgtca tcaaaatagcgcaaaattgaggatttttgcgaattacgcaaaatttcaaa atgagaaaacatctgcctagactgaatcctaTTCTTCTTAgtcatacgct tcgtttgagcccaaaatgagcttctgaaaatgatttgtaacgttgcaagc attttgaccccgccttaatcccctggagttccaatgcaatatcatctttt ttggaaacagatatctatttcccaatttattatctcatctcctagaaata ttgatccgTTTCtcgctgatgacgtcatcagctggagcggggaaacagat agttttaaggaaaaggtctctcctagaaaatcggatctgtttcctcaatt ttcaaaaaaagctctctcctggaaaagggaaacagatatttcgggaaaat gggctcgttggctgcttctgcaaaaataacggactgaaactcgattgaaa ttgtttttttatgagtTGGGATTTCATTTCCGTTGttctcaagtcagaaa attcaatagGGATGGAAAAAAATGCAATACACtcatttctttttataagc atgtactgaagctcaaatttccaaaaaaattaagcgctaagcataccttg aggctcagccaaagtAATatttagaatcataatttccaaaacttcagaCA ACAACAACATTctaaaacaatagaatgtcttcatttctctcaagattaaa gagaggggaaaatgcgcgaaaattatttaccccccccccccccNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNGAaaattttttcccccccccccctccttcataa tttttttaccaagcatagggttaagcataagTCGAgactcaaaattgagc tttacttaagcataatgagcttcagccgaaatttaccgtatgcttataaa acaaaatgagtgtattTTACAATGagaatttgtttatttgattattttca atggggacaaaaattggagtataattttctaccgcgggacgatattttga ccaactGCTCCATTTCGTAGTAaggggttccagtgggtctgaAAAGGCGG GTCTAATAGAGGTTAACTGAAGGCCACGACACAGCGCAAATTTAAATGTT TCTCTGATCTTTTAGATTTACATTTACCACCCTCACATTGGCGTTTGTAT GTAGGTGGACATGGGCGGCAGATGATATCGAATACCCTGATTTGAGTAAg ttttgtaactttttgaaagaaaaagaatgttaagcaaaaagttaaaaccg ACGAGTTGATTTGATGCCAtggtatacgttttttttattagaacatccaa gccttcggatgttcttaactttttgaggttTAAGCCTAAAGATATTCTTA TGGTGTtcttttaccattttgtgagctgctttttttggaatttcttaAGA ATTCGGGTGTTCTAGAATTCGccgagccttaaaatgtttttaatttgctc ttaacattttggccatcgaagccttatattcctATAAAAGAAAGCGTAAT TGGGAAGATTTTACGCATAGTGTGCAGTTAAaacgaccaagaaaattttt acGGCATACAGTTCCAGATGAAGCTTTCCATTTTGCTAGGAGCACCCATT TATTCAATCTTTATTCAACGTTCTaccattcgatacgctccattattcga tattAATGAAagccaccgtcaacaagaaacactCATTATTGACGCTCTAA CATCcaatacgctcccttattcgatgatatAACCTAACCCAGTTAAACAT CGAAATAGAGAACGtcaattgtatatttttacgGTATTTTCAGCGAAATG TCCGATTCAAGTGCAACCTATGGGATGTTACAGAGATAAGGATACTCCCA ATCGTGCTCTTCCTGATCAAATCGCTAACAGTCGGGATCCTGGATCGACA GTTTTCATGGAACCGAATTTGAATAACCATTGGGGAAATTTTGCTGCCTT CTTGGCAAATTTCATTTGTCAGTAAGTGTTCTTATGATTGAAGTTTTACA CTCTCGTAGGGATACCCTTCACATTTTTTATACTATTCTGGCTCGTCGAC TTTGTGTAGGCCCCTTTCTAATTCAAAAgtttgttgaaaatatttgccct cgggtaagttatggcatgtctcaaaaaatgaaaatcaccataatttttag atcgcattagtcgacagaaaatgaccaaacaaatgactgaacatgaaggg tactatgatgtagtttctagcctgatgtgtaacctaattgttttctcgct aatTTACGcgaaaaaccacaaaaactgattattacgtcataatcgatgac gtcatcaaaactgaaaattgaatttctcgagaATGGTTCATCCAATTGTc ctcaaattttcaccaaagatgcatctcaCTAAAGTcgaacatttgaaaaa atattttcttcaaaattctgattacgtcagcaaaaagtagaatttttcgt tttttactaatttctgctgacgtcatcaaactttcgaaaaaaaatttttc caaaagattGACTTTGGTGAGATCAAGGAGGTGGAGACGTCCTTGGTGAG ATATATCTTTGgtaaaagtttgaagacaattggatgaACCATTCtttaga aattcaatttttagttttgatgacgtcatcgattatgacgtaataatcag tttttcgcgaaaatcagtgaaaaaacaattaggttacacatcaggttaga aactacatcatagtacccatcctgttcagtcatttgtttggtcacttctg tcggctaatgcgatctaaaaattatggtaattttcagacatgccataact tacccgagccGTAAtattattgagaaaaaaaggaaggtccctgaaaattt tcaagtgcTAAAACTTACTCATGGTATGAAAAGCTTTCACTGATGAATTT TAACATTAGATGAAACACTTATAAGtgtaggatctcaggatctaaaagct caaaaatattccaataaGACTTAGATGAATATAGCCTGgaatttcgacca tgattgtagtacaTTAGTTTTTACTAGCTAACATACATGCCATATCAAAA TAAAGAATTCTTGCCTTTTTTCTTTCAGGTGTGCCAAGAAAGCGGCCAAA GAAAAACGTGGGCAATATATTGGTATTCAATACTACGGTacgaaaaaata tgttttataCACAATTAAACGGacagttagtttgttgtgataACACAAAA TCTGCAACAACCTTTAGTTTCTTCAAGGGTATGTTTAGAAGAGAACTTAT TCACTGAATTTCCAAAGAAATTGCTCCATTTGAATATTAATATATGGTTT TCCAAAACATGACACTAGTATACCAAACAATCCTTCGAGAACAGTAAGTT TAGAGTGGAGttacaaattcaaaaataataaatcttTCTATCGTAACAGC TGAATGTTGGAGTGGAGAAAAAGACACAAGCGATCCTCAATCAGAAGCCT ATAAGAAGTACGGTGAAGCTAACGCGCAATGCATTGATAATAATTATGAA AAGTATGATGGATCTAAATCACCATGTGGTCTTNGCATTGATAATAATTA TGAAAAGTATGATGGATCGAAATCACCATGTGGTCTTTATGCTGGTACAC AACTCACCAATTACGTCTACAAAATCACTGAATTGGACCAAGGTAACTCA GGATTTCGTACCCAAcccaatttttgattttattgaaggTAGTAGTGCAA TCGTGTACAATTATGGTACAACTTGTAACTGTGAGCAATTGTCTGGTAAA ACGGTAAAAATCCGAACTAAAGAGATGAGTCTTGGTTAACCCTGCTAATT TTTCCAAAGAGGCTATAACTATTTGATATCTGAGCTGtaaataaaagaat ttgaaatgCTTATCTGTTAGAAAAACTAGAGATTAATCATCTCTTTTAGC AGTTAGCCCCTTCATTCAATATCATATCCACTCCACTTGCTAAGACTTCC TCGCCTGGTCACAGGGACATGAGATACAAATTGACGAACCCATTCCTTGA GCTGCAGCtatggattaaattttgcgatatCTTTATGATAGTTTATTGAG AATTAATGAATGTTTTGTACGttacttttaatttttagaCGTTCTTTGCC CATTACATTTCAAACCAATGGGATGTTACAACGATAACCAAGTTAAACCC AGACCTCTGCCAGATTACATTATGAACGAGCGTGACTACACTCTACCCAA TTGGAATGGTCACATTATTGATTGGAACGGATGGGACAAATACATGCCAG CGCTGATATGTCGTTGTGCGATGGCTGCTAAGAAAGGGAATTATAAATAT TTTGGTATTCAATTTTATGGTAAGCAAACTTTTTAGGCCTTCTATTGTCA TATCATCAATAAATCTTTTCTTTGTCCCTTAAAAagtatatatacagttg acgctctctaattcgacgttctacgtctactattcgataggctccctttt tcgatgaaatttaaagtccccgtcaacaagaaactcacacaaacgacgct cccttattcgataagctcctttattgggctcttccagaaaaaatccgttc atggggggtggaggatgaattgtccaggggtattgaaaaaataccaaaaa attgcaatgtccaggggggtaaattccaatgtccaggggtaattttttgt gtccacggggttgatttgatgtttgtccaggggtataacccatgtccagg gggttaaaaatcgaaatgtccaggggtaattcatgaaaaaaaaaaatata tcctccacccccatgaacggtttttttctggaagagcccattcgatgaaa atccgattccccttgaagatcgaataagagagcgtcaactgtatatatta atgtatttttgaaggaaaataggGAACTCAAAGTGGGATTAATTGTTTTC AGACTCGAAGGTGAAACTTatcattgtaattttttttaaattcttccaAA GCTTAAATTGGTTctggcttaaaaaattttggattaaaATCTATGATCTT TTTCCCAAAGGTGAATGTTGGGCTGGCAACGATGAAAAGGAATTAAAAAA GGATGGAGATGCGGATAAAGACAAATGCTTGGTTAAACTTGGAGCTCCAC CATACGGTCAATACTGTCCATCAAAGAGTGAACAAGAAGGGATGTGCCAT CCACAATTGTGTGTTGGTGTTCAGAAGACAAACTATGTCTATGAAATGTT ACAAGGTATTTAGTCATCTGCTCGTCCTCTGAACGAAGAATAGAGGAGTT TAGCAAATCATATACAAGGGTATTAAATGCAAAATGATTGTTTCTTTAAC AGTTCATAGAAcgcgagaaaattcacttcaaagaggggACTTTTTTCTGA GACACACGGTATTTGAGCATTTTGGGCcttcaaacaaattttgaaatgtt tttatgtttaagtaactTAAATGGAATCTCTTTAAGTCGAACATGCAATC GGAACAAAATTCTTTTAGAGCTTTGGTGACAGACTTCcaaattttttata tataaaaggTGCCATTCTGGTGCCATATAGTAGGGGGTCAAGCCTTGGGT CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNcaaaaaatgtattacaacaactctctgactaaaac acacaaagaaatacagccgcttgaagttcaaaaacataccgacgtcagcA CGAccaagacaagatttgacgtcaaatcacagtagagctgacagttagtt ggtcttaaacCGGCTGTATTCCTTTGCGTGTTTTAGtcagttagttggtc ttaaacCAGCTGTAttcctttgtgtgttttagtcagagagtagttttttg ctcagaatttcatgctctatcagatggtaccaatcattttcgtttatttt gaagTTCTCAAGCACAGGAGACGACTCTATTCCCATTTAGTTATAAGATA TTCAAGAGCAATTCTCTCCTCTATATCACTGTTTCACAGAGCTGCTGGGA CTTCTTTTGAACTGCTCATTAAACTGTACAGTAAAAAAGATGTCCAATGG AAATCTCtgaaattttggcaaaagaaGGTACCATTGAAATTTCACAAAAC TGGAGATAATGACCTCCTCAGAATGAATAGTCCATTCCAACTATGGAAAC TATCTCATTTTATCACTGACCTGATTTGCGAAAGAGGCTttaatgaaatt ctttttttctcaattctAGGCCCTGGACCTTGTTCCAAAAATCCATGCAA ACCAAACGAGAAATGCATTCCCAACCCaagtttgaaagaaaaattcaaat gtgAAGAGGTCaaagaataattttatttgaaagcatAAATCGGGTTTTGT AACAACCATTACTGAAGAATTTTCAGAGTACTAACTTAGTTTGTAATTTG TATTTGTTATAGTTCTTTATTATTTTGTGAATTtaacatgaaaaaaaaac agtatgaaATCTACAATCAAATGCGtgcatatttcaatttttttttgttt acttactCTTTTAGTCcccttttgaagaaaaagaccCCGAAAAGAAGCCG GAGGACGACCCTACAAAACCTCCATCGAATAACGAGCCCTCAAACGAAAA GCCCGTGTCTATTGAACCGAAAGACGAAAAACCCACATCCACTGAACCGA AAAACGAAAAACCTGCACCTACTGAGCCCTCGAATGAAAAGCCCGCTTCC ACTGAACCAAAAGACGAAAAACCCACATCCACTGAACCGAAAGACGAAAA ACCCGCATCCACTGAACCGAAAGACGAAAAACCCGCATCCACTGAACCGA AAGACGAAAAACCCACATCCACTGAACCGAAAGACGAAAAACCCGCACCC ACTGAACCGAAAGACGAAAAACCTGCATCTACTGAGCCCTCGAACGAAAA ACCCGCTTCCGCTGGGCCGAAAGACGAAAAACCCGCATCCACTGAACCGA AAGACGAGAATCCTGCATCCACGGAACCGAAAGACGAAAAATCTGAATCC ACTGAGCCGAAAGACGAAAAACCCGCATCCACTGAACCGAAAGACGAGAA TCCTGCATCCACGGAACCGAAAGACGAAAAATCTGAATCCACTGAGCCGA AAGACGAAAAACCCGCATCTACTGAGCCTTCGAACGAAAAACCTGCATCT ACTGAACCGACAAACGAAATACCTGCATCTACTGAAACGAAAGACGAAAA ACCAACATCTACTGAACCGAAAAACGAAAACCCTGCATCTATTGAACCGA ACAATCAAGACCTAAATAAATATAATCCGCAACCAACGCAGGGAAACAGA ATGCCACTTTGCTGTAATACAAACACTTGTAATAGAGTAACAAAATCGTT ATGGTGTCATAAAGGCAAAATGTAAGCATAACTCAGAAAGATTACACAGT TGTCATGATCCTGAGTGAGAAAATATGGCAAGAACTTTTATTgcaaaatc atttttatttttaggcagttAAGTAGTATTTGCAAAACATTTAACTTGTA CATAAATACACAATCACATTCGAAAAGCTTTCGAATTTTAGTATCATCTA AATATCGAggattgaaaaaagtttgtttcacTTGAATTATTTCCATtgtt cttctttaaaaaaaaattaattttgcaatattataaaatttcaaatttat aaatattCTCTGTTATGACGTTTATAAGTTCGCATTTGTATGCAAATATT ACTCCATTTTAAAGGACTTCCTAAGTAAAGCCTTCGGAAATGttggaatt tgaatttttaattttgatgaatgtCTACATACAATGTATGTCTTATATAC ATTATAAGGAGAATGGGTTCAAGTTGATCCAGGTTTTTTTACAACTTCAG GTTACTTAAGAAGCTAATAGCAATACGGTTTAGCGGAAGACTACAGAGTT GAATCTCCtttgtaggatttgaagccacttatttcctacaTAAGTTGCAC GGCCCGCatggttttcatacaaacgctGAATCAAAAGTATTACATTCACC gcaacaatttgaaaaataaaaaacgccAACGCAAAGGAAatgctacaatc agtgccataacatattggcaattttggctattttaccattttacaaaaat tgaagttcgagcgagattgtcaatttcgggccttcaacttgatttcatcg aatatttcgatctgggagggatttattggtttctaggctatatttcaagc cctaccggaccatttttgaacttttggatcctcagatcctaaggtctggC GTTAAAACtcaagagttaaaactctacctttccaacctaatttggagcac ttacaaatcgtttgtggttataaaatttcgtggggaatttcccttttgtg ccaagtattttggaacTGATTGTAGATTCAATCTGTATTCCGAAACGCAG CGCAGACCTTAAGgctttcactttttcttgtttaaaaaaaaggttgaaga ttcgcctctagccttcggcttgaaacacATGAttaataatacaccttttc gactgtagccgccgccaattgccgcgcaggGTTTTTTTTGCCCGTACCAG CCTTTTTTTTGCCCCTATAGACAATAgtaaaatgtgtcaaaaaaggattc gGTCGATTAAGGGGGATAAtcaaataattaagtggcacgcgactacggtc gaaacgATGTATTGTCAACTATTGCCTGCTGCTATTATGGATCATAATGT TCTGTTTAaccaaaaatataaacaaattgaCATCATACAACCTCCTTCTT TCATAACGTTAACTAACaccactttcatttttcaagttCTTCAAAAATCT ACCAACAAACTTCTTCTTTTTTACTTTCGACGGTTATTTCCAGCCATAAT CATAGCAATTcgaatgaaaatgttgatagtATCCATATAAATACCGATCG AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045253XLOC_045253Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072945-exon-scaffold_86-1491911889:1133088..1133118TCONS_00072945-exon-scaffold_86-1491911889:1133088..1133118Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1133088..1133118TCONS_00072945-exon-scaffold_86-1510915933:1133088..1133118Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1133088..1133118TCONS_00072945-exon-scaffold_86-1575043694:1133088..1133118Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1133557..1133636TCONS_00072945-exon-scaffold_86-1491911889:1133557..1133636Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1133557..1133636TCONS_00072945-exon-scaffold_86-1510915933:1133557..1133636Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1133557..1133636TCONS_00072945-exon-scaffold_86-1575043694:1133557..1133636Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1142431..1142608TCONS_00072945-exon-scaffold_86-1491911889:1142431..1142608Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1142431..1142608TCONS_00072945-exon-scaffold_86-1510915933:1142431..1142608Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1142431..1142608TCONS_00072945-exon-scaffold_86-1575043694:1142431..1142608Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1143716..1143774TCONS_00072945-exon-scaffold_86-1491911889:1143716..1143774Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1143716..1143774TCONS_00072945-exon-scaffold_86-1510915933:1143716..1143774Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1143716..1143774TCONS_00072945-exon-scaffold_86-1575043694:1143716..1143774Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1144037..1144279TCONS_00072945-exon-scaffold_86-1491911889:1144037..1144279Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1144037..1144279TCONS_00072945-exon-scaffold_86-1510915933:1144037..1144279Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1144037..1144279TCONS_00072945-exon-scaffold_86-1575043694:1144037..1144279Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1144726..1144956TCONS_00072945-exon-scaffold_86-1491911889:1144726..1144956Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1144726..1144956TCONS_00072945-exon-scaffold_86-1510915933:1144726..1144956Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1144726..1144956TCONS_00072945-exon-scaffold_86-1575043694:1144726..1144956Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1145648..1145842TCONS_00072945-exon-scaffold_86-1491911889:1145648..1145842Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1145648..1145842TCONS_00072945-exon-scaffold_86-1510915933:1145648..1145842Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1145648..1145842TCONS_00072945-exon-scaffold_86-1575043694:1145648..1145842Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1146957..1147045TCONS_00072945-exon-scaffold_86-1491911889:1146957..1147045Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1146957..1147045TCONS_00072945-exon-scaffold_86-1510915933:1146957..1147045Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1146957..1147045TCONS_00072945-exon-scaffold_86-1575043694:1146957..1147045Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1491911889:1147252..1149639TCONS_00072945-exon-scaffold_86-1491911889:1147252..1149639Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1510915933:1147252..1149639TCONS_00072945-exon-scaffold_86-1510915933:1147252..1149639Clytia hemisphaericaexon
TCONS_00072945-exon-scaffold_86-1575043694:1147252..1149639TCONS_00072945-exon-scaffold_86-1575043694:1147252..1149639Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1133088..1149639 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0231821 0.0110663 0 0 0 0.00125924 1.21685 0.989929 1.03114 0.844849 2.59394 5.75339 3.2733 3.48545 3.029 7.20816 0.697798 0.507452 0.035713 0.0253446 0.548453 0.352956 0.405067 0.504497 0.00732531 0.290147 1.14853 0.710172 0 0.0265919
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072945 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top