TCONS_00072944 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072944
Unique NameTCONS_00072944
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3502

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072944 ID=TCONS_00072944|Name=TCONS_00072944|organism=Clytia hemisphaerica|type=transcript|length=3502bp
ataattatttgagcAGTGGGAGGTCAAAATGAAAACTTTATTTACATTTA
CCACCCTCACATTGGCGTTTGTATGTAGGTGGACATGGGCGGCAGATGAT
ATCGAATACCCTGATTTGACGAAATGTCCGATTCAAGTGCAACCTATGGG
ATGTTACAGAGATAAGGATACTCCCAATCGTGCTCTTCCTGATCAAATCG
CTAACAGTCGGGATCCTGGATCGACAGTTTTCATGGAACCGAATTTGAAT
AACCATTGGGGAAATTTTGCTGCCTTCTTGGCAAATTTCATTTGTCAGTG
TGCCAAGAAAGCGGCCAAAGAAAAACGTGGGCAATATATTGGTATTCAAT
ACTACGCTGAATGTTGGAGTGGAGAAAAAGACACAAGCGATCCTCAATCA
GAAGCCTATAAGAAGTACGGTGAAGCTAACGCGCAATGCATTGATAATAA
TTATGAAAAGTATGATGGATCTAAATCACCATGTGGTCTTNGCATTGATA
ATAATTATGAAAAGTATGATGGATCGAAATCACCATGTGGTCTTTATGCT
GGTACACAACTCACCAATTACGTCTACAAAATCACTGAATTGGACCAAGa
CGTTCTTTGCCCATTACATTTCAAACCAATGGGATGTTACAACGATAACC
AAGTTAAACCCAGACCTCTGCCAGATTACATTATGAACGAGCGTGACTAC
ACTCTACCCAATTGGAATGGTCACATTATTGATTGGAACGGATGGGACAA
ATACATGCCAGCGCTGATATGTCGTTGTGCGATGGCTGCTAAGAAAGGGA
ATTATAAATATTTTGGTATTCAATTTTATGGTGAATGTTGGGCTGGCAAC
GATGAAAAGGAATTAAAAAAGGATGGAGATGCGGATAAAGACAAATGCTT
GGTTAAACTTGGAGCTCCACCATACGGTCAATACTGTCCATCAAAGAGTG
AACAAGAAGGGATGTGCCATCCACAATTGTGTGTTGGTGTTCAGAAGACA
AACTATGTCTATGAAATGTTACAAGGCCCTGGACCTTGTTCCAAAAATCC
ATGCAAACCAAACGAGAAATGCATTCCCAACCCaagtttgaaagaaaaat
tcaaatgtgAAGAGTCcccttttgaagaaaaagaccCCGAAAAGAAGCCG
GAGGACGACCCTACAAAACCTCCATCGAATAACGAGCCCTCAAACGAAAA
GCCCGTGTCTATTGAACCGAAAGACGAAAAACCCACATCCACTGAACCGA
AAAACGAAAAACCTGCACCTACTGAGCCCTCGAATGAAAAGCCCGCTTCC
ACTGAACCAAAAGACGAAAAACCCACATCCACTGAACCGAAAGACGAAAA
ACCCGCATCCACTGAACCGAAAGACGAAAAACCCGCATCCACTGAACCGA
AAGACGAAAAACCCACATCCACTGAACCGAAAGACGAAAAACCCGCACCC
ACTGAACCGAAAGACGAAAAACCTGCATCTACTGAGCCCTCGAACGAAAA
ACCCGCTTCCGCTGGGCCGAAAGACGAAAAACCCGCATCCACTGAACCGA
AAGACGAGAATCCTGCATCCACGGAACCGAAAGACGAAAAATCTGAATCC
ACTGAGCCGAAAGACGAAAAACCCGCATCCACTGAACCGAAAGACGAGAA
TCCTGCATCCACGGAACCGAAAGACGAAAAATCTGAATCCACTGAGCCGA
AAGACGAAAAACCCGCATCTACTGAGCCTTCGAACGAAAAACCTGCATCT
ACTGAACCGACAAACGAAATACCTGCATCTACTGAAACGAAAGACGAAAA
ACCAACATCTACTGAACCGAAAAACGAAAACCCTGCATCTATTGAACCGA
ACAATCAAGACCTAAATAAATATAATCCGCAACCAACGCAGGGAAACAGA
ATGCCACTTTGCTGTAATACAAACACTTGTAATAGAGTAACAAAATCGTT
ATGGTGTCATAAAGGCAAAATGTAAGCATAACTCAGAAAGATTACACAGT
TGTCATGATCCTGAGTGAGAAAATATGGCAAGAACTTTTATTgcaaaatc
atttttatttttaggcagttAAGTAGTATTTGCAAAACATTTAACTTGTA
CATAAATACACAATCACATTCGAAAAGCTTTCGAATTTTAGTATCATCTA
AATATCGAggattgaaaaaagtttgtttcacTTGAATTATTTCCATtgtt
cttctttaaaaaaaaattaattttgcaatattataaaatttcaaatttat
aaatattCTCTGTTATGACGTTTATAAGTTCGCATTTGTATGCAAATATT
ACTCCATTTTAAAGGACTTCCTAAGTAAAGCCTTCGGAAATGttggaatt
tgaatttttaattttgatgaatgtCTACATACAATGTATGTCTTATATAC
ATTATAAGGAGAATGGGTTCAAGTTGATCCAGGTTTTTTTACAACTTCAG
GTTACTTAAGAAGCTAATAGCAATACGGTTTAGCGGAAGACTACAGAGTT
GAATCTCCtttgtaggatttgaagccacttatttcctacaTAAGTTGCAC
GGCCCGCatggttttcatacaaacgctGAATCAAAAGTATTACATTCACC
gcaacaatttgaaaaataaaaaacgccAACGCAAAGGAAatgctacaatc
agtgccataacatattggcaattttggctattttaccattttacaaaaat
tgaagttcgagcgagattgtcaatttcgggccttcaacttgatttcatcg
aatatttcgatctgggagggatttattggtttctaggctatatttcaagc
cctaccggaccatttttgaacttttggatcctcagatcctaaggtctggC
GTTAAAACtcaagagttaaaactctacctttccaacctaatttggagcac
ttacaaatcgtttgtggttataaaatttcgtggggaatttcccttttgtg
ccaagtattttggaacTGATTGTAGATTCAATCTGTATTCCGAAACGCAG
CGCAGACCTTAAGgctttcactttttcttgtttaaaaaaaaggttgaaga
ttcgcctctagccttcggcttgaaacacATGAttaataatacaccttttc
gactgtagccgccgccaattgccgcgcaggGTTTTTTTTGCCCGTACCAG
CCTTTTTTTTGCCCCTATAGACAATAgtaaaatgtgtcaaaaaaggattc
gGTCGATTAAGGGGGATAAtcaaataattaagtggcacgcgactacggtc
gaaacgATGTATTGTCAACTATTGCCTGCTGCTATTATGGATCATAATGT
TCTGTTTAaccaaaaatataaacaaattgaCATCATACAACCTCCTTCTT
TCATAACGTTAACTAACaccactttcatttttcaagttCTTCAAAAATCT
ACCAACAAACTTCTTCTTTTTTACTTTCGACGGTTATTTCCAGCCATAAT
CATAGCAATTcgaatgaaaatgttgatagtATCCATATAAATACCGATCG
AT
Run BLAST on NCBI

transcript from alignment at scaffold_86:1133080..1149639+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072944 ID=TCONS_00072944|Name=TCONS_00072944|organism=Clytia hemisphaerica|type=transcript|length=16560bp|location=Sequence derived from alignment at scaffold_86:1133080..1149639+ (Clytia hemisphaerica)
ataattatttgagcAGTGGGAGGTCAAAATGAAAACTTTGTAAGGTTTTC TTTCgtgtttctttttcaatttcttagAATTTCTATTTGTGTTTTTATAT ACACTGTAGTCAGAatagaacacccccttctcacagacctggtaggattt tgTTTTTGCCAGGCGGAgcaaaaataacggactgaaactcgattgaaatt gtttttttatgagtTGGGATTTCATTTTCGTTGTTCTCAAGTCAGACAAT TCAGtagggatggaaaaaaaatgcaatattttacaatgagaatttgttta tttgattattttcaatggggacaaaaatcggagtataattttctaccggg acgatattttgaccaactGCTCCATTTCGTAGTAaggggttccagtgggt ctgaAAAGGCGTGTGTAATAGAGGTTAAATTAAGGCCACGAGATAGCGCA AGTTTAAATGCTTCTCTGATATTTTAGATTTACATTTACCACCCTCACAT TGGCGTTTGTATGTAGGTGGACATGGGTGGCAGATGATATCGAATACCCT GACTTGAGTAAGTTTTGTGAGTTTTTGAAAGAAGAAGAATGTTAAGCAAA AAGTAAAAACCGACGAGTTGATTTGATGCAATGGTATACGTttattttat tagaacatccaagccttcggatgttcttaacttttttaggttTAAGCCTA AAGATATTCTTACGGTGTtcttttaccattttgtgagctgctttttttgg aatttcttaagaaatcgggtgttctAGAATTTGccgagccttaaaatgtt tttaatttagaTATGTTATCCTCCTTTTCTGAGGAGCCTCCTCAGGAAAA TTCTCAAGGTGACTTTATGAATGATAActgcatgaacatataaaccaCTG GACCTTTGTCTTCTATTGTGTCTTTCGATTTTGTGGTCCATTTTAGGGGT CCATTTTGTTGTCAACTTTTATTATCTCNtgctctattataaaaaagaat tttcattttgtaaacaatcctcctatattgttggaatattgcaaatctag ctgacaatatattgcggacacctctTCAATATATTGCGAGCATTAAGCAA TATATTATCAATATAAgattttaacttgttcttaacattttggccatcga agcccttatatatagtttgttcttacaaaaaatctGTTATTTTAAGATGT TTTGAATAAGTTAGcagtaatatattttttatttcttagatTTCAGAGAA CATTTGAAATTCCCTGATAAGATATTGGTTTATGGGGCGTTGCCCTTTGT ATTGCCGCAAAAGAAGCTCCTTGGATTTTCTCCTAAACATGCGACTGGCC CCTAGATATGTTATCCTCCTTTTCTGAGGAGCCTCCTCAGGAAAATTCTC AAGGTGACTTTATGAATGATAActgcatgaacatataaaccaCTGGACCT TTGTCTTCTATTGTGTCTTTCGATTTTGTGGTCCATTTTAGGGGTCCATT TTGTTGTCAACTTTTATTATCTCCCCTGTAAGTCGAGTTAGTCAATGTTC AAAGTGTTTAAGCGCTTACAAAACAACATTCTTTGTTGTTATTGTCATCA GGAAAAGAGACTATGGCATTAATATGGTGTGAGGGGCTTATCTAATCAAT GGTTTCGATCTTATCTTACAGACCGACAACAAAACGTCTCTGTTTCTGGC GTGGACACTTTTAAACGCCCTGTTAATCACGGAGTTCCTCAAGGATCTGT CCTTGGACCTATTCTCTTTCTGATCTTCATTATGTTCTTCAAAATAGTCA AACGAATctttttgctgatgataccTGTCTCCTCTCCTCTGACTCTGACC TTCAGTCTCTAGAAACCAAAGTCAATTCTGATCTTACACGACTCTCCTCT TGGCTCCGAGCAAATAAAATCTCACTCAATGTATTGAAAACAGAAGTGTT GCTTACCCGTTCCCTATTCAATGAAGTTAAAGCTCGATGACTTCGAACTT AAACTCTTGACTTGCGTAAAATACCTTGGGCTATTTCTCGATGAATTTCT AACCTGGAACTCTCATTTTGACCATCTAGCAAAAAGACTTGGCAGGGCAA ATGGCATACTTGCTAAGCTTCGTTATTTTGTTCCTGTTTCTGTCATAAAA ACTCTTTACTATGCTCTTTTCCATTCACATATGTAATATGCAAACATCGT CTGGGGTCAACGATTGACTCAACCAACCTAATTATATTGTAATATTCACA TAGTCTGgcagaaataaaagttgaccTTGAAAAAGATTCCGCGTAAACTT TCTTTGTACCGTTGGAAGTGGAATTTTATGAGGTaaacatactcagagcc tcacgtCGAGGCCCTTTGGGGGGGGATATTGGTGAAATAAAACATTAAGG ACTCATCTTCGCTATAAAATGCCTACAAAAGTGCTATCCTTGCAATGGTA GGTGTCTTTTAAAACACTCAAtctatacccctgtctcaaaaatctAGGGG GGGGGTACCCAATAAACATTTCTGAAAACCACAATCAATTAAACAGTGTC ATCCATCATATGAAATGGGTCAAGTGCAAGGCAAAAGCACATGGTGAGAG CGCTGCCTTTCAGAGATTTTGAATAGCTTTGATAGGTTTTTATTGTAGCT GATAACCAGTACAGTGCTCAAAAACGTATCTTTTTTGGGGCAAAGAAGTA CATTCAGGCTTGATTTTACCAAAAGCTTTCCCCAAGGGCCTCATcatgag gctctgagtatgatAGTCTACATAAAATTCCGCATCCAACGGTACAAAGA AAGTTTACGCAGATTTTTTCTCTACGTTCACCCCTGTTTTATTGTATTTC AGCCAGACTAATTCTTTTATCTTTCAAATCCAAACTTTTAGTAACACTAT CTCTCTAACAAAATTTTACCTGGAGAttaattttgtgttttgatttacgg taaacaaacaaaaaattatatatccGCGTTGTCTGAAGAACCTTGAGAGG GAACAAAGATGTGAAAAATATTATAGTAGAAACTTTATCATATTTTCTCC CAAAACAAATAAGAAATTACAAAGAGTGGTGTCCATAAATGGCATAAATC CTCTCCAGACGAAAAAGGGCGTGTACAACTTACAAATTATGAATTACAAG TGAATAAGAAAGCAACAAAAATTACGTTCAATATAATTAACTCTCTATAA ATGAtcctttttataatatattttttagaaaatagaCAATTCCAAACTTC AAACAGTTATATTTCTGGCTCTTGAAGTCCTAGAAGGCTTGTTTGATTTC AAAGAACCTTTTTTGTTAAAACTCCTTCGGCACTGCAGATCTTCATTTTG TCAATAGACATTTTCGGCTATGCGTGCATACATGCCCTTATCACGATCCT TACGCGCCCTTctcagaaattgaaaatttgacccaATGGAAGTTCAATGA AAGTTTACCTTTCAGAGGCTCCTGTGACCTGCATTTGGtttcaaaaacta ataaattggGTACAAGTGAACGTAGAATTTCATAGAGATTTCGAAAAAAC ACTAACAAAATCTAGTCGGTAACGAACGTGTCAAAGGATCAGTTACCATA AACATATGGAACAAAATCAGTAAAAGTTTCTATATACGTCGCACTTTCAT TTCGACGAAGGTCGGTTGAATTTTTTAACTNTTTTCGGCTATGCATGCAT ACATGCCCTTATCACGATCCTTACGCGCCCTTctcagaaattgaaaattt gacccaATGGAAGTTCAATGAAAGTTTACCTTTCAGAGGCTCCTGTGACC TGCATTTGGtttcaaaaactaataaattggGTACAAGTGAACGTAGAATT TCATAGAGATTTCGAAAAAACACTAACAAAATCTAGTCGGTAACGAACGT GTCAAAGGATCAGTTACCATAAACATATGGAACAAAATCAGTAAAAGTTT CTATATACGTCGCACTTTCATTTCGACGAAGGTcggttgaatttttttaa ctgtCAACCCACATGATATCTCCCCCTTTTTTAGTGAACTTGTCCCGACC TGTTAACAGCGTTGTGTCTAGCAACTGTAAAACCACCAGCCTACTTTGTT ATAAGAATGTGAGCATTGTTCACCACTCTTATCGTTGTCAGAATCATAAG TTTAAAATTTCATACCATTGTGATATGTTTTAAAGGCGTATCATGGCTTG TCACATTTCCTGTCGCACCAGTCAGGGTCAATTGATATTTGCACAAACAT TTCTGAAAACCACAATCAATTAAACAGTGTCATTCATGATATGAAATGGG TGAAGTGCAAGGCGAAAGCCCACGGCGATAGTGCTgcctttcaaagactt tgaatagcTTTGATAGGTTTTTATTGTAGCTGATAACCAGGACAGTGCTC AAAAACGTATCTTTTTTGGGGCAAAGAAGTACACTTCAGGcttgatttta ccaaaagttttctCCAAGGGCCTCATCATGAGGCACTGAGTAtgataatc tacataaaattccgcttccaacggtaccaagaaagtttacgcggAATTTT TTTCTACGTTCACCCCTGTTTTATTGTATTTCAGCCAGAATAACatattg taaattttagtttaaattttgcaggcaaataaatcatttttgaatattga attgaattgaattgaattcttTGGTTGCATGAGGTACGGTGGGCCCAGAC TACCTAATTATATCTGTTTTGTACATGACCCTAAGAAACCACCGTACCTC ATGCAACCaaagtataagaaagccgcggctggaatatgtaccgcattgtc ttttcagttaatctccgagctttataagaacatcaagatgctcagtttat tattattttccttcacaaaaagtttttttgttgctagatatctttgagtc tgtacccaatagaacacttgaactaattttggacatattttaggggtatt ttgtagaaacaatagtttttcgccaaaattgaaattataagaactataNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNattcaagatgacaactttcctgtcagtttaaat gataaattttgaaggtgctggcttgaaattttcacagtattatcttgatg tactttttcattgattcctaaaaagatttcactgaattattgtgaaggca tttcgaggcacctcattagcttttgagttctttcagcccagctattttgt gcttgtttgaatttcttagtgttgatttttcctttacaatgattttataa tgcaagtgtattatcaagggcatactattaatgtctaaaacgcactgaca agtaagtattaacgacaaagcAATAAAGTTTAcaattaaagatgctacat tactgatttcttgatcaacaaagtcatcaaatacgacagagatagaacaa cagaaaatcaaatggtatcattccagccgcggctttcttatactatgatg cAACCAAAGAATGTTGTTTTGTAAGCGCTTAAACACTTTGAACATTGGCA ACAATGAAACTCAAGCTCTGTATTACTCGGATTTTTCGAGAAACGATTAt actgtacagggtgtccctaattaaagtaccgagtttgaacatgcgattga gtagaaaagtttgtgtgtgttatcgctaaaatataagaacgttctccatc acacaggcttattacaaaaggtagttacaacgtataaattaatcgtaatg acaaagaaaaaagagggagaatttaaaatacaattttgtgaacacgcaca taaaactttctactcaatcgcatgttcaaactcgatactttaattaggga caccctgtaaacACTCTATTAAATTGTAttaggatttttattttcaaaaa gtttcctaCCAATCTTTGGGGGGAAAGTCAGTTTGGACAAAATGCTATAA AGGTATtatataattttgaaataacttttCCTGAAGACCCtgcaatgtta ttttttgtaaGAGCAACGGAACtccagtttaaaaaaaaattattttcaac tgaggattgtttgtaaaaacatgaaactgccagtattgaaaaaataattt tcattactttaacTACGAAATAACTTTTCCTGTATTTTTCGTGATGTTAT ATTTTATCTGGAAAGTGCGACTTTTAAAACCATTGTGTTTTGTACATTGG TGTTTCAAACAGTTTTCTCAAATAATACACAAACATGCTTTTTGTGCATG GGTTGAtcccaaacaataaaaaatagttCAAAACATTTTGAGATTTGAGC GGTcgaatttatgaaaataattatttgagcAGTGGGAGGTCAAAATGAAA ACTTTGTAAGTTTTTCTTTCgtgtttctttttcaatttcttagAATTTCT ATTTGTGTTTTTATGTACAatgtagacgatgctatcgtccgtataatatg ttattatgatataacatagtttgtatattatataaaacgtaatatgtttc gcggcggatagagtctgtgtttacagctactcccgtaaaaaattcccgtc tcacgtttgttcctcttagataaaactcgtcttagactatagcatagtct atgtACAATGTAGTCAGAATagaacaccccttctcacagacctggtagga ttttgTTTTTGCCAGGCGGAGCAAAAATgaaagcatccaacgaggacctt tttttaaatatctgtttcccagacatagcgttcctggaaaatttgatctg ttggccgaatatttcaaaaatcttattcctagaaatgaagatttgtttct ccgcaaaacctaaatttttaatctcaaagtatctttcctagaaaatttga tctgtttccacaattttcagaattaaaaatctaatctgttttcccaaata ggatatctgttcccctctcctggaaattttcatctgtttccctttctttt tgttattgatatctgtttcccccataaagttcaatctgtttctccagggg aataaggcgggttcgtggaggtcaaaactcttgcaacgttacaaatcatt ttcagaagctcgttttgggctcaaacgaagcgtataactaattagaataa gattcagtcgaggcagatgttttttcattttgaaattttgcgtaattcgc aaaaatcctcaactTTGCGCtatcttgatgacgtcataaaaattgaaatt caaataacttttgatagaatcatcaaaataatttcaaacttttaccaaag atgcatttcaatgcaaattttcaaaacatttcaaaaaattttcaaaatct tgatgacgtcagcattttttaaggtttttagttttttgcctgaaaattga tgacgtcatcaaatttcgttaaattttttctttaattctGAAAAGATtaa taatatgcatctttggtcaaaatttgaaattattgggatttcaattttta tgacgtcatcaaaatagcgcaaaattgaggatttttgcgaattacgcaaa atttcaaaatgagaaaacatctgcctagactgaatcctaTTCTTCTTAgt catacgcttcgtttgagcccaaaatgagcttctgaaaatgatttgtaacg ttgcaagcattttgaccccgccttaatcccctggagttccaatgcaatat catcttttttggaaacagatatctatttcccaatttattatctcatctcc tagaaatattgatccgTTTCtcgctgatgacgtcatcagctggagcgggg aaacagatagttttaaggaaaaggtctctcctagaaaatcggatctgttt cctcaattttcaaaaaaagctctctcctggaaaagggaaacagatatttc gggaaaatgggctcgttggctgcttctgcaaaaataacggactgaaactc gattgaaattgtttttttatgagtTGGGATTTCATTTCCGTTGttctcaa gtcagaaaattcaatagGGATGGAAAAAAATGCAATACACtcatttcttt ttataagcatgtactgaagctcaaatttccaaaaaaattaagcgctaagc ataccttgaggctcagccaaagtAATatttagaatcataatttccaaaac ttcagaCAACAACAACATTctaaaacaatagaatgtcttcatttctctca agattaaagagaggggaaaatgcgcgaaaattatttaccccccccccccc cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNGAaaattttttcccccccccccctc cttcataatttttttaccaagcatagggttaagcataagTCGAgactcaa aattgagctttacttaagcataatgagcttcagccgaaatttaccgtatg cttataaaacaaaatgagtgtattTTACAATGagaatttgtttatttgat tattttcaatggggacaaaaattggagtataattttctaccgcgggacga tattttgaccaactGCTCCATTTCGTAGTAaggggttccagtgggtctga AAAGGCGGGTCTAATAGAGGTTAACTGAAGGCCACGACACAGCGCAAATT TAAATGTTTCTCTGATCTTTTAGATTTACATTTACCACCCTCACATTGGC GTTTGTATGTAGGTGGACATGGGCGGCAGATGATATCGAATACCCTGATT TGAGTAAgttttgtaactttttgaaagaaaaagaatgttaagcaaaaagt taaaaccgACGAGTTGATTTGATGCCAtggtatacgttttttttattaga acatccaagccttcggatgttcttaactttttgaggttTAAGCCTAAAGA TATTCTTATGGTGTtcttttaccattttgtgagctgctttttttggaatt tcttaAGAATTCGGGTGTTCTAGAATTCGccgagccttaaaatgttttta atttgctcttaacattttggccatcgaagccttatattcctATAAAAGAA AGCGTAATTGGGAAGATTTTACGCATAGTGTGCAGTTAAaacgaccaaga aaatttttacGGCATACAGTTCCAGATGAAGCTTTCCATTTTGCTAGGAG CACCCATTTATTCAATCTTTATTCAACGTTCTaccattcgatacgctcca ttattcgatattAATGAAagccaccgtcaacaagaaacactCATTATTGA CGCTCTAACATCcaatacgctcccttattcgatgatatAACCTAACCCAG TTAAACATCGAAATAGAGAACGtcaattgtatatttttacgGTATTTTCA GCGAAATGTCCGATTCAAGTGCAACCTATGGGATGTTACAGAGATAAGGA TACTCCCAATCGTGCTCTTCCTGATCAAATCGCTAACAGTCGGGATCCTG GATCGACAGTTTTCATGGAACCGAATTTGAATAACCATTGGGGAAATTTT GCTGCCTTCTTGGCAAATTTCATTTGTCAGTAAGTGTTCTTATGATTGAA GTTTTACACTCTCGTAGGGATACCCTTCACATTTTTTATACTATTCTGGC TCGTCGACTTTGTGTAGGCCCCTTTCTAATTCAAAAgtttgttgaaaata tttgccctcgggtaagttatggcatgtctcaaaaaatgaaaatcaccata atttttagatcgcattagtcgacagaaaatgaccaaacaaatgactgaac atgaagggtactatgatgtagtttctagcctgatgtgtaacctaattgtt ttctcgctaatTTACGcgaaaaaccacaaaaactgattattacgtcataa tcgatgacgtcatcaaaactgaaaattgaatttctcgagaATGGTTCATC CAATTGTcctcaaattttcaccaaagatgcatctcaCTAAAGTcgaacat ttgaaaaaatattttcttcaaaattctgattacgtcagcaaaaagtagaa tttttcgttttttactaatttctgctgacgtcatcaaactttcgaaaaaa aatttttccaaaagattGACTTTGGTGAGATCAAGGAGGTGGAGACGTCC TTGGTGAGATATATCTTTGgtaaaagtttgaagacaattggatgaACCAT TCtttagaaattcaatttttagttttgatgacgtcatcgattatgacgta ataatcagtttttcgcgaaaatcagtgaaaaaacaattaggttacacatc aggttagaaactacatcatagtacccatcctgttcagtcatttgtttggt cacttctgtcggctaatgcgatctaaaaattatggtaattttcagacatg ccataacttacccgagccGTAAtattattgagaaaaaaaggaaggtccct gaaaattttcaagtgcTAAAACTTACTCATGGTATGAAAAGCTTTCACTG ATGAATTTTAACATTAGATGAAACACTTATAAGtgtaggatctcaggatc taaaagctcaaaaatattccaataaGACTTAGATGAATATAGCCTGgaat ttcgaccatgattgtagtacaTTAGTTTTTACTAGCTAACATACATGCCA TATCAAAATAAAGAATTCTTGCCTTTTTTCTTTCAGGTGTGCCAAGAAAG CGGCCAAAGAAAAACGTGGGCAATATATTGGTATTCAATACTACGGTacg aaaaaatatgttttataCACAATTAAACGGacagttagtttgttgtgata ACACAAAATCTGCAACAACCTTTAGTTTCTTCAAGGGTATGTTTAGAAGA GAACTTATTCACTGAATTTCCAAAGAAATTGCTCCATTTGAATATTAATA TATGGTTTTCCAAAACATGACACTAGTATACCAAACAATCCTTCGAGAAC AGTAAGTTTAGAGTGGAGttacaaattcaaaaataataaatcttTCTATC GTAACAGCTGAATGTTGGAGTGGAGAAAAAGACACAAGCGATCCTCAATC AGAAGCCTATAAGAAGTACGGTGAAGCTAACGCGCAATGCATTGATAATA ATTATGAAAAGTATGATGGATCTAAATCACCATGTGGTCTTNGCATTGAT AATAATTATGAAAAGTATGATGGATCGAAATCACCATGTGGTCTTTATGC TGGTACACAACTCACCAATTACGTCTACAAAATCACTGAATTGGACCAAG GTAACTCAGGATTTCGTACCCAAcccaatttttgattttattgaaggTAG TAGTGCAATCGTGTACAATTATGGTACAACTTGTAACTGTGAGCAATTGT CTGGTAAAACGGTAAAAATCCGAACTAAAGAGATGAGTCTTGGTTAACCC TGCTAATTTTTCCAAAGAGGCTATAACTATTTGATATCTGAGCTGtaaat aaaagaatttgaaatgCTTATCTGTTAGAAAAACTAGAGATTAATCATCT CTTTTAGCAGTTAGCCCCTTCATTCAATATCATATCCACTCCACTTGCTA AGACTTCCTCGCCTGGTCACAGGGACATGAGATACAAATTGACGAACCCA TTCCTTGAGCTGCAGCtatggattaaattttgcgatatCTTTATGATAGT TTATTGAGAATTAATGAATGTTTTGTACGttacttttaatttttagaCGT TCTTTGCCCATTACATTTCAAACCAATGGGATGTTACAACGATAACCAAG TTAAACCCAGACCTCTGCCAGATTACATTATGAACGAGCGTGACTACACT CTACCCAATTGGAATGGTCACATTATTGATTGGAACGGATGGGACAAATA CATGCCAGCGCTGATATGTCGTTGTGCGATGGCTGCTAAGAAAGGGAATT ATAAATATTTTGGTATTCAATTTTATGGTAAGCAAACTTTTTAGGCCTTC TATTGTCATATCATCAATAAATCTTTTCTTTGTCCCTTAAAAagtatata tacagttgacgctctctaattcgacgttctacgtctactattcgataggc tccctttttcgatgaaatttaaagtccccgtcaacaagaaactcacacaa acgacgctcccttattcgataagctcctttattgggctcttccagaaaaa atccgttcatggggggtggaggatgaattgtccaggggtattgaaaaaat accaaaaaattgcaatgtccaggggggtaaattccaatgtccaggggtaa ttttttgtgtccacggggttgatttgatgtttgtccaggggtataaccca tgtccagggggttaaaaatcgaaatgtccaggggtaattcatgaaaaaaa aaaatatatcctccacccccatgaacggtttttttctggaagagcccatt cgatgaaaatccgattccccttgaagatcgaataagagagcgtcaactgt atatattaatgtatttttgaaggaaaataggGAACTCAAAGTGGGATTAA TTGTTTTCAGACTCGAAGGTGAAACTTatcattgtaattttttttaaatt cttccaAAGCTTAAATTGGTTctggcttaaaaaattttggattaaaATCT ATGATCTTTTTCCCAAAGGTGAATGTTGGGCTGGCAACGATGAAAAGGAA TTAAAAAAGGATGGAGATGCGGATAAAGACAAATGCTTGGTTAAACTTGG AGCTCCACCATACGGTCAATACTGTCCATCAAAGAGTGAACAAGAAGGGA TGTGCCATCCACAATTGTGTGTTGGTGTTCAGAAGACAAACTATGTCTAT GAAATGTTACAAGGTATTTAGTCATCTGCTCGTCCTCTGAACGAAGAATA GAGGAGTTTAGCAAATCATATACAAGGGTATTAAATGCAAAATGATTGTT TCTTTAACAGTTCATAGAAcgcgagaaaattcacttcaaagaggggACTT TTTTCTGAGACACACGGTATTTGAGCATTTTGGGCcttcaaacaaatttt gaaatgtttttatgtttaagtaactTAAATGGAATCTCTTTAAGTCGAAC ATGCAATCGGAACAAAATTCTTTTAGAGCTTTGGTGACAGACTTCcaaat tttttatatataaaaggTGCCATTCTGGTGCCATATAGTAGGGGGTCAAG CCTTGGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNcaaaaaatgtattacaacaactctctg actaaaacacacaaagaaatacagccgcttgaagttcaaaaacataccga cgtcagcACGAccaagacaagatttgacgtcaaatcacagtagagctgac agttagttggtcttaaacCGGCTGTATTCCTTTGCGTGTTTTAGtcagtt agttggtcttaaacCAGCTGTAttcctttgtgtgttttagtcagagagta gttttttgctcagaatttcatgctctatcagatggtaccaatcattttcg tttattttgaagTTCTCAAGCACAGGAGACGACTCTATTCCCATTTAGTT ATAAGATATTCAAGAGCAATTCTCTCCTCTATATCACTGTTTCACAGAGC TGCTGGGACTTCTTTTGAACTGCTCATTAAACTGTACAGTAAAAAAGATG TCCAATGGAAATCTCtgaaattttggcaaaagaaGGTACCATTGAAATTT CACAAAACTGGAGATAATGACCTCCTCAGAATGAATAGTCCATTCCAACT ATGGAAACTATCTCATTTTATCACTGACCTGATTTGCGAAAGAGGCTtta atgaaattctttttttctcaattctAGGCCCTGGACCTTGTTCCAAAAAT CCATGCAAACCAAACGAGAAATGCATTCCCAACCCaagtttgaaagaaaa attcaaatgtgAAGAGGTCaaagaataattttatttgaaagcatAAATCG GGTTTTGTAACAACCATTACTGAAGAATTTTCAGAGTACTAACTTAGTTT GTAATTTGTATTTGTTATAGTTCTTTATTATTTTGTGAATTtaacatgaa aaaaaaacagtatgaaATCTACAATCAAATGCGtgcatatttcaattttt ttttgtttacttactCTTTTAGTCcccttttgaagaaaaagaccCCGAAA AGAAGCCGGAGGACGACCCTACAAAACCTCCATCGAATAACGAGCCCTCA AACGAAAAGCCCGTGTCTATTGAACCGAAAGACGAAAAACCCACATCCAC TGAACCGAAAAACGAAAAACCTGCACCTACTGAGCCCTCGAATGAAAAGC CCGCTTCCACTGAACCAAAAGACGAAAAACCCACATCCACTGAACCGAAA GACGAAAAACCCGCATCCACTGAACCGAAAGACGAAAAACCCGCATCCAC TGAACCGAAAGACGAAAAACCCACATCCACTGAACCGAAAGACGAAAAAC CCGCACCCACTGAACCGAAAGACGAAAAACCTGCATCTACTGAGCCCTCG AACGAAAAACCCGCTTCCGCTGGGCCGAAAGACGAAAAACCCGCATCCAC TGAACCGAAAGACGAGAATCCTGCATCCACGGAACCGAAAGACGAAAAAT CTGAATCCACTGAGCCGAAAGACGAAAAACCCGCATCCACTGAACCGAAA GACGAGAATCCTGCATCCACGGAACCGAAAGACGAAAAATCTGAATCCAC TGAGCCGAAAGACGAAAAACCCGCATCTACTGAGCCTTCGAACGAAAAAC CTGCATCTACTGAACCGACAAACGAAATACCTGCATCTACTGAAACGAAA GACGAAAAACCAACATCTACTGAACCGAAAAACGAAAACCCTGCATCTAT TGAACCGAACAATCAAGACCTAAATAAATATAATCCGCAACCAACGCAGG GAAACAGAATGCCACTTTGCTGTAATACAAACACTTGTAATAGAGTAACA AAATCGTTATGGTGTCATAAAGGCAAAATGTAAGCATAACTCAGAAAGAT TACACAGTTGTCATGATCCTGAGTGAGAAAATATGGCAAGAACTTTTATT gcaaaatcatttttatttttaggcagttAAGTAGTATTTGCAAAACATTT AACTTGTACATAAATACACAATCACATTCGAAAAGCTTTCGAATTTTAGT ATCATCTAAATATCGAggattgaaaaaagtttgtttcacTTGAATTATTT CCATtgttcttctttaaaaaaaaattaattttgcaatattataaaatttc aaatttataaatattCTCTGTTATGACGTTTATAAGTTCGCATTTGTATG CAAATATTACTCCATTTTAAAGGACTTCCTAAGTAAAGCCTTCGGAAATG ttggaatttgaatttttaattttgatgaatgtCTACATACAATGTATGTC TTATATACATTATAAGGAGAATGGGTTCAAGTTGATCCAGGTTTTTTTAC AACTTCAGGTTACTTAAGAAGCTAATAGCAATACGGTTTAGCGGAAGACT ACAGAGTTGAATCTCCtttgtaggatttgaagccacttatttcctacaTA AGTTGCACGGCCCGCatggttttcatacaaacgctGAATCAAAAGTATTA CATTCACCgcaacaatttgaaaaataaaaaacgccAACGCAAAGGAAatg ctacaatcagtgccataacatattggcaattttggctattttaccatttt acaaaaattgaagttcgagcgagattgtcaatttcgggccttcaacttga tttcatcgaatatttcgatctgggagggatttattggtttctaggctata tttcaagccctaccggaccatttttgaacttttggatcctcagatcctaa ggtctggCGTTAAAACtcaagagttaaaactctacctttccaacctaatt tggagcacttacaaatcgtttgtggttataaaatttcgtggggaatttcc cttttgtgccaagtattttggaacTGATTGTAGATTCAATCTGTATTCCG AAACGCAGCGCAGACCTTAAGgctttcactttttcttgtttaaaaaaaag gttgaagattcgcctctagccttcggcttgaaacacATGAttaataatac accttttcgactgtagccgccgccaattgccgcgcaggGTTTTTTTTGCC CGTACCAGCCTTTTTTTTGCCCCTATAGACAATAgtaaaatgtgtcaaaa aaggattcgGTCGATTAAGGGGGATAAtcaaataattaagtggcacgcga ctacggtcgaaacgATGTATTGTCAACTATTGCCTGCTGCTATTATGGAT CATAATGTTCTGTTTAaccaaaaatataaacaaattgaCATCATACAACC TCCTTCTTTCATAACGTTAACTAACaccactttcatttttcaagttCTTC AAAAATCTACCAACAAACTTCTTCTTTTTTACTTTCGACGGTTATTTCCA GCCATAATCATAGCAATTcgaatgaaaatgttgatagtATCCATATAAAT ACCGATCGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045253XLOC_045253Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072944-exon-scaffold_86-1491911889:1133080..1133118TCONS_00072944-exon-scaffold_86-1491911889:1133080..1133118Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1510915933:1133080..1133118TCONS_00072944-exon-scaffold_86-1510915933:1133080..1133118Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1575043694:1133080..1133118TCONS_00072944-exon-scaffold_86-1575043694:1133080..1133118Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1491911889:1141753..1141832TCONS_00072944-exon-scaffold_86-1491911889:1141753..1141832Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1510915933:1141753..1141832TCONS_00072944-exon-scaffold_86-1510915933:1141753..1141832Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1575043694:1141753..1141832TCONS_00072944-exon-scaffold_86-1575043694:1141753..1141832Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1491911889:1142431..1142608TCONS_00072944-exon-scaffold_86-1491911889:1142431..1142608Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1510915933:1142431..1142608TCONS_00072944-exon-scaffold_86-1510915933:1142431..1142608Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1575043694:1142431..1142608TCONS_00072944-exon-scaffold_86-1575043694:1142431..1142608Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1491911889:1143716..1143774TCONS_00072944-exon-scaffold_86-1491911889:1143716..1143774Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1510915933:1143716..1143774TCONS_00072944-exon-scaffold_86-1510915933:1143716..1143774Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1575043694:1143716..1143774TCONS_00072944-exon-scaffold_86-1575043694:1143716..1143774Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1491911889:1144037..1144279TCONS_00072944-exon-scaffold_86-1491911889:1144037..1144279Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1510915933:1144037..1144279TCONS_00072944-exon-scaffold_86-1510915933:1144037..1144279Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1575043694:1144037..1144279TCONS_00072944-exon-scaffold_86-1575043694:1144037..1144279Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1491911889:1144726..1144956TCONS_00072944-exon-scaffold_86-1491911889:1144726..1144956Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1510915933:1144726..1144956TCONS_00072944-exon-scaffold_86-1510915933:1144726..1144956Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1575043694:1144726..1144956TCONS_00072944-exon-scaffold_86-1575043694:1144726..1144956Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1491911889:1145648..1145842TCONS_00072944-exon-scaffold_86-1491911889:1145648..1145842Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1510915933:1145648..1145842TCONS_00072944-exon-scaffold_86-1510915933:1145648..1145842Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1575043694:1145648..1145842TCONS_00072944-exon-scaffold_86-1575043694:1145648..1145842Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1491911889:1146957..1147045TCONS_00072944-exon-scaffold_86-1491911889:1146957..1147045Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1510915933:1146957..1147045TCONS_00072944-exon-scaffold_86-1510915933:1146957..1147045Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1575043694:1146957..1147045TCONS_00072944-exon-scaffold_86-1575043694:1146957..1147045Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1491911889:1147252..1149639TCONS_00072944-exon-scaffold_86-1491911889:1147252..1149639Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1510915933:1147252..1149639TCONS_00072944-exon-scaffold_86-1510915933:1147252..1149639Clytia hemisphaericaexon
TCONS_00072944-exon-scaffold_86-1575043694:1147252..1149639TCONS_00072944-exon-scaffold_86-1575043694:1147252..1149639Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1133080..1149639 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00095791 0.000508926 0 0 1.10848 0.954743 0.0681482 0.0385855 0.574791 3.33792e-09 2.25888 0.000489269 0.0443302 2.23911 0.000968726 0.229908 0.18811 0.0972499 0.001784 0.000971205 0 0.198461 0 0.0746603 1.1827 1.79329 0 0 0.0440608 0.00158647
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072944 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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